EY680048

Overview
NameEY680048
Unique NameEY680048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_SHIFL (NADH-quinone oxidoreductase subunit G OS=Shigella flexneri GN=nuoG PE=3 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 8.683e-12
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = -2 
Query:   12 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTA 242
            R  +V I++I    N +GL ++GG SL+ AL  +  G ADA+VVLENDL+    + +++AAL  A +V+V DHQ+TA
Sbjct:  523 RGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVVLENDLHRYASATRVNAALAKAPLVMVVDHQRTA 599
The following BLAST results are available for this feature:
BLAST of EY680048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
NUOG_SHIFL8.683e-1245.45NADH-quinone oxidoreductase subunit G OS=Shigella ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-H03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680048 ID=EY680048; Name=EY680048; organism=Citrus sinensis; type=EST; length=651bp
CGGTCGCTGGTGGCGGTTTTCTGGTGGTCGGCAACGATCACCACTTTGGC
CGCGTTCAGCGCTGCGTCAATCTTGGCCGAATCAGTACGGGTGTACAGGT
CGTTTTCCAGTACCACGATCGCATCGGCGCTGCCGTCGGTCACGGCTTGC
AGGGCGGCGTCGAGGGACTCGCCACCGACCATGGCCAGGCCAAGGATGTT
AGCCTCTGGCACAATCAGGCTGATGGAAACGTTCTTCTCGCGCCGGTTCT
CGGCTTTGGCAATGATGGCAACAGCTTCTATAATCGCCTTGAATTCCCTC
AAGGTACCGGAAATGCTCTATGGGCTCGTGGCAGACCAGCAGGGCATCAC
CGACATACCTGGGCAAGGGAAATTGCTGGGGAGGGCAGGCGGCCAAAATG
GGATAGCACTGGTGGCGTCCAAGAGCGGTGGCTCNCCAGCAGCACGCGAG
TCGACAAACGAAGTTCCAGGTGATGGATCATAAAAATCTCGGAACGACAA
GAGACAAGACTTGGGGAGCAAGGCCCGTGCCCGCTGACGACTGAAAGAGC
GTCAACCGTGCGGGAGCGGAGGGATGGATGAAGCAAGCGGGGATGTAAGG
GAGGGAATTGGCGGTGACAAGGAAAAGAAAGGAGCACGAACCTGTCGGCC
C
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