EY744808

Overview
NameEY744808
Unique NameEY744808
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: COFI_USTMA (Cofilin OS=Ustilago maydis GN=COF1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.333e-19
Identity = 48/128 (37.50%), Postives = 78/128 (60.94%), Query Frame = 2
Query:  197 TSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLE 580
            +SG+ V+    + F EL+  K  +Y+I+ ++          T   + SY+DF A LP  +CRYA+YDF+Y   +  +++KI F +WSP  ++I+ KM++A+SKD  R+ L GI  EIQ TD +E+  +
Sbjct:    2 SSGVKVSQECLDKFQELKLGKKIKYIIYSLNDKNTEIVVQNTS-TSTSYDDFLAELPPTECRYAIYDFEYEKGDAGKRNKICFFSWSPDDAKIKPKMVFASSKDALRKALVGISTEIQGTDFSEVSYD 128          
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: COFI_SCHPO (Cofilin OS=Schizosaccharomyces pombe GN=cof1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.975e-18
Identity = 51/127 (40.16%), Postives = 75/127 (59.06%), Query Frame = 2
Query:  200 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLE 580
            SG+ V+     AF EL+  K  RYV+FK++               + ++ F   LPE DCRYA+YDF++   E   ++KI FI+WSP  + I++KM+Y++SKD  RR   GI  +IQATD +E+  E
Sbjct:    4 SGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEKKSTDKD-FDTFLGDLPEKDCRYAIYDFEFNLGEGV-RNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYE 128          
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: COF1_DICDI (Cofilin-1 OS=Dictyostelium discoideum GN=cofA PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.184e-17
Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = 2
Query:  197 TSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEM 571
            +SG+ +A +  + F +L+  + +  +I++I           T     S+++F   LPEN+CRY V D+ Y   E  QKSKI F+AW P T+ I+ KM+  +SKD  R+   GI  EIQ TD +E+
Sbjct:    2 SSGIALAPNCVSTFNDLKLGRKYGGIIYRISDDSKEIIVDSTLPAGCSFDEFTKCLPENECRYVVLDYQY-KEEGAQKSKICFVAWCPDTANIKKKMMATSSKDSLRKACVGIQVEIQGTDASEV 125          
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: COFI_CRYNE (Cofilin OS=Cryptococcus neoformans GN=COF1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.864e-17
Identity = 50/138 (36.23%), Postives = 76/138 (55.07%), Query Frame = 2
Query:  197 TSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDY-VTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRTRAN*K 607
            +SG+         F EL+  K   YVI+ +                + ++ F A LPE DCR+AVYDF++ +      ++K+ FI WSP  + ++ KM++A+SK+  RR LDGIH EIQATD +E+  + L  +A  K
Sbjct:    2 SSGVQPTQECLEKFQELKTGKKLTYVIYGLSEDKRSIVVLKASEDKD-FDSFVAELPEKDCRWAVYDFEFTLPGGEGVRNKLCFIVWSPDDASVKNKMIFASSKEAIRRRLDGIHTEIQATDFSEITKDALFEKATRK 138          
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: CADF_DROME (Cofilin/actin-depolymerizing factor homolog OS=Drosophila melanogaster GN=tsr PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.084e-16
Identity = 48/140 (34.29%), Postives = 79/140 (56.43%), Query Frame = 2
Query:  200 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPE---NDCRYAVYDFDYV-----TSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRTR 595
            SG+ V+D  K  + E+++ K HRYVIF I               AE Y+ F   + +    +CRY ++DF+Y+     TSE+ +K K+F ++W P T++++ KMLY++S D  ++ L G+   IQATD +E   E +  +
Sbjct:    3 SGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAE-YDQFLEDIQKCGPGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASREAVEEK 141          
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: COF4_DICDI (Cofilin-4 OS=Dictyostelium discoideum GN=cofE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.498e-13
Identity = 33/79 (41.77%), Postives = 55/79 (69.62%), Query Frame = 2
Query:  335 ESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEM 571
            ES+ED+    P++DCRY VYDF Y+ ++  +K+KIFFI+W P  ++I+ K+++  ++    ++L GI   I+ATD TE+
Sbjct:   47 ESFEDYINKFPQDDCRYGVYDFSYMDNKENKKNKIFFISWCPVETKIKNKIVHTATEQSIYKKLVGIDAIIKATDNTEI 125          
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: CADF2_PLAFX (Cofilin/actin-depolymerizing factor homolog 2 OS=Plasmodium falciparum (isolate HB3) PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.498e-13
Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 2
Query:  200 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXT-GGPAESYEDFAAALPEN----DCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRT 592
            SG+ V+D     F +L+ K +H+Y+I++I+                +SY+D    +  N    +CRY + D    T E   +++I+FI WSP  ++ + KMLYA+SK+   R+++GI   ++ T   E   +ELRT
Sbjct:    3 SGVKVSDECVYEFNKLKIKHIHKYIIYRIENYEEVIVDFLEQDNSLKSYKDIIIDIRNNLKTTECRYIIADMPIPTPEGVLRNRIYFIFWSPDLAKSKEKMLYASSKEYLVRKINGIFKSLEITCDLEDFEDELRT 138          
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: CADF2_PLAF7 (Cofilin/actin-depolymerizing factor homolog 2 OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0326 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.498e-13
Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 2
Query:  200 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXT-GGPAESYEDFAAALPEN----DCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRT 592
            SG+ V+D     F +L+ K +H+Y+I++I+                +SY+D    +  N    +CRY + D    T E   +++I+FI WSP  ++ + KMLYA+SK+   R+++GI   ++ T   E   +ELRT
Sbjct:    3 SGVKVSDECVYEFNKLKIKHIHKYIIYRIENYEEVIVDFLEQDNSLKSYKDIIIDIRNNLKTTECRYIIADMPIPTPEGVLRNRIYFIFWSPDLAKSKEKMLYASSKEYLVRKINGIFKSLEITCDLEDFEDELRT 138          
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: DEST_PIG (Destrin OS=Sus scrofa GN=DSTN PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.240e-12
Identity = 30/80 (37.50%), Postives = 53/80 (66.25%), Query Frame = 2
Query:  335 ESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMD 574
            + ++ F   LPE DCRYA+YD  + T E+ +K ++ F  W+P  + +++KM+YA+SKD  +++  GI +E QA  P +++
Sbjct:   66 DPFKHFVGMLPEKDCRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLN 144          
BLAST of EY744808 vs. ExPASy Swiss-Prot
Match: DEST_HUMAN (Destrin OS=Homo sapiens GN=DSTN PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.240e-12
Identity = 30/80 (37.50%), Postives = 53/80 (66.25%), Query Frame = 2
Query:  335 ESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMD 574
            + ++ F   LPE DCRYA+YD  + T E+ +K ++ F  W+P  + +++KM+YA+SKD  +++  GI +E QA  P +++
Sbjct:   66 DPFKHFVGMLPEKDCRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLN 144          
The following BLAST results are available for this feature:
BLAST of EY744808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
COFI_USTMA2.333e-1937.50Cofilin OS=Ustilago maydis GN=COF1 PE=3 SV=1[more]
COFI_SCHPO1.975e-1840.16Cofilin OS=Schizosaccharomyces pombe GN=cof1 PE=1 ... [more]
COF1_DICDI2.184e-1736.80Cofilin-1 OS=Dictyostelium discoideum GN=cofA PE=1... [more]
COFI_CRYNE4.864e-1736.23Cofilin OS=Cryptococcus neoformans GN=COF1 PE=3 SV... [more]
CADF_DROME1.084e-1634.29Cofilin/actin-depolymerizing factor homolog OS=Dro... [more]
COF4_DICDI2.498e-1341.77Cofilin-4 OS=Dictyostelium discoideum GN=cofE PE=3... [more]
CADF2_PLAFX2.498e-1331.62Cofilin/actin-depolymerizing factor homolog 2 OS=P... [more]
CADF2_PLAF72.498e-1331.62Cofilin/actin-depolymerizing factor homolog 2 OS=P... [more]
DEST_PIG1.240e-1237.50Destrin OS=Sus scrofa GN=DSTN PE=1 SV=3[more]
DEST_HUMAN1.240e-1237.50Destrin OS=Homo sapiens GN=DSTN PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-G06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744808 ID=EY744808; Name=EY744808; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTTTTCTTTAAAAATCTTCTTTCTTTTTTTTAATTATTA
CGTATAAAACTAGGCCACTTCTTTTAGTTTTATTCTGAGCACAATACATT
TTCGCTCTCTTTCATTGTTTATTTACTTGCTCTGGTGATCTGCGTTCTGT
TGCTGCCGCCGCCATGTCTTTCAGAGGACTAAGTCGACCAAATGCCACTT
CTGGCATGGGCGTTGCTGATCACAGCAAAAATGCATTCACGGAATTGCAA
AGGAAGAAGGTTCACCGTTATGTGATTTTTAAGATTGATGAGAAGAAAAA
GGAGGTTGTGGTTGAGAAGACTGGTGGCCCCGCTGAGAGCTACGAGGATT
TCGCTGCTGCTTTGCCTGAGAATGATTGTCGATATGCTGTATATGACTTT
GACTATGTGACTTCTGAGAATTGTCAGAAGAGCAAGATATTCTTCATTGC
ATGGTCCCCTTCAACCTCTAGAATCCGTGCCAAGATGCTGTACGCCACAT
CTAAAGACAGATTTCGACGGGAGCTGGATGGTATCCACTATGAGATTCAG
GCTACTGATCCTACAGAGATGGATCTTGAAGAGCTTAGAACCCGTGCAAA
CTGAAAAGTCTGCGTTTTTGCAGTTTCTTTCCTCCCATGAAAAAAAAATC
AGCAAGGGGCTCTGCCCTCCAGTTGCTCATTGGTTCCTTATTTTATGGTG
GCAAAAATCTATGCCTAATCTTCAAACAATGGGACATGGGGGGAAAAAAT
ATTGGGGCTTAGGGNTATCTTGGGTGGGCGAAAATAACCTTCCCCACAGG
GTTTATTGGCAACCCCAGAGAAAAAAAAATTTTGGTTGTGGAGGGGATTT
GACAAAAACCCGNTCAAAACAATTAATCCAAGAAAATATGAATACCACAA
AATAAAAAATTAACACATGGCACCTCGAAAACCTCCTCCCAACAAAAAAA
AATTTTATTAATATCAAAAAAAAGGGGGAAAAAAAACAAGGAGAACACAA
AAAAACAGA
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