EY680032

Overview
NameEY680032
Unique NameEY680032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680032 vs. ExPASy Swiss-Prot
Match: HOX32_ORYSI (Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. indica GN=HOX32 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.118e-53
Identity = 107/153 (69.93%), Postives = 121/153 (79.08%), Query Frame = 1
Query:    1 QRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFL---GGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 450
            QRLSRGFNDAVNGF DDGWSLM+ DGAEDV IA NS+ +    S+  +S  F    GGILCAKASMLLQNVPPALLVRFLREHRSEWAD  VDAYSAA+L+A  YA PG+R   F GSQ+I+PL HT+EHEE LEVIRLEGHSL  ++  +SR
Sbjct:  414 QRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAFNSSPNKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAAALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSR 566          

HSP 2 Score: 81.6481 bits (200), Expect = 6.624e-15
Identity = 42/80 (52.50%), Postives = 53/80 (66.25%), Query Frame = 2
Query:  362 LATQLSMKSCLKLFDWRGILLHKKTLSYQGDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRLNPIGFK 601
            LA  L  +  L++    G  L    +    D++LLQ+CSGVDENA GAC++LVFAPIDE F DD PLLPSGFR+ P+  K
Sbjct:  537 LAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLLQLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGK 616          
BLAST of EY680032 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSJ (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. japonica GN=HOX29 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.948e-47
Identity = 75/151 (49.67%), Postives = 106/151 (70.20%), Query Frame = 1
Query:    1 QRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLG-GILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 450
            Q+L+RGFN+A+NG  DDGWS++  DG +DV I+VNS+K +   +  ++ L  +  G+LCAKASMLLQ+V P  L++FLREHRS+WAD N+DA+ A+++K      P  R   F+G Q+I+PL HT E EE LEVI+L G++   +D  V R
Sbjct:  412 QKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNSSKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSG-QVILPLAHTFEPEEFLEVIKL-GNASNYQDTLVHR 560          

HSP 2 Score: 68.1662 bits (165), Expect = 4.948e-47
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 2
Query:  452 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRLNPI 592
            D+ LLQ+ +GV+E++ G CSEL+FAPID  F DD PLLPSGFR+ PI
Sbjct:  561 DLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSGFRIIPI 607          
BLAST of EY680032 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSI (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica GN=HOX29 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.948e-47
Identity = 75/151 (49.67%), Postives = 106/151 (70.20%), Query Frame = 1
Query:    1 QRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSLAFLG-GILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 450
            Q+L+RGFN+A+NG  DDGWS++  DG +DV I+VNS+K +   +  ++ L  +  G+LCAKASMLLQ+V P  L++FLREHRS+WAD N+DA+ A+++K      P  R   F+G Q+I+PL HT E EE LEVI+L G++   +D  V R
Sbjct:  405 QKLTRGFNEALNGLADDGWSVIESDGVDDVCISVNSSKVIGCNATFSSGLPIVSTGVLCAKASMLLQDVSPPSLLQFLREHRSQWADSNLDAFFASAMKPNFCNLPMSRLGGFSG-QVILPLAHTFEPEEFLEVIKL-GNASNYQDTLVHR 553          

HSP 2 Score: 68.1662 bits (165), Expect = 4.948e-47
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 2
Query:  452 DIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRLNPI 592
            D+ LLQ+ +GV+E++ G CSEL+FAPID  F DD PLLPSGFR+ PI
Sbjct:  554 DLFLLQMYNGVEESSAGTCSELIFAPIDASFSDDSPLLPSGFRIIPI 600          
BLAST of EY680032 vs. ExPASy Swiss-Prot
Match: ATB14_ARATH (Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana GN=ATHB-14 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.625e-45
Identity = 93/152 (61.18%), Postives = 112/152 (73.68%), Query Frame = 1
Query:    1 QRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 450
            QRL RGFNDAVNGF DDGWS M  DGAEDV + +N +      S   NS   +F  G+LCAKASMLLQNVPPA+LVRFLREHRSEWAD+ VDAY+AASL+A  +A P  R   F  +Q+I+PL  T+EHEE LEV+RLEGH+ + ED  ++R
Sbjct:  407 QRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMINLSPGKFGGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHRSEWADYGVDAYAAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLAR 558          

HSP 2 Score: 82.8037 bits (203), Expect = 2.973e-15
Identity = 42/90 (46.67%), Postives = 56/90 (62.22%), Query Frame = 2
Query:  362 LATQLSMKSCLKLFDWRGILLHKKTLSYQGDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRLNPIGFKNT*YPGYVNR 631
            LA  +  +  L++    G     + +    D++LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFR+ P+  K+T      NR
Sbjct:  529 LAQTVEHEESLEVVRLEGHAYSPEDMGLARDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQKSTPNGASANR 618          
BLAST of EY680032 vs. ExPASy Swiss-Prot
Match: ATBH9_ARATH (Homeobox-leucine zipper protein ATHB-9 OS=Arabidopsis thaliana GN=ATHB-9 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.123e-45
Identity = 91/152 (59.87%), Postives = 113/152 (74.34%), Query Frame = 1
Query:    1 QRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSR 450
            QRL RGFNDAVNGF DDGWS M+ DG ED+ I +NS+ +    S   +S   +F  G+LCAKASMLLQNVPP +L+RFLREHR+EWAD+ VDAYSAASL+A  YA P +R   F  +Q+I+PL  T+EHEE LEV+RL GH+ + ED  +SR
Sbjct:  403 QRLCRGFNDAVNGFVDDGWSPMSSDGGEDITIMINSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAYSAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSR 554          

HSP 2 Score: 80.4925 bits (197), Expect = 1.476e-14
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 2
Query:  362 LATQLSMKSCLKLFDWRGILLHKKTLSYQGDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRLNPIGFK 601
            LA  L  +  L++    G     + +    D++LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFR+ P+  K
Sbjct:  525 LAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQK 604          
The following BLAST results are available for this feature:
BLAST of EY680032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
HOX32_ORYSI2.118e-5369.93Homeobox-leucine zipper protein HOX32 OS=Oryza sat... [more]
HOX29_ORYSJ4.948e-4749.67Homeobox-leucine zipper protein HOX29 OS=Oryza sat... [more]
HOX29_ORYSI4.948e-4749.67Homeobox-leucine zipper protein HOX29 OS=Oryza sat... [more]
ATB14_ARATH1.625e-4561.18Homeobox-leucine zipper protein ATHB-14 OS=Arabido... [more]
ATBH9_ARATH2.123e-4559.87Homeobox-leucine zipper protein ATHB-9 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-F11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680032 ID=EY680032; Name=EY680032; organism=Citrus sinensis; type=EST; length=909bp
CAAAGACTAAGCAGAGGCTTCAATGATGCTGTCAATGGGTTTAATGATGA
TGGTTGGTCGTTGATGACCTGTGATGGTGCTGAAGATGTGATAATTGCAG
TTAATTCAACTAAGAGTTTGAGCACTGCCTCTAATCCTACTAATTCCCTT
GCATTCCTTGGAGGTATTCTCTGCGCAAAGGCCTCGATGCTTCTCCAAAA
TGTTCCTCCTGCATTGCTTGTCCGCTTCCTGCGGGAGCATCGGTCTGAGT
GGGCTGATTTCAATGTTGATGCCTATTCTGCCGCATCGTTGAAAGCCGGT
TCCTATGCTTATCCTGGAATGAGGCCTACGAGGTTTACTGGGAGCCAAAT
AATTATGCCACTTGGCCACACAATTGAGCATGAAGAGTTGCTTGAAGTTA
TTCGACTGGAGGGGCATTCTCTTGCACAAGAAGACGCTTTCGTATCAAGG
GGACATTCATCTACTTCAGATATGCAGTGGGGTTGATGAAAATGCCGTGG
GAGCATGTTCTGAACTTGTCTTTGCTCCTATTGATGAAATGTTTCCAGAT
GATGGTCCATTGTTGCCCTCCGGTTTCCGCCTTAATCCCATTGGATTCAA
AAACACCTGATACCCGGGATACGTTAACCGCCCATAAAACCCCTAAATTT
GACCATCCAATTCCTTGAAATTGGCCCGGCAACCAACCCCGGCGCCGGGA
AATTCTTCCTCCGTGGCCTCCACCCCCGGATCAATATTGTCTGATTGGCT
TTTCCGTTTCCTTTTTGGAGAGCAATCTAACAAGAAATAAGGGGGACCCC
CTTGGGACGGTGCGTTTAGGTTCAGTAAGGGGGTTTTTTTACCTCGGGTT
ACAAAAGGGGGGGCCCAGGGGCCCACAACTTGACCCCCACGAGGATTCGG
GCCCCCCAA
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