EY679882

Overview
NameEY679882
Unique NameEY679882
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.777e-31
Identity = 79/180 (43.89%), Postives = 104/180 (57.78%), Query Frame = 3
Query:   75 VPIFSLEDI---EEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLME-------NGGVPQS--ATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFS-RHCPIWYGYGGRLKFLERFAYV 575
            VP+   ED    +E  E AG    + L   + +LE+ FGQS  F+AS   E       +GG P +  A   +LLKEAIHV+SC +E++T WG EIGW+YG     + TGF+MHARGW S YC P RPAF+  A  + +D L    R A+ ++ IL S RH P+W   G RL  L+R  YV
Sbjct:  449 VPLLDSEDDSDEQEEEEAAG--RRRRLRAYRAALERHFGQSPAFIASAFEEQGRRRGGDGGSPDATVAPARSLLKEAIHVVSCAFEERTRWGKEIGWMYGG---GVATGFRMHARGWSSAYCSPARPAFRRYARASPADVLAGASRRAVAAMGILLSRRHSPVW--AGRRLGLLQRLGYV 621          

HSP 2 Score: 26.9498 bits (58), Expect = 3.777e-31
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 1
Query:  589 YPLTAIPLLMYWTLPAVWSINEQSS 663
            YPL ++PL +Y  LPAV  +  +S+
Sbjct:  626 YPLASLPLTVYCALPAVCLLTGKST 650          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.085e-30
Identity = 67/159 (42.14%), Postives = 101/159 (63.52%), Query Frame = 3
Query:  129 DDEKSLLMSQMSLEKRFGQSAVFV-----ASTLMENGGVPQSATHE--TLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTT 584
            DD K+L         R+G S  F+     A++   +   P +A+ +    + E   V++C YED TEWG  +GW+Y   TED++TGF++H +GWRS+YC  +  AF+G+APINL++RL Q+LRW+ GS+E+ FSR+CP+  G   RL+ ++R AY N T
Sbjct:  489 DDAKAL-----GCPGRYGNSMPFINTIPAAASQERSIASPAAASLDETAAMAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAGC--RLRPMQRVAYANMT 640          

HSP 2 Score: 23.483 bits (49), Expect = 1.085e-30
Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  589 YPLTAIPLLMYWTLPAVW 642
            YP++A+ +++Y  LP +W
Sbjct:  642 YPVSALFMVVYDLLPVIW 659          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.879e-30
Identity = 69/147 (46.94%), Postives = 96/147 (65.31%), Query Frame = 3
Query:  168 EKRFGQSAVFVASTLMENGGVPQSA-----THETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGR-LKFLERFAYVN-TTY 587
            +K +G+S  F  +    +   P +A       E  + EA+ V +  YE KT WGS+IGW+YG+VTED++TG++MH +GWRS YC     AF G+APINL++RL QVLRW+ GS+EI FSR+ P+   +G   L  L+R AY+N TTY
Sbjct:  570 KKAYGKSDAFADTIPRASHPSPYAAEAAVAADEAAIAEAVMVTAAAYEKKTGWGSDIGWVYGTVTEDVVTGYRMHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIFFSRNNPL---FGSTFLHPLQRVAYINITTY 713          

HSP 2 Score: 23.8682 bits (50), Expect = 6.879e-30
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  589 YPLTAIPLLMYWTLPAV 639
            YP TA+ L+ Y T+PA+
Sbjct:  713 YPFTALFLIFYTTVPAL 729          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.635e-29
Identity = 62/148 (41.89%), Postives = 92/148 (62.16%), Query Frame = 3
Query:  159 MSLEKRFGQSAVFVASTL----MENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN-TTY 587
            M +  +FG S  FV + L     E    P +   E++  +   + +C YED T WG ++GW+Y   TED++TGF+MH +GWRS+Y   +  AF+G+APINL++RL Q+LRW+ GS+E+ FS    +    G RL  L+R AY+N +TY
Sbjct:  511 MDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALL--AGRRLHPLQRVAYLNMSTY 656          

HSP 2 Score: 24.2534 bits (51), Expect = 9.635e-29
Identity = 8/23 (34.78%), Postives = 13/23 (56.52%), Query Frame = 1
Query:  589 YPLTAIPLLMYWTLPAVWSINEQ 657
            YP+  + +  Y   P +W I+EQ
Sbjct:  656 YPIVTVFIFFYNLFPVMWLISEQ 678          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.640e-29
Identity = 62/148 (41.89%), Postives = 92/148 (62.16%), Query Frame = 3
Query:  159 MSLEKRFGQSAVFVASTL----MENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN-TTY 587
            M +  +FG S  FV + L     E    P +   E++  +   + +C YED T WG ++GW+Y   TED++TGF+MH +GWRS+Y   +  AF+G+APINL++RL Q+LRW+ GS+E+ FS    +    G RL  L+R AY+N +TY
Sbjct:  481 MDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALL--AGRRLHPLQRVAYLNMSTY 626          

HSP 2 Score: 24.2534 bits (51), Expect = 9.640e-29
Identity = 8/23 (34.78%), Postives = 13/23 (56.52%), Query Frame = 1
Query:  589 YPLTAIPLLMYWTLPAVWSINEQ 657
            YP+  + +  Y   P +W I+EQ
Sbjct:  626 YPIVTVFIFFYNLFPVMWLISEQ 648          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.528e-27
Identity = 62/148 (41.89%), Postives = 90/148 (60.81%), Query Frame = 3
Query:  159 MSLEKRFGQSAVFVASTL----MENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN-TTY 587
            M    +FG S+  V+S L     E    P  A   ++ ++   V +CGY+  T WG + GW+Y   TED+ TGF+MH +GWRS+Y   +  AF+G+APINL++RL Q+LRW+ GS+E+ FS    +    G RL  L+R AY+N +TY
Sbjct:  520 MDNANKFGASSTLVSSMLDGANQERSITPPVAIDGSVARDLAAVTACGYDLGTSWGRDAGWVYDIATEDVATGFRMHQQGWRSVYTSMEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALL--AGRRLHPLQRIAYLNMSTY 665          

HSP 2 Score: 24.2534 bits (51), Expect = 8.528e-27
Identity = 8/23 (34.78%), Postives = 13/23 (56.52%), Query Frame = 1
Query:  589 YPLTAIPLLMYWTLPAVWSINEQ 657
            YP+  + +  Y   P +W I+EQ
Sbjct:  665 YPIVTVFIFFYNLFPVMWLISEQ 687          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.449e-26
Identity = 56/140 (40.00%), Postives = 92/140 (65.71%), Query Frame = 3
Query:  174 RFGQSAVFVASTLM---ENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTT 584
            +FG S + + S L    ++     S  ++  + E   V+S  ++ +T+WG  +G+IY   TEDI+TGF++H +GWRS+YC  +  AF G+APINL++RL+Q++RW+ GS+E+ FS + P+    G RL+ L+R +Y+N T
Sbjct:  511 KFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLI--GGRRLQPLQRVSYLNMT 648          

HSP 2 Score: 25.7942 bits (55), Expect = 2.449e-26
Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  586 IYPLTAIPLLMYWTLPAVWSINEQ 657
            IYP+T++ +L+Y   P +W I ++
Sbjct:  649 IYPVTSLFILLYAISPVMWLIPDE 672          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.449e-26
Identity = 56/140 (40.00%), Postives = 92/140 (65.71%), Query Frame = 3
Query:  174 RFGQSAVFVASTLM---ENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTT 584
            +FG S + + S L    ++     S  ++  + E   V+S  ++ +T+WG  +G+IY   TEDI+TGF++H +GWRS+YC  +  AF G+APINL++RL+Q++RW+ GS+E+ FS + P+    G RL+ L+R +Y+N T
Sbjct:  511 KFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLI--GGRRLQPLQRVSYLNMT 648          

HSP 2 Score: 25.7942 bits (55), Expect = 2.449e-26
Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  586 IYPLTAIPLLMYWTLPAVWSINEQ 657
            IYP+T++ +L+Y   P +W I ++
Sbjct:  649 IYPVTSLFILLYAISPVMWLIPDE 672          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 9.697e-22
Identity = 60/169 (35.50%), Postives = 90/169 (53.25%), Query Frame = 3
Query:  162 SLEKRFGQSAVFVASTL--MENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTYLSSHCNSSSHVLDAAGCLVY*RTKF 662
            SL +RFG S   + S +  ++    PQ+    ++ + A  V  C YE +T WG+ IGW+Y SV ED+ T   +H+RGW S Y  P  PAF GS P  + + L Q  RWA G +EILF++  P+   +  +++F +R AY+             + L  A CL++  T F
Sbjct:  398 SLARRFGNSKEMMKSVVDAIQRNPNPQNILTNSI-EAAREVGHCQYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDTPAFLGSMPAGVPEALLQQRRWATGWIEILFNKQSPLRGLFSKKIRFRQRLAYLCIITCLRSIPELIYCLLPAYCLLHNSTLF 565          
BLAST of EY679882 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 1.266e-21
Identity = 61/161 (37.89%), Postives = 82/161 (50.93%), Query Frame = 3
Query:   93 EDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYV 575
            + I  G EGA        L  +    +   +SA ++ S  M    +   ++H  + KE   V SC YE  T WG E+GW YGS+TEDILTG ++HA GWRS     + PAF G AP      L Q  RWA G  EIL S++ P+       L+F +  AY+
Sbjct:  418 DSIVVGREGAAGSPSYKELQFKFESSEELKESARYIISGDMSGEPIVDISSHIEVAKE---VSSCNYESGTHWGLEVGWAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEILISQNNPLLLSIFKHLQFRQCLAYL 575          
The following BLAST results are available for this feature:
BLAST of EY679882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESAB_ORYSJ3.777e-3143.89Putative cellulose synthase A catalytic subunit 11... [more]
CSLF9_ORYSJ1.085e-3042.14Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]
CSLF6_ORYSJ6.879e-3046.94Probable mixed-linked glucan synthase 6 OS=Oryza s... [more]
CSLF2_ORYSJ9.635e-2941.89Mixed-linked glucan synthase 2 OS=Oryza sativa sub... [more]
CSLF1_ORYSJ9.640e-2941.89Putative mixed-linked glucan synthase 1 OS=Oryza s... [more]
CSLF4_ORYSJ8.528e-2741.89Mixed-linked glucan synthase 4 OS=Oryza sativa sub... [more]
CSLF3_ORYSJ2.449e-2640.00Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLF3_ORYSI2.449e-2640.00Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLB1_ARATH9.697e-2235.50Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLH3_ORYSJ1.266e-2137.89Putative cellulose synthase-like protein H3 OS=Ory... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-A10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679882 ID=EY679882; Name=EY679882; organism=Citrus sinensis; type=EST; length=919bp
CCACGCGTCCGGAATTAAAATCGAGTAAAAAGGGCTCCGATAAGAAGAAA
TCCAGCAAGCATGTGGACCCTACTGTGCCCATATTTAGTCTTGAGGACAT
AGAGGAAGGAGTGGAAGGTGCTGGATTTGATGATGAAAAGTCACTACTTA
TGTCACAAATGAGCCTGGAGAAGCGATTTGGTCAATCAGCTGTTTTTGTT
GCTTCTACACTTATGGAGAATGGTGGTGTTCCACAGTCTGCAACACATGA
AACTCTTCTTAAGGAGGCCATTCATGTTATCAGTTGTGGTTACGAGGATA
AAACAGAATGGGGATCTGAGATAGGATGGATTTATGGTTCTGTTACGGAA
GATATTCTTACAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTA
CTGCATGCCTAAGCGCCCAGCCTTTAAAGGGTCTGCTCCTATTAATCTTT
CAGATCGTCTAAACCAAGTGCTTCGGTGGGCTCTAGGTTCTGTGGAAATT
CTTTTCAGTCGGCACTGTCCTATCTGGTATGGTTATGGTGGTCGATTGAA
ATTTCTTGAGAGGTTTGCTTATGTGAACACCACCTATCTATCCTCTCACT
GCAATTCCTCTTCTCATGTATTGGACGCTGCCGGCTGTCTGGTCTATTAA
CGAACAAAGTTCTTTATGCCTCAAATTAGTACCCTTGCCAGTATAGTGGT
TATTTTCCCTCTTTCTGCCCATCTCCCCCCTGGGAATTCGGGGAATGGAG
GGGGAGTGGGGTTTGGATCCAAAAAAGGGGGGGAAAAACCAAACAGTTTT
GGGGTTTTTGGGGGGGGTTTTCCCCCCCCTCCTATTTGGGGGTTTTTCCG
GGGGTCTTCCCCAAAGAATTTGGGGGGGGGTTTGGACAACCCAAATTTTC
CCTGGTCCCCCCCCCGAGG
back to top