EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNP6 (50S ribosomal protein L24 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplX PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23 Identity = 58/108 (53.70%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 220 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 PV H +HVK GDTV+VIAG DKG +GE+ +VF S V+VK +NL+TKHV A IHSSNV LYS +VASRV + +DG +VR L KTGEIID Sbjct: 6 PVRHSVHVKKGDTVQVIAGKDKGTVGEVLQVFPKTSRVLVKGVNLRTKHVKPRQEGESGQIVVEEASIHSSNVQLYSTTQKVASRVAYTFTEDGRKVRKLKKTGEIID 113
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNE7 (50S ribosomal protein L24 OS=Synechococcus elongatus (strain PCC 7942) GN=rplX PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23 Identity = 58/108 (53.70%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 220 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 PV H +HVK GDTV+VIAG DKG +GE+ +VF S V+VK +NL+TKHV A IHSSNV LYS +VASRV + +DG +VR L KTGEIID Sbjct: 6 PVRHSVHVKKGDTVQVIAGKDKGTVGEVLQVFPKTSRVLVKGVNLRTKHVKPRQEGESGQIVVEEASIHSSNVQLYSTTQKVASRVAYTFTEDGRKVRKLKKTGEIID 113
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_NOSP7 (50S ribosomal protein L24 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplX PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23 Identity = 60/113 (53.10%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 205 KPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K + V HKMHVK GDTV+VIAG DKGKIGEI + S V+VK +N+KTKHV PIHSSNVMLYS + VASRV + +G +VR L KTGEI+D Sbjct: 4 KQGTPKVFHKMHVKTGDTVQVIAGKDKGKIGEIVQALPQLSKVIVKGVNIKTKHVKPQQEGESGRIVTQEFPIHSSNVMLYSTKQNVASRVCYTFTSEGKKVRKLKKTGEILD 116
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNY3 (50S ribosomal protein L24 OS=Synechocystis sp. (strain PCC 6803) GN=rplX PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.708e-23 Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 205 KPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K P KMHVK GDT++VI+G DKGK+GE+ + +S V+VK +N++TKHV APIHSS VMLYS + ++ASR+ + V DDG +VR L KTGEIID Sbjct: 3 KTKPAPHRVKMHVKKGDTIQVISGKDKGKVGEVLRTIPSHSQVVVKGVNIRTKHVKPRQEGESGQISSYEAPIHSSKVMLYSTKEKIASRICYTVTDDGRKVRMLKKTGEIID 115
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_ACAM1 (50S ribosomal protein L24 OS=Acaryochloris marina (strain MBIC 11017) GN=rplX PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.034e-21 Identity = 58/113 (51.33%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 205 KPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K S +KMHVK GDTV+VIAG DK K+GE+ V S V+V+ +N+KTKHV PIHSSNVMLYS + VASRV + D G +VR L KTGEIID Sbjct: 3 KKKSTAKRYKMHVKKGDTVQVIAGKDKAKVGEVIDVLPKLSQVVVEGVNMKTKHVKPRSESESGQISTVEFPIHSSNVMLYSNKENVASRVCYTFDDSGRKVRMLKKTGEIID 115
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNJA (50S ribosomal protein L24 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplX PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.657e-21 Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 229 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 +KM +K GDTV+VI+G DKGKIGE+ +VF + V+V+ +N+ T H APIH+ VMLYSK+ EVASR+G+++ DG +VR L KTGEI+D Sbjct: 28 YKMRIKKGDTVQVISGDDKGKIGEVLQVFPERNMVLVEGVNIVTYHRKPQREGESGRIETKEAPIHACKVMLYSKKQEVASRIGYQITADGRKVRVLKKTGEILD 132
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_GLOVI (50S ribosomal protein L24 OS=Gloeobacter violaceus GN=rplX PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.548e-20 Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 229 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 HK HVK GDTV+VI+G DKGK+G++++V V+V+ +N++TKHV API+S VMLYS + + ASRVGH V D G +VR L KTGEI+D Sbjct: 12 HKFHVKKGDTVQVISGKDKGKVGKVSEVLPTAGKVIVEGVNMQTKHV-KPQGDQQGQTLRREAPIYSCKVMLYSDKKKQASRVGHTVTDAGKKVRVLKKTGEILD 115
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RK24_RHDSA (50S ribosomal protein L24, chloroplastic OS=Rhodomonas salina GN=rpl24 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.904e-19 Identity = 48/97 (49.48%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIK 525 MHVK GDTVK++ G DKGKIGEITK+ + ++ V+V+DIN+K KHV APIHSSNVM+Y+ E +VASRV ++ + G ++R K Sbjct: 1 MHVKQGDTVKILTGKDKGKIGEITKIIKGSNQVVVQDINVKKKHVKPRKEGEIGKILQFEAPIHSSNVMVYNAESQVASRVNYQKDESGKKIRVFKK 97
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNJB (50S ribosomal protein L24 OS=Synechococcus sp. GN=rplX PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19 Identity = 49/105 (46.67%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 229 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 +KM +K GDTV+VI+G DKGKIGE+ +VF + V+V+ +N+ T H API VM YSK+ EVASR+G+++ DG +VR L KTGEI+D Sbjct: 28 YKMRIKQGDTVQVISGDDKGKIGEVLRVFPERNMVLVEGVNIVTYHRKPQREGESGRIETKEAPIPVCKVMAYSKKQEVASRIGYQITADGRKVRVLKKTGEILD 132
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_ANASP (50S ribosomal protein L24 OS=Anabaena sp. (strain PCC 7120) GN=rplX PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.248e-19 Identity = 58/148 (39.19%), Postives = 74/148 (50.00%), Query Frame = 1 Query: 205 KPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTK----------------------------------HVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 546 K ++ P HK+HVK GDTV++IAG DKGK+GE+ K S V+VK +N+KTK HV APIHSSNVMLYS + VASRV + +G +VR L KTGEI+D+ Sbjct: 2 KKDTTPKFHKLHVKTGDTVQIIAGKDKGKVGEVIKALPQLSKVVVKGVNIKTKQIIAGKDKGKVGEVIKALPQLSKVVVKGVNIKTKHVKPQQEGESGRIVTQEAPIHSSNVMLYSTKQNVASRVCYTFTAEGKKVRKLKKTGEILDN 149 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |