EY679918

Overview
NameEY679918
Unique NameEY679918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SALHS (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella heidelberg (strain SL476) GN=rihA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.487e-31
Identity = 81/187 (43.32%), Postives = 109/187 (58.29%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            IIID DPG DDA+A++LAL SPE+EV  +T+  GN       RN L +L +  R DIPVA G+   + +  +L IAD VHG  GL       P   P + +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA A+ GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 IIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMAL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SHESR (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Shewanella sp. (strain MR-7) GN=rihA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.472e-31
Identity = 80/189 (42.33%), Postives = 110/189 (58.20%), Query Frame = 2
Query:   53 KKIIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            + II+D DPG DDA+A++LAL  PE+  + +TT  GN       +NAL +L +  R+DIPVA G+   +++  +L IAD VHG  GL       P  +P A +A + + E+       +T+V  GPLTNIAL +         I +IV++GGA  V GN  PAAE NIF DP+AADIVF  G  +   G
Sbjct:    3 RPIILDCDPGHDDAIALILALAHPELNPLAVTTSAGNQTPDKTLKNALRILTLLNRSDIPVAGGAVKPLSR--ELMIADNVHGETGLDGPALPAPSFQPQAVNAVELMAEKIRQSDKPVTLVPTGPLTNIALLLASHGELHAKIERIVLMGGAAGV-GNWTPAAEFNIFVDPEAADIVFKSGIPITMCG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SHESM (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Shewanella sp. (strain MR-4) GN=rihA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.445e-30
Identity = 80/189 (42.33%), Postives = 109/189 (57.67%), Query Frame = 2
Query:   53 KKIIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            + II+D DPG DDA+A++LAL  PE+  + +TT  GN        NAL +L +  R+DIPVA G+   +++  +L IAD VHG  GL       P  +P A +A + + E+       +T+V  GPLTNIAL +         I +IV++GGA  V GN  PAAE NIF DP+AADIVF  G  +   G
Sbjct:    3 RPIILDCDPGHDDAIALILALAHPELNPLAVTTSAGNQTPDKTLNNALRILTLLNRSDIPVAGGAVKPLSR--ELMIADNVHGETGLDGPALPAPSFQPQAVNAVELMAEKIRQSDKPVTLVPTGPLTNIALLLASHGELHAKIERIVLMGGAAGV-GNWTPAAEFNIFVDPEAADIVFKSGIPITMCG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SHESA (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Shewanella sp. (strain ANA-3) GN=rihA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.445e-30
Identity = 80/189 (42.33%), Postives = 109/189 (57.67%), Query Frame = 2
Query:   53 KKIIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            + II+D DPG DDA+A++LAL  PE+  + +TT  GN        NAL +L +  R+DIPVA G+   +++  +L IAD VHG  GL       P  +P A +A + + E+       +T+V  GPLTNIAL +         I +IV++GGA  V GN  PAAE NIF DP+AADIVF  G  +   G
Sbjct:    3 RPIILDCDPGHDDAIALILALAHPELTPLAVTTSAGNQTPDKTLNNALRILTLLNRSDIPVAGGAVKPLSR--ELMIADNVHGETGLDGPALPAPSFQPQAVNAVELMAEKIRQSDKPVTLVPTGPLTNIALLLASHAELHAKIERIVLMGGAAGV-GNWTPAAEFNIFVDPEAADIVFKSGIPITMCG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SALAR (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=rihA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.445e-30
Identity = 80/187 (42.78%), Postives = 109/187 (58.29%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            II+D DPG DDA+AI+LAL SPE++V  +T+  GN       RN L +L +  R+DIPVA G+   + +  +L IAD VHG  GL       P   P   +A + + +     P  +T+VA GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  V+  G
Sbjct:    5 IILDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPDKTLRNVLRMLTLLKRSDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPSFAPQNCTAVELMAKTLRESPQPVTLVATGPQTNVALLLNSHPELHAKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVLMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SALSV (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella schwarzengrund (strain CVM19633) GN=rihA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30
Identity = 80/187 (42.78%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            IIID DPG DDA+A++LAL SPE+EV  +T+  GN       RN L +L +  R DIPVA G+   + +  +L IAD VHG  GL       P   P + +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 IIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPDKTLRNVLRMLTLLKRPDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SALPK (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella paratyphi A (strain AKU_12601) GN=rihA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30
Identity = 80/187 (42.78%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            IIID DPG DDA+A++LAL SPE+EV  +T+  GN       RN L +L +  R DIPVA G+   + +  +L IAD VHG  GL       P   P + +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 IIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHAKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SALPC (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella paratyphi C (strain RKS4594) GN=rihA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30
Identity = 80/187 (42.78%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            IIID DPG DDA+A++LAL SPE+EV  +T+  GN       RN L +L +  R DIPVA G+   + +  +L IAD VHG  GL       P   P + +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 IIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SALPA (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella paratyphi A GN=rihA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30
Identity = 80/187 (42.78%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            IIID DPG DDA+A++LAL SPE+EV  +T+  GN       RN L +L +  R DIPVA G+   + +  +L IAD VHG  GL       P   P + +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 IIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHAKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SALCH (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella choleraesuis GN=rihA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30
Identity = 80/187 (42.78%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            IIID DPG DDA+A++LAL SPE+EV  +T+  GN       RN L +L +  R DIPVA G+   + +  +L IAD VHG  GL       P   P + +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 IIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
The following BLAST results are available for this feature:
BLAST of EY679918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
RIHA_SALHS6.487e-3143.32Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SHESR8.472e-3142.33Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SHESM1.445e-3042.33Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SHESA1.445e-3042.33Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALAR1.445e-3042.78Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALSV1.887e-3042.78Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALPK1.887e-3042.78Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALPC1.887e-3042.78Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALPA1.887e-3042.78Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALCH1.887e-3042.78Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-D11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679918 ID=EY679918; Name=EY679918; organism=Citrus sinensis; type=EST; length=899bp
TCATTTGAGTCGAATCCAAAAGAAAAGAAAGAAAATAATGGCAACAGAAC
CGAAGAAGATCATCATTGACACTGACCCTGGTGTTGATGATGCCATGGCT
ATACTTCTGGCCTTGAGGTCACCTGAAGTGGAGGTTATTGGACTTACTAC
AATTTATGGCAACGTTTATACAACTCTTGCCACCAGGAACGCCTTGCATT
TGTTGGAGATTGCAGGGAGGACTGATATCCCGGTGGCTGAAGGATCCCAT
GTCACCATCACCCAAGGTACAAAACTTCGCATTGCTGATTTTGTCCATGG
TGCTGACGGACTTGGCAACCAGAATTTCCATCCACCAAAAGGGAAGCCAA
TTGCACAGTCAGCAGCTGATTTTATTGTTGAGCAAGCAAATCTTTACCCT
GGGAAAATTACTGTGGTTGCATTGGGGCCACTAACAAATATTGCATTGGC
TATTCAACAAGATCCTGCATTTGTTAAAAACATTGGGCAGATAGTTATTC
TTGGTGGTGCTTTTGCAGTAAATGGGAATGTTAACCCAGCAGCAGAGGCC
AATATTTTTGGTGATCCAGATGCTGCAGATATTGTATTCACATGTGGAGC
AGATGTTGTGGGTGTGGGGTATTAATGTTACGCATCAATTTGTTATGAAC
AGATGCTGATAAAAAACATTTGGTTTGTTCAAATGGAAAACATGCCCCAT
TATTTATGCCAAATCTTAAGGGCCTCTTCCCCTTACCTCATGGAGGCCTA
ACATAACAAAAGGGGGTTTAACCTTCTGGAATCCCACACCTCTTCTTAAA
GCTTGTTAACCCTTCCCTTATTTCCCCTTTAACGGGGAAGGGCCTTCTTT
TTAAATCCCAAAACTAAGGGGGCTTTTAAAAGGGGGAGACCCCCATTTT
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