EY744779

Overview
NameEY744779
Unique NameEY744779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.561e-19
Identity = 43/108 (39.81%), Postives = 74/108 (68.52%), Query Frame = 3
Query:  195 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +N+ A   ++ + ++SLGP G++KM+++ +  + VTND ATI++ L+V+HPA K+LV   + Q +E+GDG    +  A E+L+ A EL++  +HP+ II+GY  AI +
Sbjct:   25 QNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIRE 132          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 39/107 (36.45%), Postives = 71/107 (66.36%), Query Frame = 3
Query:  198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            NI A + ++   R++LGP GM+KM+++ +  + +TND  TI+ E+++ +P A+++V   + Q++E GDG    ++ AGE+L+ AE+L+   +HP+ II G+  A  K
Sbjct:   30 NIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEK 136          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +LKEG     G+ + V  NI AC+ ++   RT+LGP GM+K++++   K  ++ND ATI+  L+V HPAAK LV   K+Q  E+GDG       A E L+  +  +  GLHP  II  +  A
Sbjct:    8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +LKEG     G+ + V  NI AC+ ++   RT+LGP GM+K++++   K  ++ND ATI+  L+V HPAAK LV   K+Q  E+GDG       A E L+  +  +  GLHP  II  +  A
Sbjct:    8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +LKEG     G+ + V  NI AC+ ++   RT+LGP GM+K++++   K  ++ND ATI+  L+V HPAAK LV   K+Q  E+GDG       A E L+  +  +  GLHP  II  +  A
Sbjct:    8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +LKEG     G+ + V  NI AC+ ++   RT+LGP GM+K++++   K  ++ND ATI+  L+V HPAAK LV   K+Q  E+GDG       A E L+  +  +  GLHP  II  +  A
Sbjct:    8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 3
Query:  198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKT 521
            NI A + ++   RTSLGP GM+KM+I+  +++ ++ND ATI+  LE++HPAAK+L    KAQ  E GDG       AG +L    +L+  G+HPS I   +  A+NK+
Sbjct:   31 NIVAARAVADAIRTSLGPKGMDKMIISPNNEVLISNDGATILQNLELRHPAAKMLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKS 138          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 43/105 (40.95%), Postives = 70/105 (66.67%), Query Frame = 3
Query:  195 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +N+ A   ++ I ++SLGP G++KM+++ +  + +TND ATI+  LEV+HPAAK+L      Q +E+GDG    +  A E+L+ A+EL +  +HP+ +ISGY  A
Sbjct:   20 QNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLA 124          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.290e-18
Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +LKEG     GL + ++ NI+AC  +    RT+LGP GM+K++     ++ ++ND AT++  L++ HPAA+ LV   K+Q  E+GDG    +  AGE L+ A+  +  G+HP  II  +  A
Sbjct:   11 LLKEGTDTSQGLPQ-LISNINACCAIVDTVRTTLGPRGMDKLIYQSERQVTISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSA 131          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.290e-18
Identity = 47/126 (37.30%), Postives = 76/126 (60.32%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKT 521
            +L +  K  SG  +A L NI A K +S I  ++LGP  M KM+++ +  + +TND   I+ E++V HPAAK ++   + Q EE+GDG    I  AGE++  A+  I   +HPS I++ Y +A+ ++
Sbjct:   11 VLNQNTKRESG-KKAQLANISASKAVSEIVTSTLGPRSMLKMLLDPMGGIVMTNDGNAILREIDVNHPAAKSMIELARVQDEEVGDGTTSVIIMAGEMMSAAKPFIERDIHPSIIVTAYYRALEES 135          
The following BLAST results are available for this feature:
BLAST of EY744779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TCPA_SCHPO7.561e-1939.81T-complex protein 1 subunit alpha OS=Schizosacchar... [more]
THS2_HALVO9.875e-1936.45Thermosome subunit 2 OS=Halobacterium volcanii GN=... [more]
TCPH_PONAB9.875e-1940.16T-complex protein 1 subunit eta OS=Pongo abelii GN... [more]
TCPH_MOUSE9.875e-1940.16T-complex protein 1 subunit eta OS=Mus musculus GN... [more]
TCPH_HUMAN9.875e-1940.16T-complex protein 1 subunit eta OS=Homo sapiens GN... [more]
TCPH_BOVIN9.875e-1940.16T-complex protein 1 subunit eta OS=Bos taurus GN=C... [more]
TCPD_DICDI9.875e-1942.59T-complex protein 1 subunit delta OS=Dictyostelium... [more]
TCPA_MACFA9.875e-1940.95T-complex protein 1 subunit alpha OS=Macaca fascic... [more]
TCPH_DICDI1.290e-1837.70T-complex protein 1 subunit eta OS=Dictyostelium d... [more]
TCPG_TETPY1.290e-1837.30T-complex protein 1 subunit gamma OS=Tetrahymena p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-D11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744779 ID=EY744779; Name=EY744779; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCTAGGGATTTCGGGTTCATTTCTCCTCTCTCTGAATCAA
AACCTTGTAAAAGAGAAAAGAAAAAAGAAAAAATCAAGTGACGAAGAGAA
AAAAAAAATGGGATTTTCAATGCAACCGTATGGGATACAGTCAATGCTCA
AAGAAGGGCACAAGCACATGTCAGGTCTCGACGAAGCTGTGCTAAAAAAC
ATCGATGCTTGCAAACAGCTTTCTACTATCACTCGCACTTCTCTTGGACC
CAATGGTATGAATAAGATGGTTATCAATCATTTAGACAAACTTTTTGTCA
CAAATGATGCTGCGACTATTGTTAATGAACTTGAGGTTCAGCATCCTGCT
GCCAAGCTTTTGGTCTTAGCTGGAAAGGCTCAACAGGAAGAAATTGGTGA
TGGGGCCAATTTGACAATCTCGTTTGCTGGGGAAATTCTACAGGGTGCAG
AGGAGCTTATAAGGATGGGCCTACACCCTAGTGAGATCATCAGTGGATAC
ACTAAGGCGATCAATAAGACCCATTGAAATCTTAGAAGAACTGGTGGAGG
AAGGTTCTGAAAATATGGATGTTAGAAATACGGAGGAAGTTATTTATCGA
ATGAAGGCTGCTGTTGCTAACAAGCAATTTGGCCAAGAGGAAATTTTGTG
GCCCCTTTATGCTGAAGCATGCATCCAAGTTTGCCCCCAAAAACCCACCC
AACTTTTAACTTTGACAATGGTTCGGGTTGCAAAACTTTCGGGGAGGAGG
GTTGCCCAATTCCAACATTGGTCTCGGGAAAGGGTTTTAAAAAAAGAGAG
CTGGTGGAATATATCCAAAAAATAGGGAAAAGGGCACAAGTGTGGGGTGT
TTTGCCTGCGGGGGGGTGTTAAACCCTCCCGCCAAATTGGAAAAATTAAA
GGAACACT
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