EY679934

Overview
NameEY679934
Unique NameEY679934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.416e-66
Identity = 116/182 (63.74%), Postives = 145/182 (79.67%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA--DDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSK 541
            ++T  +L F+ALFISI ATGILEM+W GV I +WWRNEQFWVIGG S+HLFA++QGLLK            SKA   +D EF++LY FKWT+LLIPP TLL+ N+IGV+ GV+DAI+NG E WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI+++W++LLASIFSLLW RI+PF  K
Sbjct:  861 ISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIK 1042          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 2.416e-66
Identity = 113/181 (62.43%), Postives = 150/181 (82.87%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAAD-DGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSK 541
            ++ + ++ F++LF+SI ATGILEM+W GVGI +WWRNEQFWVIGG S+HLFA+ QG+LK            SKA+D DG+F++LYLFKWT+LLIPP TLL+ NL+GV+ GV+ AI++GY++WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI++VW++LLASIFSLLW RI+PF S+
Sbjct:  872 ISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSR 1052          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.416e-66
Identity = 114/180 (63.33%), Postives = 147/180 (81.67%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAAD-DGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVS 538
            ++    + F+ LF SI ATGILE++W GVGI DWWRNEQFWVIGG S+HLFA+ QGLLK            SKA+D DG+F++LY+FKWTSLLIPP T+LV NL+G++ G++ AI++GY++WGPLFGKLFFS+WVIL LYPFLKG +G+Q+R PTI++VW+ILLASIFSLLW +I+PF+S
Sbjct:  882 ISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFIS 1061          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.416e-66
Identity = 114/180 (63.33%), Postives = 147/180 (81.67%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAAD-DGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVS 538
            ++    + F+ LF SI ATGILE++W GVGI DWWRNEQFWVIGG S+HLFA+ QGLLK            SKA+D DG+F++LY+FKWTSLLIPP T+LV NL+G++ G++ AI++GY++WGPLFGKLFFS+WVIL LYPFLKG +G+Q+R PTI++VW+ILLASIFSLLW +I+PF+S
Sbjct:  882 ISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFIS 1061          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 4.121e-66
Identity = 113/181 (62.43%), Postives = 149/181 (82.32%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAAD-DGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSK 541
            ++   ++ F++LFISI ATGILEM+W GVGI +WWRNEQFWVIGG S+HLFA+ QGLLK            SKA+D DG+F++LY+FKWT+LLIPP T+L+ NL+GV+ G++ AI++GY++WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI++VWAILLASIFSLLW RI+PF ++
Sbjct:  888 ISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTR 1068          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 7.029e-66
Identity = 114/179 (63.69%), Postives = 145/179 (81.01%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAAD-DGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFV 535
            ++   ++ F+ LFISIA TGILE++W GV I DWWRNEQFWVIGG S+HLFA+ QGLLK            SKA D DG+F++LY+FKWT+LLIPP T+L+ NLIG++ GV+ A+++GY++WGPLFGKLFF+LWVI  LYPFLKG LG+Q+R PTI++VW++LLASIFSLLW RINPFV
Sbjct:  887 ISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDEDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINPFV 1065          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 2.045e-65
Identity = 111/181 (61.33%), Postives = 149/181 (82.32%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADD-GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSK 541
            ++   ++ F++LF+SI ATGILEM+W GVGI +WWRNEQFWVIGG S+HLFA+ QGLLK            SKA+D+ G+F++LY+FKWT+LLIPP T+L+ NL+GV+ G++ AI++GY++WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI++VWAILLASIFSLLW RI+PF ++
Sbjct:  880 ISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTR 1060          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 2.045e-65
Identity = 111/181 (61.33%), Postives = 149/181 (82.32%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADD-GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSK 541
            ++   ++ F++LF+SI ATGILEM+W GVGI +WWRNEQFWVIGG S+HLFA+ QGLLK            SKA+D+ G+F++LY+FKWT+LLIPP T+L+ NL+GV+ G++ AI++GY++WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI++VWAILLASIFSLLW RI+PF ++
Sbjct:  880 ISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTR 1060          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 4.556e-65
Identity = 111/182 (60.99%), Postives = 144/182 (79.12%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADD--GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSK 541
            L  + ++ F+ALF+SI ATG+LE++W GV I DWWRNEQFWVIGG S+HLFA+ QGLLK            SKAA D    F +LYLFKWT+LL+PP TL++ N++G++ GV+DA++NGY +WGPLFGKLFFS WVIL LYPFLKG +G+Q+R PTI+++W+ILLASIFSL+W RI+PF+ K
Sbjct:  869 LNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKWTTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFIPK 1050          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.772e-65
Identity = 112/188 (59.57%), Postives = 143/188 (76.06%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGDIVFESL 565
            L+ + ++LF+ LFISI  T +LE++W GV I D WRNEQFWVIGG S+HLFA+ QG LK            SK ADD EF +LY+ KWT+LLIPP +LL+ NL+GV+ G +DA++ GYE WGPLFGK+FF+ WVIL LYPFLKG +G+Q+R PTI+++W+ILLAS+FSL+W RINPFVSK D    SL
Sbjct:  791 LSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINPFVSKTDTTSLSL 978          
The following BLAST results are available for this feature:
BLAST of EY679934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CESA9_ORYSI2.416e-6663.74Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA3_ARATH2.416e-6662.43Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA1_ORYSJ2.416e-6663.33Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI2.416e-6663.33Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA8_ORYSJ4.121e-6662.43Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA1_ARATH7.029e-6663.69Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESA2_ORYSJ2.045e-6561.33Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI2.045e-6561.33Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA7_ORYSJ4.556e-6560.99Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA8_ARATH7.772e-6559.57Cellulose synthase A catalytic subunit 8 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-F04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679934 ID=EY679934; Name=EY679934; organism=Citrus sinensis; type=EST; length=978bp
ATTAGCAACTATGCCAGCTCTCCTTTTCATGGCGCTTTTCATATCCATAG
CTGCAACTGGCATTCTTGAAATGCAATGGGGAGGTGTTGGCATACATGAT
TGGTGGAGAAACGAGCAGTTCTGGGTGATTGGTGGTGCTTCATCACACCT
ATTTGCTCTTATCCAGGGTCTGCTTAAGGTCGTAGGGGGAGTTAACACAA
ACTTCACTGTTACTTCCAAAGCGGCAGATGACGGGGAATTTTCTGATCTT
TACCTATTTAAGTGGACGTCGTTGTTGATCCCTCCCTTGACTTTGTTAGT
CTTCAACCTAATTGGCGTCATAATAGGGGTTGCAGATGCTATCAGTAATG
GATACGAGACCTGGGGTCCACTCTTTGGTAAGCTGTTCTTTTCCTTGTGG
GTCATTCTCCAACTTTATCCATTCCTCAAGGGGTTCTTGGGGAAACAGGA
CAGGCTTCCCACAATCCTCTTGGTCTGGGCAATACTTTTAGCTTCAATTT
TCTCACTTTTATGGGCTCGAATCAATCCATTTGTGTCGAAAGGTGATATT
GTATTTGAAAGTTTGTGGGTTGGATTGCAACTGAGCTACACCAATATAGA
AAGTTTAGAAGTATCATGTTTCCATAAGAAGGTATTTTGGCAATTGGATT
AACCGGCGCAGGGTATATTGGCTAAAAAAAAAAATCTGTTACAACGCGGT
TGGTAGTACAGAAAAAATAGGGGGGTGGGTAAAAAAGAATAAACCCACCA
ATCGGGTATAACTACGGTACAGGTTGCTTTTAAAATCCAAAAGAACTAGA
ATTCAAGAAAATCTTAAATATTTTCGTCTTTCCTCCGCATATATTTCTCT
CACCCTTTTTTTTACCACTTAAATATTATGCACCATTAAAAGAAGGACTT
GAACAACCTTTGAGAACTAGTCTCTATTTTTTTCCCCTCACCCAGCCCCA
ACCATATTTGGGTGTTTTGTCTCGTTTT
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