EY679897

Overview
NameEY679897
Unique NameEY679897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679897 vs. ExPASy Swiss-Prot
Match: AAKG2_PONAB (5'-AMP-activated protein kinase subunit gamma-2 OS=Pongo abelii GN=PRKAG2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11
Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = 3 
Query:   27 KVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK 458
            K+V  D  L VK+AF  L   G+  APLW+  K  FVG+L+ +DFI IL     + S + +  ELE H I  W+E   YL            +PLV   P+ +L D    ++ N++  +P+I   S +      L+I +   ILK
Sbjct:  234 KLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRY--YKSPMVQIYELEEHKIETWRE--LYLQETF--------KPLVNISPDASLLDAVYSLIKNKIHRLPVIDPISGNA-----LYILTHKRILK 361
[Close]
BLAST of EY679897 vs. ExPASy Swiss-Prot
Match: AAKG2_MOUSE (5'-AMP-activated protein kinase subunit gamma-2 OS=Mus musculus GN=Prkag2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = 3 
Query:   27 KVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK 458
            K+V  D  L VK+AF  L   G+  APLW+  K  FVG+L+ +DFI IL     + S + +  ELE H I  W+E   YL            +PLV   P+ +L D    ++ N++  +P+I   S +      L+I +   ILK
Sbjct:  276 KLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRY--YKSPMVQIYELEEHKIETWRE--LYLQETF--------KPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNA-----LYILTHKRILK 403
[Close]
BLAST of EY679897 vs. ExPASy Swiss-Prot
Match: AAKG2_HUMAN (5'-AMP-activated protein kinase subunit gamma-2 OS=Homo sapiens GN=PRKAG2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = 3 
Query:   27 KVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILK 458
            K+V  D  L VK+AF  L   G+  APLW+  K  FVG+L+ +DFI IL     + S + +  ELE H I  W+E   YL            +PLV   P+ +L D    ++ N++  +P+I   S +      L+I +   ILK
Sbjct:  279 KLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRY--YKSPMVQIYELEEHKIETWRE--LYLQETF--------KPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNA-----LYILTHKRILK 406
The following BLAST results are available for this feature:
BLAST of EY679897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
AAKG2_PONAB5.903e-1133.795'-AMP-activated protein kinase subunit gamma-2 OS... [more]
AAKG2_MOUSE7.709e-1133.795'-AMP-activated protein kinase subunit gamma-2 OS... [more]
AAKG2_HUMAN7.709e-1133.795'-AMP-activated protein kinase subunit gamma-2 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-C02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679897 ID=EY679897; Name=EY679897; organism=Citrus sinensis; type=EST; length=923bp
CGGACGCGTGGGCGGACGCGTGGGGCAAGGTTGTAGCATTGGACATTGAT
CTACCTGTAAAACAAGCATTTCATATACTTTATGAGCAGGGTATCTCCAT
GGCTCCTCTTTGGGACTTCAGCAAGGCGCGGTTTGTTGGAGTTCTTAGTG
CGTCAGATTTTATATTGATTTTAAGAGAGCTTGGAAATCATGGCTCAAAT
CTCACAGAGGAAGAGCTTGAAACACACACCATATCTGCCTGGAAAGAGGG
GAAAGCGTATTTGAACAGACAAATTGATAGTCATGGGAAAGCATTTCCAA
GACCTCTTGTTTATGCGGGGCCGAATGATAACTTGAAGGATGTAGCGCGA
AAGATTTTGCATAATGAGGTGGCTACAGTTCCCATCATCCATTCATCTTC
ACAGGACGGTTCATTTCCTCAGCTACTACATATTGCATCCCTTTCTGGAA
TTCTAAAATGTGTTTGCAGGTATTTTAGGCATTGTTCTAGCTCGTTGCCC
ATTCTAAAGTTACCAATTTGTGCAATTCCTGTGGGTACTTGGGTTCCAAA
GATTGGAGAGCCTAATCGACGACCATTGGCAATGTTGAGACCTAGTGCTT
CTCTTAGTGCTGCATTAATTTTGTTTAGTCCCAGCTCAAGTAATTTCGAT
ACCCATAGTTGATGACAACAACTCGTTACTTTGAATCTACTGGCCGGAGT
GAAATTACCGGCTTTGGGAAAAGGACAAAGCTTATGCACACATTTAATCC
CAGTGGAAATGCCCTTTTCCTCGGGCATTTGCATTGGGGAAAAAATTCCT
ATTTCCCCTTTAGAAATTTGAAAAATTCAAAAAAGGCAAAAAAGTGGTTT
GCCGGCAAAAAACTTTTGGAAAAAAAGGGAAGGGAGGCGGTTGGGGAAAA
CCCCCGGGGGGTTTCCAGCGGGT
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