EY679934

Overview
NameEY679934
Unique NameEY679934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.743e-40
Identity = 75/170 (44.12%), Postives = 108/170 (63.53%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDG---EFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + I++    +LE++W G+ + +WWRNEQFW+IGG S+HL A++QGLLK            SK   D    EF++LY  KWTSL+IPPLT+++ NL+ + +G +  I +    W  L G +FFS WV+  LYPF KG +G++ R PTI+ VW+ L+A   SLLW  I P
Sbjct:  942 LIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP 1111          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.743e-40
Identity = 75/170 (44.12%), Postives = 108/170 (63.53%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAADDG---EFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + I++    +LE++W G+ + +WWRNEQFW+IGG S+HL A++QGLLK            SK   D    EF++LY  KWTSL+IPPLT+++ NL+ + +G +  I +    W  L G +FFS WV+  LYPF KG +G++ R PTI+ VW+ L+A   SLLW  I P
Sbjct:  942 LIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP 1111          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 8.653e-40
Identity = 77/170 (45.29%), Postives = 110/170 (64.71%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA-DDGE--FSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + I++ A GILE++W G+ + DWWRNEQFW+I G S+HL+A++QGLLK            +KAA DD E  ++DLY+ KW+SLLIPP+T+ + N+I +    A  I +    WG   G  FFS WV+  L PF KG +G++ + PTI+ VW+ LL+   SLLW  I+P
Sbjct:  961 LTMTITLVALGILEVKWSGIELEDWWRNEQFWLISGTSAHLYAVVQGLLKVMAGIEISFTLTAKAAADDNEDIYADLYIVKWSSLLIPPITIGMVNIIAIAFAFARTIYSDNPRWGKFIGGGFFSFWVLAHLNPFAKGLMGRRGKTPTIVFVWSGLLSITVSLLWVAISP 1130          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.130e-39
Identity = 69/173 (39.88%), Postives = 111/173 (64.16%), Query Frame = 2
Query:   20 LLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA-----DDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARI 523
            +  + + +S+    +LE++W G+ + +WWRNEQFW+IGG S+HL A++QG+LK            SK++     +D EF+DLYLFKWT+L+IPPLT+++ N++ ++  V   + +    W  L G  FF+ WV+L +YPF KG +G+  + PT++ VW+ L+A   SLL+  I
Sbjct:  794 IYLLIITLSLCGLAVLEVKWSGISLEEWWRNEQFWLIGGTSAHLVAVLQGILKVIAGVEISFTLTSKSSTGGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFASWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 966          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.476e-39
Identity = 76/170 (44.71%), Postives = 109/170 (64.12%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA---DDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + I++    +LE++W G+G+ +WWRNEQFWVIGG S+HL A++QGLLK            +KAA   DD  F++LYL KWTSL IPPL ++  N+I +++GV+  +      +  L G  FFS WV+   YPF KG +G++ R PTI+ VWA L++   SLLW  I+P
Sbjct:  831 LLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP 1000          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.476e-39
Identity = 76/170 (44.71%), Postives = 109/170 (64.12%), Query Frame = 2
Query:   29 MALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA---DDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + + I++    +LE++W G+G+ +WWRNEQFWVIGG S+HL A++QGLLK            +KAA   DD  F++LYL KWTSL IPPL ++  N+I +++GV+  +      +  L G  FFS WV+   YPF KG +G++ R PTI+ VWA L++   SLLW  I+P
Sbjct:  831 LLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP 1000          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.476e-39
Identity = 75/176 (42.61%), Postives = 110/176 (62.50%), Query Frame = 2
Query:   17 ALLFMALFISIAATG--ILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA-DDGE--FSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            + L   L I+I   G  +LE++W G+G+ +WWRNEQ+W+I G SSHL+A++QG+LK            +K+  DD E  ++DLY+ KW+SL+IPP+ + + N+I +++     I      W  L G  FFS WV+  LYPF KG +G++ + PTI+ VWA L+A   SLLW  INP
Sbjct:  917 SFLVYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQGVLKVIAGIEISFTLTTKSGGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINP 1092          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.632e-38
Identity = 74/188 (39.36%), Postives = 112/188 (59.57%), Query Frame = 2
Query:    5 ATMPALLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA-------------DDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARINP 529
            AT  A L + + +++    +LE++W G+ +H+WWRNEQFWVIGG S+H  A++QGLLK            SK               DD  F++LY  +W+ L++PP+T+++ N + + +  A  + + +  W  L G  FFS WV+  LYPF KG LG++ R+PTI+ VW+ L++ I SLLW  INP
Sbjct: 1013 ATFLAFL-LVITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKPGNGGGDGGVGGEGNDDEAFAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSEFPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINP 1199          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.584e-25
Identity = 63/186 (33.87%), Postives = 101/186 (54.30%), Query Frame = 2
Query:   20 LLFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSKAA---------DDGE----FSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNG-YETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRL-PTILLVWAILLASIFSLLWARINPF 532
            +L + L  S+AA+  LE++W  V +  WWR+E+ W++   S+ L A+ QG+L             + A+         DDGE     +     +WT+LL+ P +++V NL GV+  VA  + +G Y++WG L  KL  + WV+  L  FL+G L  +DR  PTI ++W+++  S+ SLLW     F
Sbjct:  661 VLLILLLFSVAASVALELRWSRVPLRAWWRDEKLWMVTATSASLAAVFQGILSACTGIDVAFSTETAASPPKRPAAGNDDGEEEAALASEITMRWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQSWGALGAKLALAGWVVAHLQGFLRGLLAPRDRAPPTIAVLWSVVFVSVASLLWVHAASF 846          
BLAST of EY679934 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.027e-24
Identity = 55/172 (31.98%), Postives = 99/172 (57.56%), Query Frame = 2
Query:   23 LFMALFI-SIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKXXXXXXXXXXXXSK--AADDGE--FSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILQLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARI 523
            +++A+ + ++    +LE++W GV + +W+RN QFW+    S++L A++Q + K            SK  A D+ +  ++DLY+ +WT L+I P+ +++ N+IG  +  A  +   +  W  + G +FF+ WV+  LYPF KG LGK  + P ++LVW      I ++L+  I
Sbjct:  747 VYLAIVLGTLLILAVLEVKWAGVTVFEWFRNGQFWMTASCSAYLAAVLQVVTKVVFRRDISFKLTSKLPAGDEKKDPYADLYVVRWTWLMITPIIIILVNIIGSAVAFAKVLDGEWTHWLKVAGGVFFNFWVLFHLYPFAKGILGKHGKTPVVVLVWWAFTFVITAVLYINI 918          
The following BLAST results are available for this feature:
BLAST of EY679934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CSLD1_ORYSJ1.743e-4044.12Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI1.743e-4044.12Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD3_ORYSJ8.653e-4045.29Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD6_ARATH1.130e-3939.88Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD5_ORYSJ1.476e-3944.71Cellulose synthase-like protein D5 OS=Oryza sativa... [more]
CSLD5_ORYSI1.476e-3944.71Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLD4_ARATH1.476e-3942.61Cellulose synthase-like protein D4 OS=Arabidopsis ... [more]
CSLD4_ORYSJ1.632e-3839.36Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CESAB_ORYSJ1.584e-2533.87Putative cellulose synthase A catalytic subunit 11... [more]
CSLF6_ORYSJ1.027e-2431.98Probable mixed-linked glucan synthase 6 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-F04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679934 ID=EY679934; Name=EY679934; organism=Citrus sinensis; type=EST; length=978bp
ATTAGCAACTATGCCAGCTCTCCTTTTCATGGCGCTTTTCATATCCATAG
CTGCAACTGGCATTCTTGAAATGCAATGGGGAGGTGTTGGCATACATGAT
TGGTGGAGAAACGAGCAGTTCTGGGTGATTGGTGGTGCTTCATCACACCT
ATTTGCTCTTATCCAGGGTCTGCTTAAGGTCGTAGGGGGAGTTAACACAA
ACTTCACTGTTACTTCCAAAGCGGCAGATGACGGGGAATTTTCTGATCTT
TACCTATTTAAGTGGACGTCGTTGTTGATCCCTCCCTTGACTTTGTTAGT
CTTCAACCTAATTGGCGTCATAATAGGGGTTGCAGATGCTATCAGTAATG
GATACGAGACCTGGGGTCCACTCTTTGGTAAGCTGTTCTTTTCCTTGTGG
GTCATTCTCCAACTTTATCCATTCCTCAAGGGGTTCTTGGGGAAACAGGA
CAGGCTTCCCACAATCCTCTTGGTCTGGGCAATACTTTTAGCTTCAATTT
TCTCACTTTTATGGGCTCGAATCAATCCATTTGTGTCGAAAGGTGATATT
GTATTTGAAAGTTTGTGGGTTGGATTGCAACTGAGCTACACCAATATAGA
AAGTTTAGAAGTATCATGTTTCCATAAGAAGGTATTTTGGCAATTGGATT
AACCGGCGCAGGGTATATTGGCTAAAAAAAAAAATCTGTTACAACGCGGT
TGGTAGTACAGAAAAAATAGGGGGGTGGGTAAAAAAGAATAAACCCACCA
ATCGGGTATAACTACGGTACAGGTTGCTTTTAAAATCCAAAAGAACTAGA
ATTCAAGAAAATCTTAAATATTTTCGTCTTTCCTCCGCATATATTTCTCT
CACCCTTTTTTTTACCACTTAAATATTATGCACCATTAAAAGAAGGACTT
GAACAACCTTTGAGAACTAGTCTCTATTTTTTTCCCCTCACCCAGCCCCA
ACCATATTTGGGTGTTTTGTCTCGTTTT
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