EY679920

Overview
NameEY679920
Unique NameEY679920
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 6.602e-19
Identity = 44/123 (35.77%), Postives = 55/123 (44.72%), Query Frame = 2
Query:  407 VGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKL-PFRQCLAL------FVGSLLGACAQFPS---------WGTLPLPPY 727
            VG +YG   ED  TG  +H +GWRS Y    P AF G A  +    + Q  RWA G LEI FS+ N +LA    +L P ++   L      F    L A   FP+         W   P P Y
Sbjct:  519 VGWVYGTVTEDVATGFCMHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLRWAAGSLEIFFSRNNALLAGGRRRLHPLQRAAYLNTTVYPFTSLFLMAYCLFPAIPLIAGGGGWNAAPTPTY 641          

HSP 2 Score: 49.6766 bits (117), Expect = 6.602e-19
Identity = 31/95 (32.63%), Postives = 46/95 (48.42%), Query Frame = 3
Query:   18 GIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEV 302
            G+ G+QGP Y GTG   RR  +YG+   +    G  V  +   KFG S  F+ S           +S +   ++ EA  +  C YE G++WG +V
Sbjct:  431 GLDGLQGPIYVGTGCLFRRVALYGVDPPRWRSPGGGVAAD-PAKFGESAPFLASVR-----AEQSHSRDDGDAIAEASALVSCAYEDGTAWGRDV 519          
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 9.610e-17
Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGACAQFPSWGTLPLPPYWIIPN 742
            ++G +YG+  ED LTG  +H++GW S YC+P    F G A  +    + Q  RWA G +EIL S+  PI     G+L   + LA ++ +++      P      LP   ++ N
Sbjct:  764 EIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLA-YINTIVYPITSIPLIAYCVLPAICLLTN 875          

HSP 2 Score: 43.1282 bits (100), Expect = 9.610e-17
Identity = 44/152 (28.95%), Postives = 54/152 (35.53%), Query Frame = 3
Query:   15 KGIVGIQGPFYQGTGTFHRRDVVYGL--CLDQIEHQGNIV---------------------------------------------EDE---------LLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEV 302
            KG+ GIQGP Y GTG    R  +YG    L + + + NIV                                             EDE         L K+FG S  FI S   T  G     S+N +  L EA  V  CGYE  + WG E+
Sbjct:  616 KGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEADLEPNIVVKSCCGGRKKKSKSYMDSKNRMMKRTESSAPIFNMEDIEEGIEGYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPP--STNPASLLKEAIHVISCGYEDKTEWGKEI 765          
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 9.610e-17
Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGACAQFPSWGTLPLPPYWIIPN 742
            ++G +YG+  ED LTG  +H++GW S YC+P    F G A  +    + Q  RWA G +EIL S+  PI     G+L   + LA ++ +++      P      LP   ++ N
Sbjct:  764 EIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLA-YINTIVYPITSIPLIAYCVLPAICLLTN 875          

HSP 2 Score: 43.1282 bits (100), Expect = 9.610e-17
Identity = 44/152 (28.95%), Postives = 54/152 (35.53%), Query Frame = 3
Query:   15 KGIVGIQGPFYQGTGTFHRRDVVYGL--CLDQIEHQGNIV---------------------------------------------EDE---------LLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEV 302
            KG+ GIQGP Y GTG    R  +YG    L + + + NIV                                             EDE         L K+FG S  FI S   T  G     S+N +  L EA  V  CGYE  + WG E+
Sbjct:  616 KGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEADLEPNIVVKSCCGGRKKKSKSYMDSKNRMMKRTESSAPIFNMEDIEEGIEGYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPP--STNPASLLKEAIHVISCGYEDKTEWGKEI 765          
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 9.648e-17
Identity = 30/70 (42.86%), Postives = 38/70 (54.29%), Query Frame = 2
Query:  407 VGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILA 616
            VG +Y    ED +TG  +H  GWRS YC   P AF G A  +    + Q  RW+ G LE+ FS   P+LA
Sbjct:  567 VGWVYNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLLA 636          

HSP 2 Score: 51.2174 bits (121), Expect = 9.648e-17
Identity = 37/98 (37.76%), Postives = 45/98 (45.92%), Query Frame = 3
Query:   18 GIVGIQGPFYQGTGTFHRRDVVYGLCLDQIE-HQGNIVEDELLKKFGNSKEFIKS--AAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEV 302
            G+ GIQGP Y GTG   RR  +YG+   +     GNIV+    KKFGN   FI S   A   E       +     L E      C YE G+ WG +V
Sbjct:  472 GLNGIQGPSYVGTGCMFRRVALYGVDPPRWRPDDGNIVDSS--KKFGNLDSFISSIPIAANQERSIISPPALEESILQELSDAMACAYEDGTDWGKDV 567          
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.624e-16
Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 2
Query:  404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGACAQFPSWGTLPLPPYWIIP 739
            ++G +YG+  ED LTG  +H +GW+S YC+P   AF G A  +    + Q  RWA G +EI FS+  P+     GKL   + LA ++ +++     +P + ++PL  Y  IP
Sbjct:  737 EIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLA-YINTIV-----YP-FTSIPLLAYCTIP 841          

HSP 2 Score: 39.2762 bits (90), Expect = 1.624e-16
Identity = 27/83 (32.53%), Postives = 39/83 (46.99%), Query Frame = 3
Query:   63 FHRRDVVYGL-CLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGY--SSNISRSLDEAHRVADCGYEYGSSWGDEV 302
            F   D+  GL   D++E    + +    K+FG S  FI S       + GG   ++N S  + EA  V  CGYE  + WG E+
Sbjct:  660 FDLEDIEEGLEGYDELEKSSLMSQKNFEKRFGMSPVFIASTLM----ENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEI 738          
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.110e-16
Identity = 50/165 (30.30%), Postives = 80/165 (48.48%), Query Frame = 2
Query:  404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGACAQFPSWGTLPLPPYWIIPNSHFPAKGPGTQPICSPLHFFLILKINIPY*KVLFSRVFTIPFLGGG*QIGWG 898
            ++G +YG+  ED LTG  +H  GWRS YC+P   AF G A  +    + Q  RWA G +EI  S+  PI     G L + +  + ++ S++     +P W +LPL  Y  +P             +C     F++ +I+  Y  +LF  +F    + G  ++ WG
Sbjct:  773 EIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFS-YINSVV-----YP-WTSLPLIVYCSLP------------AVCLLTGKFIVPEIS-NYAGILFMLMFISIAVTGILEMQWG 917          

HSP 2 Score: 40.817 bits (94), Expect = 2.110e-16
Identity = 25/71 (35.21%), Postives = 36/71 (50.70%), Query Frame = 3
Query:   96 LDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEV 302
            +  +E +    + +L KKFG S  F+ SA      + GG   N S +  L EA +V  CGYE  + WG E+
Sbjct:  708 VSNVEKRSEATQLKLEKKFGQSPVFVASAVL----QNGGVPRNASPACLLREAIQVISCGYEDKTEWGKEI 774          
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.128e-16
Identity = 42/114 (36.84%), Postives = 60/114 (52.63%), Query Frame = 2
Query:  404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGAC--AQFPSWGTLPLPPYWIIP 739
            ++G  YG+  ED  TG ++H +GWRS +C P   AF G +       + QQ RW+ GLLE+ FS+ NP+     G  P    ++      LG C  A +P W  +PL  Y I+P
Sbjct:  426 KIGFRYGSLVEDYFTGFMLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNPL---TYGIKPLSLLMS------LGYCHYAFWPFW-CIPLVVYGILP 529          

HSP 2 Score: 39.2762 bits (90), Expect = 2.128e-16
Identity = 31/103 (30.10%), Postives = 43/103 (41.75%), Query Frame = 3
Query:   18 GIVGIQGPFYQGTGTFHRRDVVYG----LCLDQIEHQG-NIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVSIK 311
            G  G+ GP + GTG F  R   YG    L L +IE  G N + D+ +K            AQ +              L  AH VA C YE  ++WG ++  +
Sbjct:  354 GFDGLMGPVHMGTGCFFNRRAFYGPPTTLILPEIETFGPNRIADKPIK------------AQDI--------------LALAHDVAGCNYECNTNWGSKIGFR 430          
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.753e-16
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 2
Query:  407 VGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILA 616
            VG +Y    ED +TG  +H KGWRS YC   P AF G A  +    + Q  RW+ G LE+ FS+  P+LA
Sbjct:  555 VGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLA 624          

HSP 2 Score: 46.2098 bits (108), Expect = 2.753e-16
Identity = 35/106 (33.02%), Postives = 49/106 (46.23%), Query Frame = 3
Query:   18 GIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLK------KFGNSKEFIKS--AAQTLE---GKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEV 302
            G+ G+QGP Y GTG   RR  +YG    +        ED+  K      ++GNS  FI +  AA + E         S + + ++ E   V  C YE G+ WGD V
Sbjct:  455 GLNGVQGPSYVGTGCMFRRVALYGADPPRWR-----PEDDDAKALGCPGRYGNSMPFINTIPAAASQERSIASPAAASLDETAAMAEVEEVMTCAYEDGTEWGDGV 555          
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.016e-15
Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = 2
Query:  404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGACAQFPSWGTLPLPPYWIIPNSHFPAKGPGTQPICSPLHFFLILKINIPY*KVLFSRVFTIPFLGGG*QIGWG 898
            ++G +YG+  ED LTG  +H  GWRS YC+P   AF G A  +    + Q  RWA G +EI  S+  PI     G L + +  + ++ S++     +P W +LPL  Y  +P             IC     F++ +I+  Y  +LF  +F    + G  ++ WG
Sbjct:  777 EIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFS-YINSVV-----YP-WTSLPLLVYCSLP------------AICLLTGKFIVPEIS-NYAGILFLLMFMSIAVTGILEMQWG 921          

HSP 2 Score: 38.5058 bits (88), Expect = 1.016e-15
Identity = 24/74 (32.43%), Postives = 36/74 (48.65%), Query Frame = 3
Query:   87 GLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEV 302
            GL +   E+     + +L KKFG S   + S         GG  SN++ +  L E+ +V  CGYE  + WG E+
Sbjct:  709 GLQVTNAENNSETAQLKLEKKFGQSPVLVASTLLL----NGGVPSNVNPASLLRESIQVISCGYEEKTEWGKEI 778          
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.017e-15
Identity = 41/132 (31.06%), Postives = 66/132 (50.00%), Query Frame = 2
Query:  404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGACAQFPSWGTLPLPPYWIIPNSHFPAKGPGTQPICSPLHF 799
            ++G +YG+  ED LTG  +H++GW S YC+P   AF G A  +    + Q  RWA G +EIL S+  PI     G+L   + +A ++ +++      P      LP + +I N+    +      +C  L F
Sbjct:  756 EIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIA-YINTIVYPITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLF 886          

HSP 2 Score: 34.6538 bits (78), Expect = 1.017e-15
Identity = 22/60 (36.67%), Postives = 30/60 (50.00%), Query Frame = 3
Query:  123 IVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEV 302
            + +  L K+FG S  FI  AA  +E      ++N    L EA  V  CGYE  + WG E+
Sbjct:  700 VSQKRLEKRFGQSPVFI--AATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTDWGKEI 757          
The following BLAST results are available for this feature:
BLAST of EY679920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
CSLF7_ORYSJ6.602e-1935.77Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]
CESA1_ORYSJ9.610e-1732.74Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI9.610e-1732.74Probable cellulose synthase A catalytic subunit 1 ... [more]
CSLF8_ORYSJ9.648e-1742.86Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]
CESA4_ARATH1.624e-1635.71Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA2_ARATH2.110e-1630.30Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CSLG2_ARATH2.128e-1636.84Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CSLF9_ORYSJ2.753e-1644.29Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]
CESA9_ARATH1.016e-1530.91Probable cellulose synthase A catalytic subunit 9 ... [more]
CESAA_ARATH1.017e-1531.06Probable cellulose synthase A catalytic subunit 10... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-E01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679920 ID=EY679920; Name=EY679920; organism=Citrus sinensis; type=EST; length=916bp
CCCGCGTCCGCGGGAAAGGAATTGTGGGAATTCAAGGACCTTTCTATCAG
GGTACAGGAACTTTTCATAGACGAGATGTTGTATATGGTCTATGCCTCGA
TCAGATTGAACATCAAGGAAATATAGTGGAAGATGAGCTGCTGAAAAAAT
TCGGAAATTCAAAAGAATTCATCAAATCAGCTGCTCAGACTTTGGAAGGG
AAGACAGGAGGTTATTCAAGTAACATATCGAGATCGCTTGATGAAGCACA
CCGAGTTGCAGATTGTGGTTATGAGTATGGTAGTAGCTGGGGTGATGAGG
TTAGTATAAAGAATAAAATTTGCAAAATTTTGTTAAACTTGTTTTTTAGT
CAAAACCTGTACGTTCACCACATATATTGTGGCCGTACGTATATTTGTGA
TTTCAGGTGGGGTGCTTGTATGGCGCCACAGCAGAAGATAACTTAACTGG
CTTGGTGATCCATTCAAAAGGCTGGAGATCAGGCTACTGCTTGCCGATCC
CACATGCCTTTCTTGGCTGTGCGTCTCCCAGCGGCCCTGCTGGGATGAGA
CAACAGAAAAGGTGGGCCACGGGACTGCTTGAAATCCTATTCAGCAAACG
TAACCCCATATTGGCTACTCTCATCGGGAAGCTCCCATTTCGACAATGTT
TGGCTTTATTTGTGGGATCCTTACTTGGGGCTTGCGCTCAATTCCCGAGC
TGGGGCACATTGCCCCTTCCGCCTTATTGGATCATCCCCAACTCCCATTT
TCCGGCAAAAGGTCCAGGAACCCAACCGATTTGTTCCCCCTTGCACTTTT
TTTTGATCCTAAAAATTAATATACCCTATTAAAAGGTACTTTTCAGCCGG
GTTTTTACCATCCCGTTTCTGGGGGGGGGTTAACAAATTGGTTGGGGCCC
AAAATTGTTCCCACAA
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