EY680062

Overview
NameEY680062
Unique NameEY680062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 42/88 (47.73%), Postives = 51/88 (57.95%), Query Frame = 2
Query:   14 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 271
            PVSV  +     F  YK+GVY    C     +VNH V+ VGYG  DG  YWL+KNSWG ++GD GY +M     N CGIA   SYP +
Sbjct:  247 PVSVGIDASHSSFFLYKTGVYYDPSC---TQNVNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 331          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 39/76 (51.32%), Postives = 48/76 (63.16%), Query Frame = 2
Query:   47 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 268
            FRFYK GVYS   CG      +HAV+AVGYG       YW++KNSWG +WG  GY  M   + NMC IA+ AS+P+
Sbjct:  324 FRFYKDGVYSEGNCGRP----DHAVLAVGYGTHPSYGDYWIVKNSWGTDWGKDGYVYMARNRGNMCHIASAASFPI 395          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 2
Query:   14 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 271
            P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    +   YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct:  244 PISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            PV  AF V   F  YKSGVY   + G+      HA+  +G+G+E+GVPYWL+ NSW  +WGD+G+FK+  G+N CGI
Sbjct:  248 PVEGAFTVFSDFLTYKSGVYKH-EAGDVMG--GHAIRILGWGIENGVPYWLVANSWNVDWGDNGFFKILRGENHCGI 321          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            PV  AF V   F  YKSGVY         M   HA+  +G+GVE+G PYWL+ NSW  +WGD+G+FK+  G++ CGI
Sbjct:  248 PVEGAFSVYSDFLLYKSGVYQHV---TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGI 321          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 40/77 (51.95%), Postives = 51/77 (66.23%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            PV  AF V   F  YKSGVY   + G+  M   HA+  +G+GVE+GVPYWL  NSW  +WGD+G+FK+  G+N CGI
Sbjct:  248 PVEGAFTVFSDFLTYKSGVYKH-EAGD--MMGGHAIRILGWGVENGVPYWLAANSWNLDWGDNGFFKILRGENHCGI 321          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            PV  AF V   F  YKSGVY         M   HA+  +G+GVE+G PYWL+ NSW  +WGD+G+FK+  G++ CGI
Sbjct:  248 PVEGAFSVYSDFLLYKSGVYQHV---TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGI 321          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            PV  AF V   F  YKSGVY         M   HA+  +G+GVE+G PYWL+ NSW  +WGD+G+FK+  G++ CGI
Sbjct:  248 PVEGAFSVYSDFLLYKSGVYQHV---TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGI 321          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 2
Query:   14 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 244
            P++VA + VD    Y+SG+  +T C +  +  NHAV+ VGYG+E+  PYW+ KNSWG NWG++GYF+     N CG+
Sbjct:  255 PIAVAIDCVDIID-YRSGI--ATVCNDNGL--NHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of EY680062 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14
Identity = 41/87 (47.13%), Postives = 52/87 (59.77%), Query Frame = 2
Query:   14 PVSVAFEVV-DGFRFYKSG-VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYP 265
            PV+V  +     F+ YK G +YS TKC +  M  NH V AVGYG      YW+I+NSWG +WGD GYF +     NMCGI   ++YP
Sbjct:  218 PVAVGMDASRPSFQLYKKGTIYSDTKCRSRMM--NHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARDSNNMCGIGRDSNYP 302          
The following BLAST results are available for this feature:
BLAST of EY680062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
CATS_BOVIN1.130e-1447.73Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL_BRUPA1.130e-1451.32Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATL1_MOUSE1.130e-1445.65Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATB_RAT1.130e-1449.35Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CATB_PONAB1.130e-1448.05Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_MOUSE1.130e-1451.95Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CATB_MACFA1.130e-1448.05Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_HUMAN1.130e-1448.05Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CATV_NPVST1.476e-1446.75Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
ACP1_ENTHI1.476e-1447.13Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-A05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680062 ID=EY680062; Name=EY680062; organism=Citrus sinensis; type=EST; length=907bp
CCCGCGTCCGCGACCTGTGAGTGTGGCATTTGAAGTAGTAGATGGATTCC
GATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATGTGGAAATACTCCC
ATGGATGTGAACCATGCTGTCGTTGCTGTTGGGTACGGAGTTGAAGATGG
TGTTCCATATTGGCTGATTAAGAACTCTTGGGGAGAGAACTGGGGCGATC
ATGGCTACTTTAAGATGGAGATGGGGAAGAACATGTGTGGTATTGCAACT
TGTGCATCATACCCAGTTGTGGCTTAGTCTGCTCCTGAAGAAATAGTTGG
ATCTGGCTATCAGCAAGTCATTTGCTCATAAAACTTATATTATTTCACTC
AAGCATGATAGCAGAATGGTTGGCTTTATGTACAAAATAAATTCGGAGAT
TAATGTCCATATAATCTACAATAGCAATGCATGGCTGCTTGATGTTCAAA
ATAAATTCTGAGATCTATGTCCATGTAAACAGTCATTGTGACTAGGACAC
CACCGATGTTATATATATTTTGTCAATGCAAGGTAGTTGTTATCCACCAA
CACGCAGCCCCCCGATCCCGACAAAGCTCGAACACAAAACAGAACACAAA
ACCCTGACAAGAACAAAAGAGGGGGGGGCCGCTCCAAGGGAATCAACCTA
ACGTACCCGTGCCGGGCGGACGTCCAACCCCTTCTTATAGGGGGTCCCCA
AATTTACATTTCCCGGGGCGGCTTTTTTTTAAACTCTGTCGAAGGGGAAA
AACCCCGGCGTTTTACCCAATATTTTCCCCCTTGTGCACCAACTCCCCCT
TTTTTCCGCCGCTGTGGTAAAAAGCCAAAAAGCCCCCCCCCCCATACCCC
CCCTTCCCCCCCGGTTCGCCCCGGCCACCGAACTGGTGTAGGTGGGGACC
CCCCCCC
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