EY680065

Overview
NameEY680065
Unique NameEY680065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACCR (50S ribosomal protein L24 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplX PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACCQ (50S ribosomal protein L24 OS=Bacillus cereus (strain Q1) GN=rplX PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACC7 (50S ribosomal protein L24 OS=Bacillus cereus (strain AH187) GN=rplX PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACC4 (50S ribosomal protein L24 OS=Bacillus cereus (strain B4264) GN=rplX PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACC3 (50S ribosomal protein L24 OS=Bacillus cereus (strain 03BB102) GN=rplX PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACC2 (50S ribosomal protein L24 OS=Bacillus cereus (strain G9842) GN=rplX PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACC1 (50S ribosomal protein L24 OS=Bacillus cereus (strain ATCC 10987) GN=rplX PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACC0 (50S ribosomal protein L24 OS=Bacillus cereus (strain AH820) GN=rplX PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACAN (50S ribosomal protein L24 OS=Bacillus anthracis GN=rplX PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
[Close]
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_BACAH (50S ribosomal protein L24 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplX PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:  235 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543
            MHVK GD V+VI G DKGK G I   F   + V+V+ +N+  KH                APIH SNVM+   +    +RVG KV +DG +VR   K+GE++D
Sbjct:    1 MHVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMILDPKTGEPTRVGFKV-EDGKKVRIAKKSGELLD 102
The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
RL24_BACCR1.012e-1241.7550S ribosomal protein L24 OS=Bacillus cereus (stra... [more]
RL24_BACCQ1.012e-1241.7550S ribosomal protein L24 OS=Bacillus cereus (stra... [more]
RL24_BACC71.012e-1241.7550S ribosomal protein L24 OS=Bacillus cereus (stra... [more]
RL24_BACC41.012e-1241.7550S ribosomal protein L24 OS=Bacillus cereus (stra... [more]
RL24_BACC31.012e-1241.7550S ribosomal protein L24 OS=Bacillus cereus (stra... [more]
RL24_BACC21.012e-1241.7550S ribosomal protein L24 OS=Bacillus cereus (stra... [more]
RL24_BACC11.012e-1241.7550S ribosomal protein L24 OS=Bacillus cereus (stra... [more]
RL24_BACC01.012e-1241.7550S ribosomal protein L24 OS=Bacillus cereus (stra... [more]
RL24_BACAN1.012e-1241.7550S ribosomal protein L24 OS=Bacillus anthracis GN... [more]
RL24_BACAH1.012e-1241.7550S ribosomal protein L24 OS=Bacillus thuringiensi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-A09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bp
AAGAGTTGGAGAGAACAAGCAGCAGCAGCAAAAATGGCAGCAATGGCTGC
ACTTCAAAGCTCAATGACGTCACTTTCCATCTCCTCGAACTCCTTCTTTG
GCCAACGCCTCTCTTTCCCCTCTCTTTCTCCCGTAACTGTCAAGCCGACA
GACAAACCATGTCTCATTGTAGTGAGGCTTAAACGGTGGGAAAGAAAGGA
ATGCAAGCCAAATAGCCTTCCAGTTTTACACAAAATGCATGTTAAGGCGG
GAGATACAGTTAAAGTCATAGCCGGTTGTGACAAGGGTAAAATTGGAGAG
ATTACTAAGGTCTTTAGGCACAACAGCACGGTGATGGTCAAAGACATAAA
TCTCAAGACAAAGCATGTGAAGAAGAGAGAAGAGGAGGAACAAGGGCAGA
TCATTAAGATTGAAGCACCCATTCACAGCTCTAATGTGATGCTCTACTCA
AAAGAAATGGAAGTAGCAAGCCGGGTGGGTCATAAAGTCCTTGATGATGG
AACACGAGTCCGCTACCTTATAAAAACCGGAGAAATAATTGACAGTGCTG
AAAACTGGAAGAAACTGAAGGAAGCAAATCGCCAAGAGAAAACTGAAGTA
GCTACTGCTGCTTAAAAATCCCCACTCCTGACTTCACCTGTAACGTATTT
TCTGAAAGTCCTTTAATATCTTGGCCACCTGTCCAATTTAGTTTATTAAA
CCTTTGTTGAATCTCATTTCCCTGGGAATTAAAATAGTCATTCTGGGTTT
TTGGTGGGCCCAATGGCAAACTAAAAAATAGAATTTTTGAAAGCCCAACT
TTGAAGTTTGTTTTTAACTGTTATTTTTGGGAAATACTTAAAAAAAAAAT
TTTGCCCGGGGGGCCAAAAAAAAAAAAAAAAA
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