EY679862

Overview
NameEY679862
Unique NameEY679862
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.591e-16
Identity = 43/121 (35.54%), Postives = 73/121 (60.33%), Query Frame = 2
Query:    2 VNGSLPLSRAIGDVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFHRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQ 364
            VNGSL +SRA+GD ++K        +Q+V+  P++  I   ++DEF+++ACDGIWD +S++EL ++V+ +L     L  +C  V   CL   +     DNM+++LV F    +N P  +++
Sbjct:  192 VNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCF----SNAPKVSDE 304          
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.591e-16
Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2
Query:    8 GSLPLSRAIGDVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFHRCLAPSAGGEGCDNMTMILVQFK 328
            G + +SR+IGD   K N  LP E Q++T NPDI T+++ DD EFLVIA +G+W  +++Q +VD   D+L    +  VICE++    L PS      DN T+ILV FK
Sbjct:  274 GRVSISRSIGDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGL-PSG-----DNTTVILVLFK 374          
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.691e-16
Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 2
Query:    2 VNGSLPLSRAIGDVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFHRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQ 364
            VNGSL +SRA+GD ++K        +Q+V+  P++  I   ++DEF+V+ACDGIWD +S++EL +FV  +L     L  +C  V   CL   +     DNM+++LV F     N P  +++
Sbjct:  192 VNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCFA----NAPKVSDE 304          
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.126e-16
Identity = 46/114 (40.35%), Postives = 69/114 (60.53%), Query Frame = 2
Query:    2 VNGSLPLSRAIGDVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL----TNETKLSVICEKVFHRCLAP-SAGGEGCDNMTMILVQFK 328
            VNG+L LSRA+GD+E+K +  L   +Q++ A PD+  +EL   D+FL++ CDG+++ L+  +L+  V   L      E  L    E +  + LAP ++ G GCDNMT ILV  K
Sbjct:  186 VNGNLNLSRALGDLEYKRDSKLRVNEQLIIAIPDVKKVELGPQDKFLLLGCDGVFETLNHMDLLKQVNSTLGQAQVTEELLRKAAEDLLDQLLAPDTSQGTGCDNMTTILVYLK 299          
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: PP2C1_PARTE (Protein phosphatase 2C 1 OS=Paramecium tetraurelia GN=GSPATT00029903001 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 8.001e-16
Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = 2
Query:    2 VNGSLPLSRAIGDVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL----TNETKLSVICEKVFHRCLAP-SAGGEGCDNMTMILVQFK 328
            VNG+L LSRA+GD+E+K +  L + +Q++ A PD+   EL   D+F+++ CDG+++ L+ QEL+  V   +      E  L    E +  + LAP ++ G GCDNMT ILV  +
Sbjct:  186 VNGNLNLSRALGDLEYKRDNKLRSNEQLIIALPDVKKTELTPQDKFILMGCDGVFETLNHQELLKQVNSTIGQAQVTEELLKKAAEDLLDQLLAPDTSQGTGCDNMTTILVYLR 299          
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: P2C18_ORYSJ (Probable protein phosphatase 2C 18 OS=Oryza sativa subsp. japonica GN=Os02g0599200 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.782e-15
Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 2
Query:   11 SLPLSRAIGDVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFHRCLAPSAGGEGCDNMTMILVQFK 328
            S+ +SR+IGD  FK N +L  E+Q++  +PDI T ++  D EFLVIA  G+W C+ S ++V ++  +L    +L VICE++    LA        +N T+ILVQFK
Sbjct:  336 SVTISRSIGDFAFKQNKDLNREEQMLICDPDIHTHDITGDMEFLVIASQGLWSCMESADVVAYIHVRLLEGVELRVICEELVQSGLASG------ENTTVILVQFK 435          
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.328e-15
Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 2
Query:    2 VNGSLPLSRAIGDVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFHRCLAPSAGGEGCDNMTMILVQF 325
            V GSL +SRA+GD  +K  P  P E Q+V+A P+++ +   D+DEF+++A DG+WD LS  +L   V  +L     L ++C ++   CL   +     DNMT ++V F
Sbjct:  216 VEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLGLDLELLCAQLLDTCLCKGS----LDNMTCMVVCF 319          
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: P2C17_ORYSJ (Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica GN=Os02g0599150 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14
Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 2
Query:   35 GDVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE-TKLSVICEKVFHRCLAPSAGGEGCDNMTMILVQFK 328
            GD  FK N +L  EKQ++  +PDI   ++ DD EFLVIA  G+W C+ S ++V ++ D+L+ E  +L VICE+V    LA        +N T+ILVQFK
Sbjct:  252 GDFAFKKNKDLDREKQMLVCDPDILADDITDDMEFLVIASQGLWSCVDSADVVSYIHDRLSVEGAELRVICEEVVEFGLASG------ENTTVILVQFK 344          
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.668e-13
Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 2
Query:    2 VNGSLPLSRAIGDVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFHRCLAPSAGGEGCDNMTMILVQF 325
            V GSL +SRA+GD  +K  P  P E Q+V+A P+++ +    +DEF+++A DG+WD +S   L   V  +L       ++C ++   CL   +     DNMT ILV F
Sbjct:  223 VEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRLGLAPELLCAQLLDTCLCKGS----LDNMTCILVCF 326          
BLAST of EY679862 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.854e-13
Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 2
Query:   38 DVEFKLNPNLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFHRCLAPSAGGEGCDNMTMILVQFK 328
            D   K N  LP E Q++T NPDI T+++ DD EFLVIA +G+W  +++Q +VD   D+L    +  VICE++    L PS      DN T+ILV FK
Sbjct:  428 DFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGL-PSG-----DNTTVILVLFK 518          
The following BLAST results are available for this feature:
BLAST of EY679862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PPM1B_HUMAN3.591e-1635.54Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
P2C20_ORYSJ3.591e-1644.86Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
PPM1B_RAT4.691e-1637.19Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
PP2C2_PARTE6.126e-1640.35Probable protein phosphatase 2C 2 OS=Paramecium te... [more]
PP2C1_PARTE8.001e-1639.47Protein phosphatase 2C 1 OS=Paramecium tetraurelia... [more]
P2C18_ORYSJ1.782e-1541.51Probable protein phosphatase 2C 18 OS=Oryza sativa... [more]
PPMBL_MOUSE2.328e-1537.96Probable protein phosphatase 1B-like OS=Mus muscul... [more]
P2C17_ORYSJ1.509e-1444.44Probable protein phosphatase 2C 17 OS=Oryza sativa... [more]
PPMBL_HUMAN1.668e-1337.04Probable protein phosphatase 1B-like OS=Homo sapie... [more]
P2C19_ORYSJ4.854e-1344.33Probable protein phosphatase 2C 19 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-G11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679862 ID=EY679862; Name=EY679862; organism=Citrus sinensis; type=EST; length=927bp
TGTTAATGGAAGTTTACCCCTTTCGAGAGCTATTGGAGATGTGGAGTTCA
AGCTAAACCCCAATTTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCT
GATATAAGTACTATTGAACTTTGTGATGACGATGAGTTTCTTGTCATAGC
TTGTGATGGGATTTGGGATTGCCTTTCAAGTCAAGAACTTGTCGATTTTG
TCAGGGATCAATTAACCAACGAAACAAAACTATCAGTCATTTGCGAGAAA
GTATTCCATCGGTGCTTGGCTCCATCAGCTGGTGGTGAAGGATGCGACAA
CATGACCATGATCTTGGTTCAGTTTAAAATTCTTTCTAATAATGGTCCTT
CTGCGGCTGAGCAGCCACCATCTGACCAACAATCCAAGTTAGCCCAGCAG
TTGCGGAGGGACTGAATCGAATTAGCTGTAACACTCTTTGCACTGACTAA
ATGGTACTCATTTTCTACTGTCTGAAAACACTGCTGAACTCCAGAACCAT
GGTCCCTGATTTTACATTCGGAAAACAATTCTCATGATTTGGTTGTAAAT
ATTTAAGCCTTTTCCTTTTAAGGGGATAGATAATCCTTAAGGGAATCCAG
GTAATGTGGGAACTTTTACTCCTGTCTTGTTTCACACATGACATTCCCTA
CCGATGAATACTTGTCTTTCATATTCCAAAAAAAAAAAAAGGGGGGGGCG
CTATACAAGATCCCAGCTTACCTCAGCCGGGCTAGGACAGCAGATACTTC
ATCATCTGCGCGCCGTTATACTACGTTTGCATGGCGCGGTTGCTTACATC
CCATCCTGGACTGGCGAAAACCCTGGGAGCTTGCCCACCGAAACATCACC
CATGGTGAACCATAGCCCGCTTTCGGACGCCGAGTAAGTGGGCCGAAAAA
AAGGGCGTACACAAAGAATTTTGATTC
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