EY680100

Overview
NameEY680100
Unique NameEY680100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12
Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 3
Query:   45 QFFLSLELEDLDRMLFGSEQAICVEDWKAHTEY-NGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL-----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRI 410
            Q F   ELE    +L      I V DW  +TEY +GY+  D  I WFW++V ++  E+R +LL F T    +P  GFA +          I       + LPTS TC   L  P YPS  ++ DRL +
Sbjct:  774 QLFDEYELE----LLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLV 897          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HACE1_HUMAN (E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12
Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 3
Query:   45 QFFLSLELEDLDRMLFGSEQAICVEDWKAHTEY-NGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL-----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRI 410
            Q F   ELE    +L      I V DW  +TEY +GY+  D  I WFW++V ++  E+R +LL F T    +P  GFA +          I       + LPTS TC   L  P YPS  ++ DRL +
Sbjct:  774 QLFDEYELE----LLLSGMPEIDVSDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLV 897          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: SMUF1_DROME (E3 ubiquitin-protein ligase Smurf1 OS=Drosophila melanogaster GN=lack PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 6.523e-12
Identity = 45/153 (29.41%), Postives = 72/153 (47.06%), Query Frame = 3
Query:    3 KGFADILCNPRLQKQFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGLAS----------RLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQEHVG 431
            KGF +++ +  L+   F   ELE    ++ G   +I V DW+ +T          Q++WFW++V    +E R  LL F T    +P++GF  L             +H+   V P   LP +HTCF R+  P Y +  ++ D+L    +E  G
Sbjct:  912 KGFCELIPSHLLRP--FDERELE----LVIGGISSIDVNDWRNNTRLKHCTNETTQVLWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADV-PTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCG 1057          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HECW1_MOUSE (E3 ubiquitin-protein ligase HECW1 OS=Mus musculus GN=Hecw1 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12
Identity = 48/145 (33.10%), Postives = 73/145 (50.34%), Query Frame = 3
Query:    3 KGFADILCNPRLQKQFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNG-YKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGLAS----RLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQE 422
            +GF +++ + RL   F    +  +L+ ++ G+ + I + DW+ +TEY G Y +    I WFW  V     EQR  LL F T    +P EGFA L      R    +       LP +HTCF RL  P YPS +++ ++L    +E
Sbjct: 1459 RGFYEVV-DSRLVSVF----DARELELVIAGTAE-IDLNDWRNNTEYRGGYHDGHLVIRWFWAAVERFNNEQRLRLLQFVTGTSSVPYEGFAALRGSNGLRRFCIEKWGKITSLPRAHTCFNRLDLPPYPSYSMLYEKLLTAVEE 1597          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HECW1_HUMAN (E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens GN=HECW1 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12
Identity = 48/145 (33.10%), Postives = 73/145 (50.34%), Query Frame = 3
Query:    3 KGFADILCNPRLQKQFFLSLELEDLDRMLFGSEQAICVEDWKAHTEYNG-YKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGLAS----RLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQE 422
            +GF +++ + RL   F    +  +L+ ++ G+ + I + DW+ +TEY G Y +    I WFW  V     EQR  LL F T    +P EGFA L      R    +       LP +HTCF RL  P YPS +++ ++L    +E
Sbjct: 1461 RGFYEVV-DSRLVSVF----DARELELVIAGTAE-IDLNDWRNNTEYRGGYHDGHLVIRWFWAAVERFNNEQRLRLLQFVTGTSSVPYEGFAALRGSNGLRRFCIEKWGKITSLPRAHTCFNRLDLPPYPSYSMLYEKLLTAVEE 1599          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: NED4L_PONAB (E3 ubiquitin-protein ligase NEDD4-like OS=Pongo abelii GN=NEDD4L PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 3
Query:  114 VEDWKAHTEY-NGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQEHVG 431
            V DW+ H+ Y NGY  N   I WFWK V  M AE+R  LL F T    +P+ GFA L      +L   +     ++LP +HTCF RL  P Y +   + ++L +  +   G
Sbjct:  844 VNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 954          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: NED4L_MOUSE (E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus GN=Nedd4l PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 3
Query:  114 VEDWKAHTEY-NGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQEHVG 431
            V DW+ H+ Y NGY  N   I WFWK V  M AE+R  LL F T    +P+ GFA L      +L   +     ++LP +HTCF RL  P Y +   + ++L +  +   G
Sbjct:  889 VNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 999          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: NED4L_HUMAN (E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens GN=NEDD4L PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 3
Query:  114 VEDWKAHTEY-NGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGL----ASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRIITQEHVG 431
            V DW+ H+ Y NGY  N   I WFWK V  M AE+R  LL F T    +P+ GFA L      +L   +     ++LP +HTCF RL  P Y +   + ++L +  +   G
Sbjct:  860 VNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 970          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11
Identity = 41/116 (35.34%), Postives = 57/116 (49.14%), Query Frame = 3
Query:   60 LELEDLDRMLFGSEQAICVEDWKAHTEYNGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGLASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLR 407
            L  + L++M+ G  + I VE  K    Y    E    + WFW  + E   E+R + + F +    LP    A ++ R  I K   P D LPTS TCF++L  P Y S  VM +RLR
Sbjct: 4718 LTAKQLEQMVCGMPE-ISVEVLKKVVRYREVDEQHQLVQWFWHTLEEFSNEERVLFMRFVSGRSRLPANT-ADISQRFQIMKVDRPYDSLPTSQTCFFQLRLPPYSSQLVMAERLR 4831          
BLAST of EY680100 vs. ExPASy Swiss-Prot
Match: HECD2_MOUSE (Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11
Identity = 46/149 (30.87%), Postives = 70/149 (46.98%), Query Frame = 3
Query:    9 FADILCNPRLQKQF---------------FLSLELEDLDRMLFGSEQAICVEDWKAHTEYNGYKENDAQIIWFWKIVGEMPAEQRKILLFFWTSVKHLPVEGFAGLASRLHIYKTVEPADRLPTSHTCFYRLCFPSYPSMAVMGDRLRI 410
            + D L N  + KQF                + L  E+++ ++ GS + + +   +  T+Y+GY + D  I +FW +V   P E +K LL F T    +PV G A L     I K     + LP +HTCF +LC P Y S   +  +L I
Sbjct:  618 YTDFLLNKSIYKQFAAFYCGFHSVCASNALMLLRPEEVEILVCGSPE-LDMHALQRSTQYDGYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADL--NFKISKNETSTNWLPVAHTCFNQLCLPPYKSRKDLKQKLII 763          
The following BLAST results are available for this feature:
BLAST of EY680100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
HACE1_MOUSE2.928e-1235.94E3 ubiquitin-protein ligase HACE1 OS=Mus musculus ... [more]
HACE1_HUMAN2.928e-1235.94E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens ... [more]
SMUF1_DROME6.523e-1229.41E3 ubiquitin-protein ligase Smurf1 OS=Drosophila m... [more]
HECW1_MOUSE8.519e-1233.10E3 ubiquitin-protein ligase HECW1 OS=Mus musculus ... [more]
HECW1_HUMAN8.519e-1233.10E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens ... [more]
NED4L_PONAB3.237e-1136.94E3 ubiquitin-protein ligase NEDD4-like OS=Pongo ab... [more]
NED4L_MOUSE3.237e-1136.94E3 ubiquitin-protein ligase NEDD4-like OS=Mus musc... [more]
NED4L_HUMAN3.237e-1136.94E3 ubiquitin-protein ligase NEDD4-like OS=Homo sap... [more]
HERC1_HUMAN4.228e-1135.34Probable E3 ubiquitin-protein ligase HERC1 OS=Homo... [more]
HECD2_MOUSE4.228e-1130.87Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-D10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680100 ID=EY680100; Name=EY680100; organism=Citrus sinensis; type=EST; length=881bp
CGAAAGGTTTTGCTGACATTCTTTGTAACCCAAGGCTCCAGAAGCAGTTT
TTCCTGAGTTTAGAGCTTGAAGATCTTGATCGAATGCTGTTTGGAAGTGA
GCAAGCCATATGTGTTGAAGATTGGAAGGCACATACTGAATACAATGGCT
ACAAAGAAAATGATGCTCAGATAATCTGGTTTTGGAAGATTGTTGGAGAA
ATGCCAGCAGAGCAGAGAAAGATCCTGCTTTTCTTTTGGACCTCAGTAAA
GCATCTTCCAGTCGAGGGCTTTGCTGGTTTGGCTTCTCGGCTTCACATTT
ACAAGACCGTGGAACCCGCTGATCGCCTTCCTACATCGCACACCTGCTTT
TACCGGTTGTGTTTTCCGTCTTATCCATCCATGGCCGTCATGGGGGATCG
GCTTCGCATCATCACACAAGAACATGTGGGCTGCAGCTTTGGAACTTGGT
GAGATACTTTGTCTGCCCTGGCGTCACAAGCGTTTCTGACTGCACATAAA
TTTGTATTCAGTTTGTACAGAGTTATAGAATACCGTCTTCCATTTTATGA
TCAAGACTATGTTAAGAAGGTCGTCTAGTTAATTGTCTTTGTGTCGTGAA
GTTTATGGTGTCATTGCCCTTTTTGTCACCTGTTTATAAAATATATTTAT
ATAGAGAGAGAGAAAAGTATAGCTTACCTTATAAATAAAGGTTGTATTAC
CAACCAGGGCAGGCAAGGCAAGGGCAGGGAAGGGAAGGAAGGAAAAAAAT
TTTCCTTCTTCCAAAACTTACTTAAAAATAAGTAAAACCTTTCCGTTTTT
GGGTCAGGTAAATACCCCCAAATGGAATGCAAGGACATTCAAAATCCAAC
AAAAAATTTTTCCGCTCCCAAAAAAAAAAAA
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