EY744782

Overview
NameEY744782
Unique NameEY744782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1000
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744782 vs. ExPASy Swiss-Prot
Match: ERGI1_XENLA (Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Xenopus laevis GN=ergic1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 9.048e-16
Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 1 
Query:  124 VVPTVYTDVSGHTIQSNQFSVTE--HFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 420
            +VPTVY D++G    S Q++V    +   S  GR+  +P ++F YDLSPI V +TE       F+T VCAI+GG FTV+GI+D+FI+    A  KKI++GK
Sbjct:  191 IVPTVYEDLNGKQQFSYQYTVANKAYVAYSHTGRV--VPAIWFRYDLSPITVKYTERRQPMYRFITTVCAIIGGTFTVAGILDSFIFTASEA-WKKIQLGK 288
[Close]
BLAST of EY744782 vs. ExPASy Swiss-Prot
Match: ERGI1_MOUSE (Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus GN=Ergic1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 9.048e-16
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1 
Query:  124 VVPTVYTDVSGHTIQSNQFSVT--EHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 420
            +VPTVY D SG    S Q++V   E+   S  GR+  +P ++F YDLSPI V +TE       F+T +CAI+GG FTV+GI+D+ I+    A  KKI++GK
Sbjct:  191 IVPTVYEDKSGKQRYSYQYTVANKEYVAYSHTGRI--IPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEA-WKKIQLGK 288
[Close]
BLAST of EY744782 vs. ExPASy Swiss-Prot
Match: ERGI1_HUMAN (Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Homo sapiens GN=ERGIC1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 9.048e-16
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1 
Query:  124 VVPTVYTDVSGHTIQSNQFSVT--EHFRSSEQGRLQTLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQRAIKKKIEIGK 420
            +VPTVY D SG    S Q++V   E+   S  GR+  +P ++F YDLSPI V +TE       F+T +CAI+GG FTV+GI+D+ I+    A  KKI++GK
Sbjct:  191 IVPTVYEDKSGKQRYSYQYTVANKEYVAYSHTGRI--IPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEA-WKKIQLGK 288
The following BLAST results are available for this feature:
BLAST of EY744782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
ERGI1_XENLA9.048e-1645.54Endoplasmic reticulum-Golgi intermediate compartme... [more]
ERGI1_MOUSE9.048e-1645.54Endoplasmic reticulum-Golgi intermediate compartme... [more]
ERGI1_HUMAN9.048e-1645.54Endoplasmic reticulum-Golgi intermediate compartme... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-E02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744782 ID=EY744782; Name=EY744782; organism=Citrus sinensis; type=EST; length=1000bp
CCACGCGTCCGCCACGATTTCCACTATAATTTTTACCGGTCAATTTAGAT
GGCTTTCGGCCTTGGTAATTGAGAAACACTCAGTTGAGTGAGGACTTTTT
ACTGTGTTTTACCTGTATTCTAGGTTGTACCTACAGTATACACCGATGTG
AGCGGGCACACTATCCAGTCAAATCAGTTCTCTGTAACTGAACATTTTAG
GAGTTCAGAACAAGGTCGACTTCAGACCCTTCCTGGAGTCTTCTTCTTTT
ATGACCTTTCTCCAATCAAGGTGACTTTCACAGAGGAACACGTTTCATTC
CTACACTTCCTAACTAACGTATGTGCAATTGTTGGAGGTGTTTTCACAGT
TTCGGGAATAATTGATGCATTTATATATCATGGTCAAAGGGCAATCAAGA
AGAAGATAGAAATTGGTAAATTTAGTTGAGAATTCATCTGTTTGGCCACC
GTAATTGCCGTATTTTGGTTAGTCCACCAGTGGGCTGGCCTGTGAGAAAA
TCAGTTGAAGAAAATGGGAACCATGAAATGGACTCTCCCAGTTGGTTTGA
TCGGCTCTTTTTAGTCATAACAAGTCTGTTTCATTACTGAATTACACTAA
TTTCTTAGTTCATTTCGATGTCAAAGCTGCCTCTGGGAATTTTAATCGGC
AATTGCATTGATGATTGGATTTGGTCGCGAACCCCAACCCCCAGGTTCCC
CAAACCCCCATCCGCGACCACCACCCCCCCCAACCGACCGGCCCGCCCCA
CCCAAAAGGAATCCAAGCTTAACCGGACCCGGGCAGGGCCACAGTCCTAC
CTCTTTTCATAAGTGTCCCCAAAATTTCCATTTCCCGGGGCCCGCGGTTT
TTAAAAGCGCCGGAGAAAGGGAGAAAAACCAGGGGGGATATACCCAAAAT
TTAATAACGCCTTTGAGAAACGCATTCCCCCCCTTTTTTCCCCACCATGG
GTGGATATAAAAAACAAAAAAAAAAGACACCCCCCCCCCCCCTATATCCC
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