EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CLOPS (50S ribosomal protein L24 OS=Clostridium perfringens (strain SM101 / Type A) GN=rplX PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.009e-14 Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 534 K+HV+ DTV VI+G DKGK GE+ +V V+VK +NL KH A I+SS VML+ ++ + A+R+ HK+L++G +VR K GE Sbjct: 2 KVHVRKNDTVVVISGKDKGKTGEVLRVIPKTGKVVVKGVNLVKKHQKPNRQNMQGGIIEMEAAINSSKVMLFCEKCKKATRISHKLLENGAKVRVCKKCGE 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_LACS1 (50S ribosomal protein L24 OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=rplX PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13 Identity = 47/102 (46.08%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 M +K D VKVIAG DKGK G + KVF V+VK IN+ KH APIH SNVML A+RVG KV+ DG +VR K+GEI+ Sbjct: 1 MFIKKNDKVKVIAGKDKGKEGTVEKVFPAQDRVIVKGINIVKKHQKPTNANPNGGIVEVEAPIHVSNVMLIDPSNNEATRVGFKVV-DGKKVRVSKKSGEIL 101
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_THETN (50S ribosomal protein L24 OS=Thermoanaerobacter tengcongensis GN=rplX PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.039e-13 Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 229 HKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 +K+HVK GD V VI+G DKGK G + + F V+V+ +N+ TKH APIHSS VMLY + R G K+L++G +VRY + E + Sbjct: 4 NKLHVKKGDMVVVISGKDKGKKGRVLQAFPKEGKVIVEGVNVVTKHRKATRPQKPGGIIHQEAPIHSSKVMLYCENCGRGVRYGIKILENGEKVRYCKRCNETL 107
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_THELT (50S ribosomal protein L24 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rplX PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.039e-13 Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDSA 549 M VK D V+VI+G DKGK G++ KV + V+++ +N+ +H API++S VML + +RVG + LDDG +VR+ K GEI+D A Sbjct: 1 MRVKKDDLVEVISGKDKGKRGKVLKVLPRENKVVIQGVNIVKRHQRPIPQLREGGIIEREAPIYASKVMLVCPNCDKPTRVGMRFLDDGAKVRFCKKCGEIVDKA 105
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACP2 (50S ribosomal protein L24 OS=Bacillus pumilus (strain SAFR-032) GN=rplX PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13 Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 MHVK GD V VI+G DKGK G I F N V+V+ INL KH APIH SNVM + +RVG+KV +DG +VR K+G+++D Sbjct: 1 MHVKKGDKVVVISGKDKGKQGVILAAFPKNDRVLVEGINLVKKHSKPTQANPQGGISEQEAPIHVSNVMPLDPKTGEVTRVGYKV-EDGKKVRVAKKSGQVLD 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_ACIF5 (50S ribosomal protein L24 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rplX PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13 Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 + V+ D V V+AG DKGK G++ KV R +S V+V+ +N+ +HV APIH SNV +++ R+G+KVL+DG +VR GE+I Sbjct: 2 LKVRKDDEVVVLAGKDKGKRGKVLKVLREDSRVLVEKVNMIKRHVRPDRMGKAGGIVEKEAPIHVSNVAIFNAATGGGDRIGYKVLEDGQKVRVFKSNGEVI 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_ACIF2 (50S ribosomal protein L24 OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rplX PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13 Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 540 + V+ D V V+AG DKGK G++ KV R +S V+V+ +N+ +HV APIH SNV +++ R+G+KVL+DG +VR GE+I Sbjct: 2 LKVRKDDEVVVLAGKDKGKRGKVLKVLREDSRVLVEKVNMIKRHVRPDRMGKAGGIVEKEAPIHVSNVAIFNAATGGGDRIGYKVLEDGQKVRVFKSNGEVI 103
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_MOOTA (50S ribosomal protein L24 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplX PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.478e-13 Identity = 39/104 (37.50%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 232 KMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 ++HVK GDTV VI G D GK G++ V V+V+ +N+ +H AP+ SSNVML+ + +R+G ++L DGT+ R K GE+ID Sbjct: 5 RVHVKKGDTVMVITGKDAGKKGKVLSVEPARGRVVVEGVNIVKRHTRPTQKMPQGGIIEKEAPVASSNVMLFCNKCNRPTRIGRQILADGTKTRVCKKCGEVID 108
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACHD (50S ribosomal protein L24 OS=Bacillus halodurans GN=rplX PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.478e-13 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 MHVK GDTVKVI+G DKGK G I + + V+V+ +N+ KH APIH SNV+ + +RVG+KV ++G +VR K+GE++D Sbjct: 1 MHVKKGDTVKVISGKDKGKQGVILEAYPKKDRVLVEGVNIVKKHAKPSQENPQGGILNMEAPIHVSNVLPIDPKTGEPTRVGYKV-ENGKKVRIAKKSGEVLD 102
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_THEM4 (50S ribosomal protein L24 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplX PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13 Identity = 40/101 (39.60%), Postives = 54/101 (53.47%), Query Frame = 1 Query: 241 VKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 +K GDTVKV++G DKGK GE+ V V+V+ +N+ +H API+ V L A+RVG + LDDG +VRY K GE+ID Sbjct: 5 IKKGDTVKVLSGKDKGKTGEVVTVIPKEDKVVVRGVNIVKRHQRPNAQMRQGGIIEKEAPIYVCKVALVCPSCGQATRVGFRFLDDGRKVRYCKKCGEVID 105 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |