EY744779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.561e-19 Identity = 43/108 (39.81%), Postives = 74/108 (68.52%), Query Frame = 3 Query: 195 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518 +N+ A ++ + ++SLGP G++KM+++ + + VTND ATI++ L+V+HPA K+LV + Q +E+GDG + A E+L+ A EL++ +HP+ II+GY AI + Sbjct: 25 QNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIRE 132
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 39/107 (36.45%), Postives = 71/107 (66.36%), Query Frame = 3 Query: 198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518 NI A + ++ R++LGP GM+KM+++ + + +TND TI+ E+++ +P A+++V + Q++E GDG ++ AGE+L+ AE+L+ +HP+ II G+ A K Sbjct: 30 NIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEK 136
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509 +LKEG G+ + V NI AC+ ++ RT+LGP GM+K++++ K ++ND ATI+ L+V HPAAK LV K+Q E+GDG A E L+ + + GLHP II + A Sbjct: 8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509 +LKEG G+ + V NI AC+ ++ RT+LGP GM+K++++ K ++ND ATI+ L+V HPAAK LV K+Q E+GDG A E L+ + + GLHP II + A Sbjct: 8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509 +LKEG G+ + V NI AC+ ++ RT+LGP GM+K++++ K ++ND ATI+ L+V HPAAK LV K+Q E+GDG A E L+ + + GLHP II + A Sbjct: 8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509 +LKEG G+ + V NI AC+ ++ RT+LGP GM+K++++ K ++ND ATI+ L+V HPAAK LV K+Q E+GDG A E L+ + + GLHP II + A Sbjct: 8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKT 521 NI A + ++ RTSLGP GM+KM+I+ +++ ++ND ATI+ LE++HPAAK+L KAQ E GDG AG +L +L+ G+HPS I + A+NK+ Sbjct: 31 NIVAARAVADAIRTSLGPKGMDKMIISPNNEVLISNDGATILQNLELRHPAAKMLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKS 138
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 43/105 (40.95%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 195 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509 +N+ A ++ I ++SLGP G++KM+++ + + +TND ATI+ LEV+HPAAK+L Q +E+GDG + A E+L+ A+EL + +HP+ +ISGY A Sbjct: 20 QNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLA 124
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.290e-18 Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509 +LKEG GL + ++ NI+AC + RT+LGP GM+K++ ++ ++ND AT++ L++ HPAA+ LV K+Q E+GDG + AGE L+ A+ + G+HP II + A Sbjct: 11 LLKEGTDTSQGLPQ-LISNINACCAIVDTVRTTLGPRGMDKLIYQSERQVTISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSA 131
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.290e-18 Identity = 47/126 (37.30%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKT 521 +L + K SG +A L NI A K +S I ++LGP M KM+++ + + +TND I+ E++V HPAAK ++ + Q EE+GDG I AGE++ A+ I +HPS I++ Y +A+ ++ Sbjct: 11 VLNQNTKRESG-KKAQLANISASKAVSEIVTSTLGPRSMLKMLLDPMGGIVMTNDGNAILREIDVNHPAAKSMIELARVQDEEVGDGTTSVIIMAGEMMSAAKPFIERDIHPSIIVTAYYRALEES 135 The following BLAST results are available for this feature:
BLAST of EY744779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744779 ID=EY744779; Name=EY744779; organism=Citrus sinensis; type=EST; length=908bpback to top |