EY679959

Overview
NameEY679959
Unique NameEY679959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: GLCP_SYNY3 (Glucose transport protein OS=Synechocystis sp. (strain PCC 6803) GN=gtr PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.842e-14
Identity = 47/155 (30.32%), Postives = 75/155 (48.39%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAGFHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIVAPNLPDCC*TNG 455
            GIN + YYS  + +  GF + + +LL+++     N + T+V I  +D FGRK L L    G+ I+L +LS  F    +           G IA++   LY+  F    GP+ W L  E++ ++ R     +   V WI+N I++   P    T G
Sbjct:  281 GINVIFYYSSVLWRSVGF-TEEKSLLITVITGFINILTTLVAIAFVDKFGRKPLLLMGSIGMTITLGILSVVFGGATVVNGQPTLTGAAGIIALVTANLYVFSFGFSWGPIVWVLLGEMFNNKIRAAALSVAAGVQWIANFIISTTFPPLLDTVG 434          
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.338e-13
Identity = 49/153 (32.03%), Postives = 77/153 (50.33%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAG---------FHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIVAPNLP 434
            GIN V+YY+P I++ AG           S+  +LL+S            V + L+D  GR+ L L+++  +I SL++L    I         V+  ++ + + LY  FF  G GP P  L SE++P + RGIC  +     WI ++IV  +LP
Sbjct:  522 GINGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLPAIAVAMRLMDLSGRRTLLLTTIPILIASLLVL---VISNLVHMNSIVHAVLSTVSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLP 671          
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.747e-13
Identity = 43/140 (30.71%), Postives = 72/140 (51.43%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAGFHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIVA 422
            GI  V+ YSP I + AG  S    LL ++ V  T A   I+  +L+D  GR+KL L+S  G++ +L  L+ +               ++++    ++AFF+ G+GP+ W  +SE++P + R     +   VN I N  V+
Sbjct:  295 GIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMVQRFGRLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVS 434          
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: MYCT_HUMAN (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.747e-13
Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAGFHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI 224
            GINT+MYYS TI+QM+G   ++LA+ L+   A TN + T+VG++L++  GR+KL   SLAG  ++L++L+  F+
Sbjct:  321 GINTIMYYSATILQMSGVEDDRLAIWLASVTAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALIILALGFV 394          

HSP 2 Score: 73.1738 bits (178), Expect = 2.523e-12
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 3
Query:  255 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIVA 422
            Y W A++GL LY+ FFAPGMGP+PWT+NSE+YP   R       + +NWI N++V+
Sbjct:  486 YSWTALLGLILYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSSGINWIFNVLVS 541          
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: GLF_ZYMMO (Glucose facilitated diffusion protein OS=Zymomonas mobilis GN=glf PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.282e-13
Identity = 42/139 (30.22%), Postives = 72/139 (51.80%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAGFHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIV 419
            GIN V+YY+P + Q  GF ++  ALL ++++   N + T++   ++D FGRK L +    G+   + +L   F          V G + +  + LYIA F    GPV W + SE++P   +G    +     W++N++V
Sbjct:  283 GINAVLYYAPQMFQNLGFGADT-ALLQTISIGVVNFIFTMIASRVVDRFGRKPLLIWGALGMAAMMAVLGCCF-------WFKVGGVLPLASVLLYIAVFGMSWGPVCWVVLSEMFPSSIKGAAMPIAVTGQWLANILV 413          
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: MYCT_MOUSE (Proton myo-inositol cotransporter OS=Mus musculus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.980e-13
Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAGFHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI 224
            GINT+MYYS TI+QM+G   ++LA+ L+   A TN + T+VG++L++  GR+KL   SLAG  ++L++L+  F+
Sbjct:  310 GINTIMYYSATILQMSGVEDDRLAIWLASITAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALIILALGFL 383          

HSP 2 Score: 73.559 bits (179), Expect = 1.931e-12
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 3
Query:  255 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIVA 422
            Y W A++GL LY+ FFAPGMGP+PWT+NSE+YP   R         +NWI N++V+
Sbjct:  475 YSWTALVGLVLYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSAGINWIFNVLVS 530          
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.083e-13
Identity = 40/139 (28.78%), Postives = 68/139 (48.92%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAGFHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIV 419
            G+N +MYY+P I +MAGF + +  ++ +L V  T    T + ++ +D  GRK       + + I  ++L +  +            W++V    + IA +A    PV W L SE+ P + R       T  NW+SN+I+
Sbjct:  273 GMNIIMYYAPRIFKMAGFTTTEQQMVATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMAIGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMII 411          
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: RCO3_NEUCR (Probable glucose transporter rco-3 OS=Neurospora crassa GN=rco-3 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 43/144 (29.86%), Postives = 70/144 (48.61%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAGFHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIVAPNLP 434
            G+N +MYY  T    AG  +      +SL +   N   TI G+++++ +GR++L +    G+ I  +L++ AF              + +  +A+YI FFA   GPV W + SE+YP + R     + T  NW  N  +A   P
Sbjct:  296 GVNFIMYYGTTFFNNAGVGN---PFKISLIMQVINTASTIPGLFVVESWGRRRLLMVGAIGMAICQLLIA-AFATASGSNNLSAQNKVLITFVAIYIFFFAASWGPVVWVVTSEIYPLKVRAKSMSITTASNWFLNFGIAYGTP 435          
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: MYCT_RAT (Proton myo-inositol cotransporter OS=Rattus norvegicus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAGFHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI 224
            GINT+MYYS TI+QM+G   ++LA+ L+   A TN + T+VG++L++  GR+KL   SLAG  ++L +L+  F+
Sbjct:  310 GINTIMYYSATILQMSGVEDDRLAIWLASITAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALTILALGFL 383          

HSP 2 Score: 73.559 bits (179), Expect = 1.931e-12
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 3
Query:  255 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIVA 422
            Y W A++GL LY+ FFAPGMGP+PWT+NSE+YP   R         +NWI N++V+
Sbjct:  475 YSWTALVGLVLYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSAGINWIFNVLVS 530          
BLAST of EY679959 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 39/139 (28.06%), Postives = 68/139 (48.92%), Query Frame = 3
Query:    3 GINTVMYYSPTIVQMAGFHSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPDQYRGICGGMPTNVNWISNLIV 419
            G+N +MYY+P I +MAGF + +  ++ +L V  T    T + ++ +D  GRK       + + +  ++L +  +            W++V    + IA +A    PV W L SE+ P + R       T  NW+SN+I+
Sbjct:  273 GMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMII 411          
The following BLAST results are available for this feature:
BLAST of EY679959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GLCP_SYNY37.842e-1430.32Glucose transport protein OS=Synechocystis sp. (st... [more]
MSSP2_ARATH1.338e-1332.03Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
PLT3_ARATH1.747e-1330.71Probable polyol transporter 3 OS=Arabidopsis thali... [more]
MYCT_HUMAN1.747e-1345.95Proton myo-inositol cotransporter OS=Homo sapiens ... [more]
GLF_ZYMMO2.282e-1330.22Glucose facilitated diffusion protein OS=Zymomonas... [more]
MYCT_MOUSE2.980e-1345.95Proton myo-inositol cotransporter OS=Mus musculus ... [more]
ARAE_KLEOX5.083e-1328.78Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]
RCO3_NEUCR6.638e-1329.86Probable glucose transporter rco-3 OS=Neurospora c... [more]
MYCT_RAT6.638e-1345.95Proton myo-inositol cotransporter OS=Rattus norveg... [more]
ARAE_ECOLI6.638e-1328.06Arabinose-proton symporter OS=Escherichia coli (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-H07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679959 ID=EY679959; Name=EY679959; organism=Citrus sinensis; type=EST; length=953bp
CTGGTATCAACACGGTCATGTACTACAGCCCGACAATTGTCCAAATGGCT
GGCTTCCACTCCAACCAGCTAGCGCTTCTCCTATCTCTTGCTGTTGCTGG
TACAAATGCAGTTGGCACAATTGTTGGAATTTATCTTATTGACCATTTTG
GAAGGAAAAAGTTGGCCCTCTCTAGCTTAGCTGGTGTTATTATATCCCTC
GTCTTACTCTCTTGGGCATTCATCAGTGGATCATCTGCTTCTTCAAGTGG
AGTCTATGGTTGGATTGCAGTCATCGGGTTAGCCCTATATATCGCTTTCT
TTGCACCTGGAATGGGACCTGTGCCATGGACTCTGAACTCTGAGGTGTAT
CCTGACCAATACCGTGGAATTTGTGGAGGTATGCCAACTAATGTGAACTG
GATCTCTAATTTGATCGTGGCCCCAAACCTTCCTGATTGTTGCTGAACTA
ATGGGCACTGTATCCCCTTTCTTGGATTCTTGCTGGCATTGCTGTACTTG
TACTCTCGGCTCGTGAATCCGTTTTGTGCCATAAACTCTGGAGACTTACA
CTTTTTTGAATTTAAGTCCAATTTGGATTAAAATGTCCTTGGGGAAATTA
TTAGTACCACATAAATCCCTCTTCAAAACATTGATAAAAGTTCCTGGAAC
ATCGCTTGTGACAATAATGAATCATCTCAAATAACTTTTAATAACCGCTT
TATTACACTATCAAAATCAATACCCCTAACCTGCCCTTATCTATGCGGGA
TCTTTACACAACATAACAACACCCTTTAGCTAAACAACCTCCAATATCCC
TTCTTTTCTTTTTCTTTCCTCTATATTAACTTATAGATACACGGGCTAAC
ATACCCATTTAATCTGAGGAACTGCCATACGGCAAAAAAGCTTAATCGCT
CGCTTACCAAAACACACAAGAACCTCAACACCCGCAACACACCTATATGA
TCT
back to top