EY679920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 2.488e-13 Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 2 Query: 407 VGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPIL 613 VG +Y ED +TG IH +GWRS YC AF G A + + Q RW+ G LE+ FS NP++ Sbjct: 563 VGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLI 631 HSP 2 Score: 38.5058 bits (88), Expect = 2.488e-13 Identity = 28/93 (30.11%), Postives = 42/93 (45.16%), Query Frame = 3 Query: 27 GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISR-SLDEAHRVADCGYEYGSSWGDEV 302 G+QGP Y GTG RR +YG+ Q NI + KFGNS ++S + L S ++ ++E V ++ + WG V Sbjct: 474 GLQGPSYLGTGCMFRRLALYGIDPPH-WRQDNITPES--SKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGV 563
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.232e-13 Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 2 Query: 407 VGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPIL 613 VG +Y ED +TG IH +GWRS YC AF G A + + Q RW+ G LE+ FS NP++ Sbjct: 563 VGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLI 631 HSP 2 Score: 38.1206 bits (87), Expect = 3.232e-13 Identity = 28/93 (30.11%), Postives = 42/93 (45.16%), Query Frame = 3 Query: 27 GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISR-SLDEAHRVADCGYEYGSSWGDEV 302 G+QGP Y GTG RR +YG+ Q NI + KFGNS ++S + L S ++ ++E V ++ + WG V Sbjct: 474 GLQGPSYLGTGCMFRRLALYGIDPPH-WRQDNITPE--ASKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGV 563
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 9.229e-13 Identity = 29/64 (45.31%), Postives = 36/64 (56.25%), Query Frame = 2 Query: 407 VGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSK 598 +G YG AED +TGL IH +GW S + P AFLG A + + Q KRW+ G L I SK Sbjct: 441 IGVKYGFPAEDIITGLAIHCRGWESAFINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSK 504 HSP 2 Score: 36.965 bits (84), Expect = 9.229e-13 Identity = 22/98 (22.45%), Postives = 45/98 (45.92%), Query Frame = 3 Query: 18 GIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVSIK 311 G+ + G Y GTG FHRR+++ G SK++ ++ + ++ + NI+ ++A + C YE+ + WG+++ +K Sbjct: 370 GLDSVGGCLYIGTGCFHRREILCGRIF--------------------SKDYKENWNRGIKERG---KENINEIEEKATSLVTCTYEHRTQWGNDIGVK 444
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12 Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 2 Query: 407 VGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILAT 619 +G +YG ED +TG +H KGWRS YC PHAF+G A + + Q RW+TG LEI FS+ NP+ + Sbjct: 626 IGWVYGTVTEDVVTGYRMHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIFFSRNNPLFGS 696
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11 Identity = 53/165 (32.12%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGACAQFPSWGTLPLPPYWIIPNSHFPAKGPGTQPICSPLHFFLILKINIPY*KVLFSRVFTIPFLGGG*QIGWG 898 ++G +YG+ ED LTG +HS GWRS YC P AF G A + + Q RWA G +EI S+ PI G L + + L+ ++ S++ +P W +LPL Y +P IC F++ +I+ Y +LF +F+ + G ++ WG Sbjct: 774 EIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLS-YINSVV-----YP-WTSLPLIVYCSLP------------AICLLTGKFIVPEIS-NYASILFMALFSSIAITGILEMQWG 918
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11 Identity = 41/113 (36.28%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGACAQFPSWGTLPLPPYWIIPN 742 ++G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L F + A +V + + P LP + N Sbjct: 754 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFA-YVNTTIYPITSIPLLMYCTLPAVCLFTN 865
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 2 Query: 404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLA 655 ++G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L F + A Sbjct: 770 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFA 853
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 2 Query: 404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLA 655 ++G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L F + A Sbjct: 762 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFA 845
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 2 Query: 404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLA 655 ++G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L F + A Sbjct: 762 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFA 845
BLAST of EY679920 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11 Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 404 QVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLPFRQCLALFVGSLLGACAQFPSWGTLPLPPYWIIP 739 ++G +YG+ ED LTG +H GWRS YC+P AF G A + + Q RWA G +EI FSK P+ G L F + + ++ S++ +P W ++PL Y +P Sbjct: 781 EIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFS-YINSIV-----YP-WTSIPLLAYCTLP 885 The following BLAST results are available for this feature:
BLAST of EY679920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679920 ID=EY679920; Name=EY679920; organism=Citrus sinensis; type=EST; length=916bpback to top |