EY679983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 3.037e-76 Identity = 136/170 (80.00%), Postives = 147/170 (86.47%), Query Frame = 3 Query: 81 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKICWRAP 590 F GKAV L+P +E+ GR++MRKT + SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV L G EGY++ P Sbjct: 13 FAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMG-AVEGYRVAGEGP 181
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 8.825e-76 Identity = 134/167 (80.24%), Postives = 144/167 (86.23%), Query Frame = 3 Query: 81 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKI 575 F GKAV PS + L R++MRKT +K+ VSS SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFS+GGLDYLGNPSL+HAQS+LAIWACQV L G EGY+I Sbjct: 13 FAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMG-AVEGYRI 177 HSP 2 Score: 35.039 bits (79), Expect = 8.825e-76 Identity = 25/65 (38.46%), Postives = 39/65 (60.00%), Query Frame = 2 Query: 605 LNPLYPGGNFESIWGLGE*TRKAFCLTSRVREIKKGKVGLVSPGWVFFFQAICSPAKGTVKKNLD 799 ++PLYPGG+F+ + GL E R +V+EIK G++ + S + FF QAI + KG ++ D Sbjct: 186 VDPLYPGGSFDPL-GLAE--RPQAFAELKVKEIKNGRLAMFSM-FGFFVQAIVT-GKGPLEDLAD 245
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 8.832e-76 Identity = 133/147 (90.48%), Postives = 137/147 (93.20%), Query Frame = 3 Query: 135 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKI 575 GR+SMRKT SK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFSEGGLDYLGN SLIHAQSILAIWA QV L G EGY+I Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMG-AVEGYRI 156 HSP 2 Score: 31.5722 bits (70), Expect = 8.832e-76 Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 2 Query: 608 NPLYPGGNFESIWGLGE*TRKAFCLTSRVREIKKGKVGLVSPGWVFFFQAICSPAKGTVKKNLDKPFGEP 817 +P+YPGG+F+ + L + +AF +V+EIK G++ + S + FF QAI + KG + +NL EP Sbjct: 166 DPIYPGGSFDPL-ALAD-DPEAFA-ELKVKEIKNGRLAMFSM-FGFFVQAIVT-GKGPL-ENLADHLAEP 229
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 1.501e-75 Identity = 132/165 (80.00%), Postives = 140/165 (84.85%), Query Frame = 3 Query: 81 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKI 575 F GKAV S +E+ R+SMRKT + GSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFSEGGL YLGNPSL+HAQSILAIWACQV L G EGY++ Sbjct: 13 FAGKAVKNLSSSSEVQGDARVSMRKTAATK-KVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMG-AVEGYRV 175 HSP 2 Score: 34.6538 bits (78), Expect = 1.501e-75 Identity = 28/72 (38.89%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 584 GPSVKVELNPLYPGGNFESIWGLGE*TRKAFCLTSRVREIKKGKVGLVSPGWVFFFQAICSPAKGTVKKNLD 799 GP +V ++PLYPGG+F+ + GL + +AF +V+EIK G++ + S + FF QAI + KG ++ D Sbjct: 178 GPLGEV-VDPLYPGGSFDPL-GLAD-DAEAFA-ELKVKEIKNGRLAMFSM-FGFFVQAIVT-GKGPLENLAD 243
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 2.554e-75 Identity = 132/149 (88.59%), Postives = 137/149 (91.95%), Query Frame = 3 Query: 135 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKI 575 GRI+MRKT K +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQV L G EGY+I Sbjct: 26 GRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG-AVEGYRI 173 HSP 2 Score: 33.4982 bits (75), Expect = 2.554e-75 Identity = 27/72 (37.50%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 584 GPSVKVELNPLYPGGNFESIWGLGE*TRKAFCLTSRVREIKKGKVGLVSPGWVFFFQAICSPAKGTVKKNLD 799 GP +V ++PLYPGG+F+ + GL + +AF +V+E+K G++ + S + FF QAI + KG ++ D Sbjct: 176 GPLGEV-VDPLYPGGSFDPL-GLAD-DPEAFA-ELKVKELKNGRLAMFSM-FGFFVQAIVT-GKGPLENLAD 241
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 9.634e-75 Identity = 134/173 (77.46%), Postives = 144/173 (83.24%), Query Frame = 3 Query: 87 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKI 575 G+ +L P N+L G R++MRK +K ++ S SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV L G EGY+I Sbjct: 14 GQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMG-AVEGYRI 185 HSP 2 Score: 34.6538 bits (78), Expect = 9.634e-75 Identity = 25/64 (39.06%), Postives = 40/64 (62.50%), Query Frame = 2 Query: 608 NPLYPGGNFESIWGLGE*TRKAFCLTSRVREIKKGKVGLVSPGWVFFFQAICSPAKGTVKKNLD 799 +P+YPGG+F+ + GL E +AF +V+EIK G++ + S + FF QAI + KG ++ D Sbjct: 195 DPIYPGGSFDPL-GLAE-DPEAFA-ELKVKEIKNGRLAMFSM-FGFFVQAIVT-GKGPIENLAD 253
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 2.788e-74 Identity = 134/165 (81.21%), Postives = 141/165 (85.45%), Query Frame = 3 Query: 87 GKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKI 575 GK + L PS EL R +MRK T K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV L G EGY+I Sbjct: 18 GKQLKLNPSSQELG-AARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMG-AVEGYRI 180 HSP 2 Score: 33.4982 bits (75), Expect = 2.788e-74 Identity = 27/72 (37.50%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 584 GPSVKVELNPLYPGGNFESIWGLGE*TRKAFCLTSRVREIKKGKVGLVSPGWVFFFQAICSPAKGTVKKNLD 799 GP +V ++PLYPGG+F+ + GL + +AF +V+E+K G++ + S + FF QAI + KG ++ D Sbjct: 183 GPLGEV-VDPLYPGGSFDPL-GLAD-DPEAFA-ELKVKELKNGRLAMFSM-FGFFVQAIVT-GKGPLENLAD 248
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.842e-74 Identity = 135/171 (78.95%), Postives = 148/171 (86.55%), Query Frame = 3 Query: 81 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKICWRAP 590 F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWA QV L G EGY++ P Sbjct: 13 FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMG-AVEGYRVAGNGP 182
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 1.372e-73 Identity = 133/168 (79.17%), Postives = 143/168 (85.12%), Query Frame = 3 Query: 99 NLAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKI 575 ++ P N+L G R++MRK TG KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV L G EGY++ Sbjct: 23 SVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMG-AIEGYRV 189 HSP 2 Score: 34.6538 bits (78), Expect = 1.372e-73 Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 2 Query: 608 NPLYPGGNFESIWGLGE*TRKAFCLTSRVREIKKGKVGLVSPGWVFFFQAICSPAKGTVKKNLD 799 +P+YPGGNF+ + GL + AF +V+EIK G++ + S + FF QAI + KG ++ D Sbjct: 199 DPIYPGGNFDPL-GLAD-DPDAFA-DVKVKEIKNGRLAMFSM-FGFFVQAIVT-GKGPIENLAD 257
BLAST of EY679983 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 1.372e-73 Identity = 133/168 (79.17%), Postives = 143/168 (85.12%), Query Frame = 3 Query: 99 NLAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVGLDGKPFEGYKI 575 ++ P N+L G R++MRK TG KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV L G EGY++ Sbjct: 23 SVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMG-AIEGYRV 189 HSP 2 Score: 34.6538 bits (78), Expect = 1.372e-73 Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 2 Query: 608 NPLYPGGNFESIWGLGE*TRKAFCLTSRVREIKKGKVGLVSPGWVFFFQAICSPAKGTVKKNLD 799 +P+YPGGNF+ + GL + AF +V+EIK G++ + S + FF QAI + KG ++ D Sbjct: 199 DPIYPGGNFDPL-GLAD-DPDAFA-ELKVKEIKNGRLAMFSM-FGFFVQAIVT-GKGPIENLAD 257 The following BLAST results are available for this feature:
BLAST of EY679983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679983 ID=EY679983; Name=EY679983; organism=Citrus sinensis; type=EST; length=913bpback to top |