EY679934

Overview
NameEY679934
Unique NameEY679934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 5.038e-64
Identity = 102/182 (56.04%), Postives = 143/182 (78.57%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGD 547
            L+    + F+ LFISI  T +LE++W G+GI DWWRNEQFWVIGG S+HLFA+ QG+LK            +KA DD EF +LY+FKWT++LIPP ++LV NL+GV+ G +DA+++GYE+WGPLFGK+FF++WVI+ LYPFLKG +G+Q+R PTI+++W++LLAS+FSLLW +I+PF+   +
Sbjct:  796 LSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSE 977          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 5.038e-64
Identity = 102/182 (56.04%), Postives = 143/182 (78.57%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGD 547
            L+    + F+ LFISI  T +LE++W G+GI DWWRNEQFWVIGG S+HLFA+ QG+LK            +KA DD EF +LY+FKWT++LIPP ++LV NL+GV+ G +DA+++GYE+WGPLFGK+FF++WVI+ LYPFLKG +G+Q+R PTI+++W++LLAS+FSLLW +I+PF+   +
Sbjct:  796 LSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSE 977          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 3.265e-63
Identity = 111/177 (62.71%), Postives = 141/177 (79.66%), Query Frame = 2
Query:   17 ALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADD--GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSK 541
            ++ F+ALF+SI AT ILE++W GV I+D WRNEQFWVIGG S+HLFA+ QGLLK            SK A D   EF DLYLFKWT+LLIPP TL++ N++GV+ GV+DAI+NGY +WGPLFGKLFF+ WVI+ LYPFLKG +G+Q+R PTI+++W+ILLASIFSL+W RI+PF+ K
Sbjct:  860 SIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPK 1036          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 9.500e-63
Identity = 110/188 (58.51%), Postives = 144/188 (76.60%), Query Frame = 2
Query:    2 LATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAAD-DGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGDIVFES 562
            ++ + +L FM LF SI A+ ILE++W  V + DWWRNEQFWVIGG S+HLFA+ QGLLK            SKA+D DG+F++LY+FKWTSLLIPP T+L+ NL+G++ GV+ AI++GY++WGPL GKL F+ WV+  LYPFLKG LG+Q+R PTI++VW+ LLASIFSLLW RINPFVS   ++  S
Sbjct:  874 ISNLASLCFMLLFASIYASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWVVAHLYPFLKGLLGRQNRTPTIVIVWSALLASIFSLLWVRINPFVSTTGVMSNS 1061          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.902e-43
Identity = 77/180 (42.78%), Postives = 119/180 (66.11%), Query Frame = 2
Query:   20 LLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA----DDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINPFVSKGD 547
            +  +++ +++    +LE++W G+ +H+WWRNEQFWVIGG S+H  A++QGLLK            SK++     D EF+DLY+ KW+ L++PPLT+++ N+I + +G+A  + + +  W  L G +FFS WV+  LYPF KG +G++ R+PTI+ VW+ LL+ I SLLW  INP   K D
Sbjct:  995 IYLLSITLTLCMLSLLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSSAPEDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSGKQD 1174          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.863e-42
Identity = 78/170 (45.88%), Postives = 111/170 (65.29%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAAD---DGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + I++    +LE++W G+ + +WWRNEQFW+IGG S+HL A+IQGLLK            SK+     D EF+DLY+ KWTSL+IPP+T+++ NLI + +G +  I +    W  L G +FFS WV+  LYPF KG +G++ R PTI+ VW+ L+A   SLLW  INP
Sbjct:  962 LIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVIQGLLKVVAGIEISFTLTSKSGGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.177e-42
Identity = 77/170 (45.29%), Postives = 111/170 (65.29%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDG---EFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + I++    +LE++W G+ + +WWRNEQFW+IGG S+HL A++QGLLK            SK+  D    EF+DLY+ KWTSL+IPP+T+++ NLI + +G +  I +    W  L G +FFS WV+  LYPF KG +G++ R PTI+ VW+ L+A   SLLW  INP
Sbjct:  962 LIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.150e-42
Identity = 76/170 (44.71%), Postives = 110/170 (64.71%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADD---GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + +++    +LE++W G+ + +WWRNEQFW+IGG S+HL A++QGLLK            SK+  D    EF+DLY+ KWTSL+IPP+ +++ NLI + +G +  I +    W  L G +FFS WV+  LYPF KG +G++ R PTI+ VW+ LLA   SLLW  INP
Sbjct:  987 LVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.150e-42
Identity = 76/170 (44.71%), Postives = 110/170 (64.71%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADD---GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + +++    +LE++W G+ + +WWRNEQFW+IGG S+HL A++QGLLK            SK+  D    EF+DLY+ KWTSL+IPP+ +++ NLI + +G +  I +    W  L G +FFS WV+  LYPF KG +G++ R PTI+ VW+ LLA   SLLW  INP
Sbjct:  987 LVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.150e-42
Identity = 74/170 (43.53%), Postives = 114/170 (67.06%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDGE---FSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + +++    +LE++W G+G+ +WWRNEQFW+IGG S+HL A++QGLLK            SKA+ + E   F+DLY+ KWT L I PLT+++ NL+ ++IG +  I +    WG L G +FFSLWV+  +YPF KG +G++ ++PTI+ VW+ L++   SLLW  I+P
Sbjct:  855 LCITVTLTLISLLEVKWSGIGLEEWWRNEQFWLIGGTSAHLAAVVQGLLKVIAGIEISFTLTSKASGEDEDDIFADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSLWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISP 1024          
The following BLAST results are available for this feature:
BLAST of EY679934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CESA4_ORYSJ5.038e-6456.04Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI5.038e-6456.04Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ARATH3.265e-6362.71Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESAA_ARATH9.500e-6358.51Probable cellulose synthase A catalytic subunit 10... [more]
CSLD5_ARATH4.902e-4342.78Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLD3_ARATH1.863e-4245.88Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLD2_ARATH3.177e-4245.29Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD2_ORYSJ4.150e-4244.71Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI4.150e-4244.71Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD1_ARATH4.150e-4243.53Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-F04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679934 ID=EY679934; Name=EY679934; organism=Citrus sinensis; type=EST; length=978bp
ATTAGCAACTATGCCAGCTCTCCTTTTCATGGCGCTTTTCATATCCATAG
CTGCAACTGGCATTCTTGAAATGCAATGGGGAGGTGTTGGCATACATGAT
TGGTGGAGAAACGAGCAGTTCTGGGTGATTGGTGGTGCTTCATCACACCT
ATTTGCTCTTATCCAGGGTCTGCTTAAGGTCGTAGGGGGAGTTAACACAA
ACTTCACTGTTACTTCCAAAGCGGCAGATGACGGGGAATTTTCTGATCTT
TACCTATTTAAGTGGACGTCGTTGTTGATCCCTCCCTTGACTTTGTTAGT
CTTCAACCTAATTGGCGTCATAATAGGGGTTGCAGATGCTATCAGTAATG
GATACGAGACCTGGGGTCCACTCTTTGGTAAGCTGTTCTTTTCCTTGTGG
GTCATTCTCCAACTTTATCCATTCCTCAAGGGGTTCTTGGGGAAACAGGA
CAGGCTTCCCACAATCCTCTTGGTCTGGGCAATACTTTTAGCTTCAATTT
TCTCACTTTTATGGGCTCGAATCAATCCATTTGTGTCGAAAGGTGATATT
GTATTTGAAAGTTTGTGGGTTGGATTGCAACTGAGCTACACCAATATAGA
AAGTTTAGAAGTATCATGTTTCCATAAGAAGGTATTTTGGCAATTGGATT
AACCGGCGCAGGGTATATTGGCTAAAAAAAAAAATCTGTTACAACGCGGT
TGGTAGTACAGAAAAAATAGGGGGGTGGGTAAAAAAGAATAAACCCACCA
ATCGGGTATAACTACGGTACAGGTTGCTTTTAAAATCCAAAAGAACTAGA
ATTCAAGAAAATCTTAAATATTTTCGTCTTTCCTCCGCATATATTTCTCT
CACCCTTTTTTTTACCACTTAAATATTATGCACCATTAAAAGAAGGACTT
GAACAACCTTTGAGAACTAGTCTCTATTTTTTTCCCCTCACCCAGCCCCA
ACCATATTTGGGTGTTTTGTCTCGTTTT
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