EY679882

Overview
NameEY679882
Unique NameEY679882
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.898e-38
Identity = 83/174 (47.70%), Postives = 112/174 (64.37%), Query Frame = 3
Query:  117 GAGFDDEKSLLMSQMSLEKRFGQSAVFVAST--------------LMENGG------VPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN 578
            G   DD++ + +S +   K+FG S   + S                ++NG       +P+     + + EAI VISC YEDKTEWGS IGWIYGSVTED++TG++MH RGW+S+YC+ KR AF+G+APINL+DRL+QVLRWA GSVEI FSR+   +     R+K L+R AY+N
Sbjct:  752 GGDSDDDEEMNLSLVP--KKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFF--ASPRMKILQRIAYLN 921          

HSP 2 Score: 22.3274 bits (46), Expect = 4.898e-38
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  586 IYPLTAIPLLMYWTLPAV 639
            IYP T+  L++Y  LPA+
Sbjct:  924 IYPFTSFFLIVYCFLPAL 941          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.808e-37
Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 3
Query:  165 LEKRFGQSAVFVAST-LMENGGVPQSATHETLL-------------------KEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN 578
            + K+FG S++ V S  + E  G P +  H + L                    EA++VISC YEDKTEWG  +GWIYGSVTED++TGF+MH +GWRS YC+ +  AF+GSAPINL+DRL+QVLRWA GSVEI FSR+  I+   G +LK L+R AY+N
Sbjct:  601 IRKQFGSSSMLVNSVKVAEFEGRPLATVHSSRLGRPPGSLTGSRKPLDFATVNEAVNVISCWYEDKTEWGFNVGWIYGSVTEDVVTGFRMHEKGWRSFYCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIF--AGPKLKLLQRIAYLN 756          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 4.063e-37
Identity = 79/163 (48.47%), Postives = 109/163 (66.87%), Query Frame = 3
Query:  150 MSQMSLEKRFGQSAVFVAST--------------LMENGGVPQSAT--HETL----LKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN 578
            M+  S  K+FG S+  + S                ++NG  P + T   ETL    + EAI V+SC YE+KTEWG+ +GWIYGSVTED++TG++MH RGW+S+YC+  R AF+G+APINL+DRL+QVLRWA GSVEI FSR+  ++     ++K L+R AY+N
Sbjct:  741 MNMASFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALF--ASSKMKVLQRIAYLN 901          

HSP 2 Score: 23.483 bits (49), Expect = 4.063e-37
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  586 IYPLTAIPLLMYWTLPAV 639
            IYP T++ L++Y  LPA+
Sbjct:  904 IYPFTSVFLIVYCFLPAL 921          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 4.063e-37
Identity = 79/163 (48.47%), Postives = 109/163 (66.87%), Query Frame = 3
Query:  150 MSQMSLEKRFGQSAVFVAST--------------LMENGGVPQSAT--HETL----LKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN 578
            M+  S  K+FG S+  + S                ++NG  P + T   ETL    + EAI V+SC YE+KTEWG+ +GWIYGSVTED++TG++MH RGW+S+YC+  R AF+G+APINL+DRL+QVLRWA GSVEI FSR+  ++     ++K L+R AY+N
Sbjct:  741 MNMASFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALF--ASSKMKVLQRIAYLN 901          

HSP 2 Score: 23.483 bits (49), Expect = 4.063e-37
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  586 IYPLTAIPLLMYWTLPAV 639
            IYP T++ L++Y  LPA+
Sbjct:  904 IYPFTSVFLIVYCFLPAL 921          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 4.066e-37
Identity = 80/160 (50.00%), Postives = 105/160 (65.62%), Query Frame = 3
Query:  159 MSLEKRFGQSAVFVAST--------------LMENGG------VPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN 578
            + L K+FG S +F  +                ++NG       +P+       + EAI VISC YED TEWG  IGWIYGSVTED++TG++MH RGWRS+YC+ KR AF+G+APINL+DRL+QVLRWA GSVEI FS++  ++     RLKFL+R AY+N
Sbjct:  657 LGLPKKFGNSTMFTDTIPVAEYQGRPLADHMSVKNGRPPGALLLPRPPLDAPTVAEAIAVISCWYEDNTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAMF--ATRRLKFLQRVAYLN 814          

HSP 2 Score: 23.483 bits (49), Expect = 4.066e-37
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  586 IYPLTAIPLLMYWTLPAV 639
            IYP T+I L++Y  LPA+
Sbjct:  817 IYPFTSIFLVVYCFLPAL 834          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.067e-37
Identity = 68/117 (58.12%), Postives = 90/117 (76.92%), Query Frame = 3
Query:  228 VPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN 578
            +P+       + E++ VISC YED TEWG  +GWIYGSVTED++TG++MH RGWRS+YC+ +R AF+G+APINL+DRL+QVLRWA GSVEI FS++  +      RLKFL+R AY+N
Sbjct:  676 MPRPPLDAATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVL--ASRRLKFLQRMAYLN 790          

HSP 2 Score: 25.409 bits (54), Expect = 4.067e-37
Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  553 FLRGLLM*TPPIYPLTAIPLLMYWTLPAV 639
            FL+ +      IYP T++ L+MY  LPA+
Sbjct:  782 FLQRMAYLNVGIYPFTSLFLIMYCLLPAL 810          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.067e-37
Identity = 68/117 (58.12%), Postives = 90/117 (76.92%), Query Frame = 3
Query:  228 VPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN 578
            +P+       + E++ VISC YED TEWG  +GWIYGSVTED++TG++MH RGWRS+YC+ +R AF+G+APINL+DRL+QVLRWA GSVEI FS++  +      RLKFL+R AY+N
Sbjct:  676 MPRPPLDAATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVL--ASRRLKFLQRMAYLN 790          

HSP 2 Score: 25.409 bits (54), Expect = 4.067e-37
Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  553 FLRGLLM*TPPIYPLTAIPLLMYWTLPAV 639
            FL+ +      IYP T++ L+MY  LPA+
Sbjct:  782 FLQRMAYLNVGIYPFTSLFLIMYCLLPAL 810          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 8.978e-37
Identity = 82/186 (44.09%), Postives = 112/186 (60.22%), Query Frame = 3
Query:   81 IFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLK--------------------EAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN 578
            + + +D E   +    +D  + L S + + +RFG S+ F+AS  +        A H  +L                     EA+ VISC YEDKTEWG  +GWIYGSVTED++TG++MH RGWRS+YC+ KR AF G+APINL+DRL+QVLRWA GSVEI FSR+    +    +L  L+R +Y+N
Sbjct:  738 VTTFKDPESDTQTLKAEDFDAELTSHL-VPRRFGNSSPFMASIPVAEFQARPLADHPAVLHGRPSGALTVPRPPLDPPTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRNNA--FLASRKLMLLQRISYLN 920          

HSP 2 Score: 25.409 bits (54), Expect = 8.978e-37
Identity = 21/70 (30.00%), Postives = 40/70 (57.14%), Query Frame = 1
Query:  586 IYPLTAIPLLMYWTLPAVWSINEQSSLCLKLVPLPV*WLFSLFLPISPLGIRGMEGEW-GLDPKKGGKNQ 792
            IYP T+I LL+Y  +PA+ S+     +  KL    + +L ++ + +  LGI  +E +W G++ +   +N+
Sbjct:  923 IYPFTSIFLLVYCFIPAL-SLFSGFFIVQKLDIAFLCYLLTMTITLVALGI--LEVKWSGIELEDWWRNE 989          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.442e-33
Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 3
Query:  174 RFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTT-------YLSSHCNSSSHVLDAAG 635
            +FG+SA F+AS   E      S      + EA  ++SC YED T WG ++GW+YG+VTED+ TGF MH RGWRS Y      AF+G+APINL+DRL+QVLRWA GS+EI FSR+  +  G   RL  L+R AY+NTT       +L ++C   +  L A G
Sbjct:  473 KFGESAPFLASVRAEQS---HSRDDGDAIAEASALVSCAYEDGTAWGRDVGWVYGTVTEDVATGFCMHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLRWAAGSLEIFFSRNNALLAGGRRRLHPLQRAAYLNTTVYPFTSLFLMAYCLFPAIPLIAGG 630          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.221e-32
Identity = 63/142 (44.37%), Postives = 96/142 (67.61%), Query Frame = 3
Query:  171 KRFGQSAVFVASTLM----ENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTT 584
            K+FG    F++S  +    E   +   A  E++L+E    ++C YED T+WG ++GW+Y   TED++TGF++H  GWRS+YC  +  AF+G+APINL++RL Q+LRW+ GS+E+ FS +CP+    G RL F++R AY+N T
Sbjct:  513 KKFGNLDSFISSIPIAANQERSIISPPALEESILQELSDAMACAYEDGTDWGKDVGWVYNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLL--AGRRLNFMQRIAYINMT 652          
The following BLAST results are available for this feature:
BLAST of EY679882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLD3_ARATH4.898e-3847.70Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLD6_ARATH2.808e-3751.27Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD1_ORYSJ4.063e-3748.47Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI4.063e-3748.47Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ARATH4.066e-3750.00Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD5_ORYSJ4.067e-3758.12Cellulose synthase-like protein D5 OS=Oryza sativa... [more]
CSLD5_ORYSI4.067e-3758.12Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLD3_ORYSJ8.978e-3744.09Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLF7_ORYSJ1.442e-3347.83Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]
CSLF8_ORYSJ1.221e-3244.37Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-A10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679882 ID=EY679882; Name=EY679882; organism=Citrus sinensis; type=EST; length=919bp
CCACGCGTCCGGAATTAAAATCGAGTAAAAAGGGCTCCGATAAGAAGAAA
TCCAGCAAGCATGTGGACCCTACTGTGCCCATATTTAGTCTTGAGGACAT
AGAGGAAGGAGTGGAAGGTGCTGGATTTGATGATGAAAAGTCACTACTTA
TGTCACAAATGAGCCTGGAGAAGCGATTTGGTCAATCAGCTGTTTTTGTT
GCTTCTACACTTATGGAGAATGGTGGTGTTCCACAGTCTGCAACACATGA
AACTCTTCTTAAGGAGGCCATTCATGTTATCAGTTGTGGTTACGAGGATA
AAACAGAATGGGGATCTGAGATAGGATGGATTTATGGTTCTGTTACGGAA
GATATTCTTACAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTA
CTGCATGCCTAAGCGCCCAGCCTTTAAAGGGTCTGCTCCTATTAATCTTT
CAGATCGTCTAAACCAAGTGCTTCGGTGGGCTCTAGGTTCTGTGGAAATT
CTTTTCAGTCGGCACTGTCCTATCTGGTATGGTTATGGTGGTCGATTGAA
ATTTCTTGAGAGGTTTGCTTATGTGAACACCACCTATCTATCCTCTCACT
GCAATTCCTCTTCTCATGTATTGGACGCTGCCGGCTGTCTGGTCTATTAA
CGAACAAAGTTCTTTATGCCTCAAATTAGTACCCTTGCCAGTATAGTGGT
TATTTTCCCTCTTTCTGCCCATCTCCCCCCTGGGAATTCGGGGAATGGAG
GGGGAGTGGGGTTTGGATCCAAAAAAGGGGGGGAAAAACCAAACAGTTTT
GGGGTTTTTGGGGGGGGTTTTCCCCCCCCTCCTATTTGGGGGTTTTTCCG
GGGGTCTTCCCCAAAGAATTTGGGGGGGGGTTTGGACAACCCAAATTTTC
CCTGGTCCCCCCCCCGAGG
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