EY680012

Overview
NameEY680012
Unique NameEY680012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: GLGA_GEOUR (Glycogen synthase OS=Geobacter uraniireducens (strain Rf4) GN=glgA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.244e-24
Identity = 68/181 (37.57%), Postives = 103/181 (56.91%), Query Frame = 2
Query:    5 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 526
            + RL  QKG D+LA  +P F++  +Q+++LGTG +   K L+ +      KARG    ++       LA  I AG+D  L+PS +EPCGL Q+ A+RYG VP+V  TGGL DTV +     Q G+   +  + +     A+  TV R+L  +  + A  ++MK GM+ D SW   A+++EE
Sbjct:  303 VSRLTAQKGFDLLAELMPKFVRSRLQLVILGTGDEKYLKLLQDI------KARGAGNISVNIGFHPELAPKIYAGSDIFLMPSHYEPCGLGQMIALRYGAVPLVRKTGGLADTVFDE----QDGATEPNGFSFEDYTPEALWETVSRSLQAFDDKGAWKKLMKRGMSCDYSWDASARRYEE 473          
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: GLGA_MANSM (Glycogen synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=glgA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.625e-24
Identity = 64/175 (36.57%), Postives = 100/175 (57.14%), Query Frame = 2
Query:    5 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKWEE 526
            I RL EQKG D+L  +  + IK+  Q+ +LG+G   +E  L  L   +P+       ++ PL+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +  T   +          +  +  A+S  + RA + +  Q     ++   M QD SW+  A+++EE
Sbjct:  299 ITRLTEQKGVDLLIQSAENIIKQGGQLALLGSGAPSLESALLGLAHKHPKNIAVKIGYDEPLSHLMVAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRQTGGLADTVVDS-TAENIKERRATGFVFNEANSQALSHAISRAFSLWKKQRTWFTVRTVAMEQDFSWQISARRYEE 472          
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: GLGA_BACCZ (Glycogen synthase OS=Bacillus cereus (strain ZK / E33L) GN=glgA PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.625e-24
Identity = 69/177 (38.98%), Postives = 100/177 (56.50%), Query Frame = 2
Query:    5 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 526
            + RL +QKG D++       ++E+VQ I+LG+G    E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+  +  TG   G    +  A D +       TV RA+  Y  + + E ++K  M +D SW+  A  +++
Sbjct:  299 VTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVLRAIEFYHDKPVWEQLVKQAMTEDYSWEKSALAYKK 469          
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: GLGA_BACCN (Glycogen synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=glgA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.625e-24
Identity = 69/181 (38.12%), Postives = 99/181 (54.70%), Query Frame = 2
Query:    5 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 526
            + RL +QKG D++ A     ++E+VQ I+LG+G    E+  E +   Y EK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YG +PIV  TGGL DTV+      +   GF   +F+             +  TVRRAL  Y   A+  +++K  M +D SWK  A  +++
Sbjct:  299 VTRLTKQKGLDLVRAVFQEIMQEDVQCIILGSGDSEYEQFFEWMAYEYSEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALTYGVIPIVRETGGLNDTVKSYHVETKSGNGFTFTNFNAH----------DMLYTVRRALRYYEDPAVWNQLVKQAMTEDHSWKTSALAYKD 469          
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: GLGA_THEAB (Glycogen synthase OS=Thermosipho africanus (strain TCF52B) GN=glgA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.123e-24
Identity = 66/178 (37.08%), Postives = 100/178 (56.18%), Query Frame = 2
Query:    5 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 520
            I RL +QKG DIL+  + + +  +VQ ++LGTG K  E+  + +E  +P+K      F+I LA  I A +D  L+PSR+EPCGL Q++++RYGT+P+V  TGGL DTV    EE   G   G            D A +   V RA+  +  +     ++++N M  DLSW+  A ++
Sbjct:  304 ITRLVDQKGLDILSEVLRYILNMDVQFVLLGTGDKKYEEMFKDIEKEFPDKMSANITFDIVLAQKIYASSDMFLMPSRYEPCGLGQMYSLRYGTIPVVRYTGGLADTVMEYDEEAMKGNGFG--------FKEYDSAYLLKAVARAVDFFKNKKGHWKKLIENAMKTDLSWERSANEY 473          
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: GLGA_MARAV (Glycogen synthase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=glgA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.123e-24
Identity = 72/194 (37.11%), Postives = 102/194 (52.58%), Query Frame = 2
Query:    2 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT-YGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGNE 559
            F+GRL EQKG D L   I   ++   Q  +LG+G+   ++ L+ +   +P +      +N  LAH I AGAD  L+PSRFEPCGL Q++++RYGTVP+V   GGL DTV        E   GF     + D          A+   + RALA     +   ++ +NGM  D SWK  A ++     NL +AGN+
Sbjct:  301 FVGRLVEQKGLDWLLGVIKPLLERGCQFALLGSGEHHYQESLKAMVREWPGQCSLTLGYNEGLAHRITAGADIFLMPSRFEPCGLNQMYSLRYGTVPVVHGVGGLNDTVFDPNEETPEQANGFVFREATPD----------ALHAAITRALAAREDRKTWRKLQENGMKGDYSWKNRAGEYAALYRNL-IAGND 483          
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: GLGA_BACHK (Glycogen synthase OS=Bacillus thuringiensis subsp. konkukian GN=glgA PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.123e-24
Identity = 69/182 (37.91%), Postives = 102/182 (56.04%), Query Frame = 2
Query:    5 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNL 541
            + RL +QKG D++       ++E+VQ I+LG+G    E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+  +  TG   G    +  A D +       TV RA+  Y  + +  +++K  M +D SW+  A  +++   +L
Sbjct:  299 VTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVLRAIEFYHDKPVWDQLVKQAMTEDYSWEKSALAYKKLYKSL 474          
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: SSY3_SOLTU (Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.772e-24
Identity = 70/184 (38.04%), Postives = 97/184 (52.72%), Query Frame = 2
Query:    5 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQ-----LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT---VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 526
            I RL  QKG  ++  AI   ++ N Q+++LG+   P  +        QL   Y ++AR    ++ PL+H+I AGADFIL+PS FEPCGL QL AMRYG++P+V  TGGL DT   V+      Q      +  + D  D   V   + RAL+ +  G      + K  M QD SW  PA  + E
Sbjct: 1038 ITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRVQNNFVNLANQLHSKYNDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAGGVDYALNRALSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLE 1221          
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS3 (Glycogen synthase OS=Synechococcus sp. (strain CC9311) GN=glgA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.772e-24
Identity = 75/201 (37.31%), Postives = 106/201 (52.74%), Query Frame = 2
Query:    5 IGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-NEPGIDGEEI 583
            + RL +QKG D+L       +   + QI+VLGTG + +E  L Q+   +P +      ++  L+ +I AG+D  L+PSRFEPCG+ QL AMRYG VP+V   GGLVDTV      ++  TGF    F       DPVD    +  VR   A     +  E+ + GM QD SW   A ++++  +  EV G  EPG D   +
Sbjct:  278 VSRLVDQKGVDLLLQVADRLLAYTDTQIVVLGTGDRGLESGLWQMASRHPGRVSVFLTYDDDLSRLIYAGSDAFLMPSRFEPCGISQLLAMRYGCVPVVRKVGGLVDTVPPHDPAQQSGTGFCFDRF-------DPVDF--FTALVRSWEAFRHQDSWRELQRRGMRQDYSWARSAMEYDQ--MYREVCGLKEPGPDAAAV 467          
BLAST of EY680012 vs. ExPASy Swiss-Prot
Match: GLGA_RHIEC (Glycogen synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgA PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.772e-24
Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 2
Query:    5 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 520
            I RL  QKG DI+A      +    +++VLG+G+  +E  L       P +      +N P++H++ AG D I+IPSRFEPCGL QL+A+RYG VPIVA TGGL DTV +          +   +   PV    +   +RRA+  Y  + L  ++ K GM  D+SW+  A+++
Sbjct:  297 ISRLTWQKGMDIVANVADRIVAMGGKLVVLGSGEAALEGALLASASRNPGRIGVSIGYNEPMSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGMLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468          
The following BLAST results are available for this feature:
BLAST of EY680012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 361
Match NameE-valueIdentityDescription
GLGA_GEOUR1.244e-2437.57Glycogen synthase OS=Geobacter uraniireducens (str... [more]
GLGA_MANSM1.625e-2436.57Glycogen synthase OS=Mannheimia succiniciproducens... [more]
GLGA_BACCZ1.625e-2438.98Glycogen synthase OS=Bacillus cereus (strain ZK / ... [more]
GLGA_BACCN1.625e-2438.12Glycogen synthase OS=Bacillus cereus subsp. cytoto... [more]
GLGA_THEAB2.123e-2437.08Glycogen synthase OS=Thermosipho africanus (strain... [more]
GLGA_MARAV2.123e-2437.11Glycogen synthase OS=Marinobacter aquaeolei (strai... [more]
GLGA_BACHK2.123e-2437.91Glycogen synthase OS=Bacillus thuringiensis subsp.... [more]
SSY3_SOLTU2.772e-2438.04Soluble starch synthase 3, chloroplastic/amyloplas... [more]
GLGA_SYNS32.772e-2437.31Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_RHIEC2.772e-2437.57Glycogen synthase OS=Rhizobium etli (strain CFN 42... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-E03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680012 ID=EY680012; Name=EY680012; organism=Citrus sinensis; type=EST; length=931bp
CTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGATATTCTTGCAGCTG
CCATTCCCCATTTCATCAAAGAGAATGTTCAGATAATAGTCCTTGGTACT
GGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGATACTGTACCC
TGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCCTCTGGCGCATATGA
TAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGT
GGTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGC
TTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCC
AGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTG
GCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCA
AGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGA
AAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCT
GGTAATGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGA
AAAATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTTATT
TTTGGACCGCAAACATGTTCCTGTAATTTCTCCCCACCCAAGATATTACT
TAAGGAAAAAACATAGGGTGGGCAGTATATGGCACAAGGCCCTTTTTTTC
AAAAATGGTTTGGGATTTGAAAACATTATTGTTTACCTTGGTATAAGGAA
AAAATTAAATTTCTGGTTTTTCAATTTTTTGGTAAAAGGGGCTCCTGAAG
GGGTTGTCCCCCCCCTTCCCCCGAAAAGGAAAAAATTTTCCCTTTGAAAC
AATTTTTTTAAGATTTTTAAAAAAAAAAAAA
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