EY679840

Overview
NameEY679840
Unique NameEY679840
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679840 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 2
Query:    5 ASVEACAHPFFDELREPNARLPHGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 172
            A+++   HPFFDELR+PNARLP+GR LPPLFNFK  EL G   E+V KL+P+H ++Q
Sbjct:  343 AALDTLVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGVPLEMVAKLVPEHARKQ 399          
BLAST of EY679840 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 2
Query:    8 SVEACAHPFFDELREPNARLPHGRPLPPLFNF-KQELSGASPELVNKLIPDH 160
            ++EACAHPFFD+LR PN  LP+GR LPPLFNF  QEL+GAS EL  +LIP H
Sbjct:  409 ALEACAHPFFDDLRAPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAH 460          
BLAST of EY679840 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 2
Query:    8 SVEACAHPFFDELREPNARLPHGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 172
            ++EA  H FFDELR+PN RLP+GR LPPLFNFK  EL G S E + KL+P+H ++Q
Sbjct:  348 ALEAVTHAFFDELRDPNTRLPNGRVLPPLFNFKAHELKGVSAENLLKLVPEHARKQ 403          
BLAST of EY679840 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.066e-12
Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 2
Query:    8 SVEACAHPFFDELREPNARLPHGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGL 181
            ++EA  HPF+D++R+PN RLP+GR LPPLFNFK  EL G   E++ KL+P H ++Q  L
Sbjct:  349 ALEALVHPFYDDVRDPNTRLPNGRFLPPLFNFKVNELKGVPAEMLVKLVPPHARKQCAL 407          
BLAST of EY679840 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.066e-12
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 2
Query:    8 SVEACAHPFFDELREPNARLPHGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQ 172
            +++   HPFFDELR+PNARLP GR LPPLFNFK  EL G   E + KL+P+H ++Q
Sbjct:  350 ALDCLTHPFFDELRDPNARLPTGRFLPPLFNFKPHELKGVPVETLMKLVPEHARKQ 405          
BLAST of EY679840 vs. ExPASy Swiss-Prot
Match: GSK3_DICDI (Glycogen synthase kinase-3 OS=Dictyostelium discoideum GN=gskA PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 2
Query:   11 VEACAHPFFDELREPNARLPHGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGL 181
            VE CAHPFFDELR+P   LP G+PLPPLFNF   E +   P+L   LIP H   Q+ L
Sbjct:  331 VEICAHPFFDELRDPKTCLPDGKPLPPLFNFTIAEQTSIGPKLAKTLIPSHAMNQIEL 388          
The following BLAST results are available for this feature:
BLAST of EY679840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
KSG1_ARATH1.651e-1361.40Shaggy-related protein kinase alpha OS=Arabidopsis... [more]
KSGT_BRANA3.678e-1369.23Shaggy-related protein kinase theta OS=Brassica na... [more]
MSK1_TOBAC1.825e-1260.71Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
MSK3_MEDSA4.066e-1254.24Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]
MSK1_MEDSA4.066e-1258.93Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
GSK3_DICDI2.018e-1156.90Glycogen synthase kinase-3 OS=Dictyostelium discoi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-E12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679840 ID=EY679840; Name=EY679840; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGTAGAAGCATGTGCACATCCCTTCTTTGATGAACTGCGTG
AGCCAAATGCTCGCCTACCACATGGCCGCCCACTGCCACCTCTCTTCAAC
TTTAAACAGGAATTATCGGGGGCTTCACCAGAGCTTGTTAATAAGTTGAT
ACCAGACCATGTGAAACGGCAATTAGGTCTGAATTTCTTGCATCCAGCCG
GGACATAGGTCTAGACAAGTAATATAGAAGTGAAATCTACTTGGTGATGT
GTAGCACAAAGGGAATTATATCCTTGTTCGTAACTGCCATGCATTGAGGC
TTAATCAGCATCAGTTGTTGCTCGATCAGCAAGCCTACATTCTCAGGCAG
CTATGCTTTTCTTGGTGCCTTCTTTTTCTGCTTTTCCATCCTCCTGTGTC
TCCTCCCCACTTCGTCCCACCCCCCCTCCTCTGTTAAAGTTCCCATTTGT
TTATGTACATGTTTGATAGTAAAGATAGGTTAAGTTGATAAGGTGGACTG
ATCAGACTGCTGTTAGTAGAGGAAAAACTGAGGAAAAATGTATTTGTACC
TAGGAAAAAAGCCCCAAAAAGAAATGGCCCAAAAGATGGGGTGGGCATGA
AGTTGTCAGGTTTTGGTCCTGTTTTTCTTTTCCCTCTTTGCAAGTCTTTC
AATTTCCCAATTTTGATGGTGAGGGGAGAACAGCTTTCGAATTCGAAAAC
AATTGTTTGTACTTTGGTTGTTTGGGACGAAGAAGTGGATATTGAAATTT
CCCCCTCTTGGAAAAGAAAGAAACAAAAAATACAACAACAAAAGAATAAA
AAAAGGGGCCGCCCACCCCAGAAGACTCCAACCCTAGACACGCCTCGCAA
GCGCCCCCAGCCCGCACACTTCGAACAGGGATCCCCAAAAATCCAAATAC
CGCGCGCACAGGTTTAAAAAA
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