EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOTE (50S ribosomal protein L24 OS=Clostridium tetani GN=rplX PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18 Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 229 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 +K+HV+ DTV VI+G DKGKIGE+ +V + V+VKD+N+ TKH API+SS VMLY + + +R+ HK+LDDGT+VR K GE Sbjct: 3 NKVHVRKQDTVMVISGKDKGKIGEVLRVLPKSGKVVVKDVNVVTKHQKPSRENMQGGIIHVEAPIYSSKVMLYCTKCKSVTRINHKILDDGTKVRVCKKCGE 104
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNR3 (50S ribosomal protein L24 OS=Synechococcus sp. (strain RCC307) GN=rplX PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.040e-17 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 220 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 P KM ++ GDTV+VIAG DKGK GE+ + + V+V+ +NL+T+HV A +H+SNVM+YS + +VASRV V DG + R L KTGE++D Sbjct: 6 PTRTKMRIRKGDTVQVIAGKDKGKTGEVLRTLPWENRVVVQGVNLRTRHVKPAQEGESGRIVTEEASLHASNVMVYSTDKKVASRVEIVVDKDGNKKRKLKKTGELLD 113
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_PROM1 (50S ribosomal protein L24 OS=Prochlorococcus marinus (strain NATL1A) GN=rplX PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17 Identity = 47/104 (45.19%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM ++ GDTV+VI+G DKGK GE+ K + + V+V+ IN +TKHV P+H+SNVM+YS + +VAS+V V DG++ R L KTGE+ID Sbjct: 15 KMKIRKGDTVQVISGKDKGKTGEVLKTLPYENRVLVQGINQRTKHVKPSQEGETGRIETKEFPLHASNVMIYSTKEKVASKVEIFVDKDGSKKRRLKKTGELID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNSC (50S ribosomal protein L24 OS=Synechococcus sp. (strain CC9605) GN=rplX PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17 Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM ++ GDTV+VIAG DKGK G + + + + V+V+ +N++T+H A +H+SNVMLYS + +VASRV V DGT+ R L KTGE++D Sbjct: 15 KMRIRKGDTVQVIAGKDKGKTGAVLRTLPNENRVVVEGVNMRTRHEKPTQEGETGRIVTEEASLHASNVMLYSTDKKVASRVEIVVEKDGTKKRRLKKTGEVLD 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNS9 (50S ribosomal protein L24 OS=Synechococcus sp. (strain CC9902) GN=rplX PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17 Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM ++ GDTV+VIAG DKGK G + + + + V+V+ +N++T+H A +H+SNVMLYS + +VASRV V DGT+ R L KTGE++D Sbjct: 15 KMRIRKGDTVQVIAGKDKGKTGAVLRTLPNENRVIVEGVNMRTRHEKPSQEGESGRIVTEEASLHASNVMLYSTDKKVASRVEIVVEKDGTKKRKLKKTGEVLD 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNPW (50S ribosomal protein L24 OS=Synechococcus sp. (strain WH7803) GN=rplX PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 KM ++ GDTV+VIAG DKGK GE+ + + + V+V+ +N++T+HV A +H+SNVMLYS +VASRV DG++ R L KTGE+ID Sbjct: 15 KMRLRKGDTVQVIAGKDKGKTGEVLRTLPNENRVIVEGVNMRTRHVKPTQEGESGRIVTEEASLHASNVMLYSTAKKVASRVELITEKDGSKKRRLKKTGEVID 118
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOBM (50S ribosomal protein L24 OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=rplX PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17 Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 226 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 + K+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH API SS VMLY + + A+R+ +K+L+DGT+VR K GE Sbjct: 1 MSKIHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOBL (50S ribosomal protein L24 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rplX PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17 Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 226 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 + K+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH API SS VMLY + + A+R+ +K+L+DGT+VR K GE Sbjct: 1 MSKIHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOBK (50S ribosomal protein L24 OS=Clostridium botulinum (strain Okra / Type B1) GN=rplX PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17 Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 226 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 + K+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH API SS VMLY + + A+R+ +K+L+DGT+VR K GE Sbjct: 1 MSKIHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOB6 (50S ribosomal protein L24 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rplX PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17 Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 226 LHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 + K+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH API SS VMLY + + A+R+ +K+L+DGT+VR K GE Sbjct: 1 MSKIHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKEAPIFSSKVMLYCDKCKSATRISNKILEDGTKVRICKKCGE 103 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |