EY679793

Overview
NameEY679793
Unique NameEY679793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 171
            H VA R NDPQ+ +F+ESEFL EQ EAINKI+KYV+QLR VGKGHG+WHFDQMLL E
Sbjct:  196 HGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKGHGVWHFDQMLLEE 252          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.772e-18
Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 168
            HSVA+RNND +M  F+E E+L EQVEAI KI++YV+QLR VGKGHG+WHFDQ LLH
Sbjct:  193 HSVAERNNDLEMTHFIEGEYLAEQVEAIKKISEYVAQLRRVGKGHGVWHFDQRLLH 248          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.954e-17
Identity = 41/57 (71.93%), Postives = 50/57 (87.72%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 171
            H+VA RNND Q+A+FVES++L EQVEAI  I++YV+QLR VGKGHG+WHFDQMLL E
Sbjct:  198 HAVATRNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKGHGVWHFDQMLLQE 254          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.954e-17
Identity = 40/56 (71.43%), Postives = 50/56 (89.29%), Query Frame = 1
Query:    4 SVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 171
            SV  +NND Q+ +FVESEFLGEQVEAI KI++YV+QLR +GKGHG+WHFDQMLL++
Sbjct:  196 SVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGHGVWHFDQMLLND 251          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.333e-17
Identity = 41/61 (67.21%), Postives = 53/61 (86.89%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 183
            H+VA R+ND  +A+F+ESEFL EQV+AI KI++YV+QLR VG+GHG+W FDQMLL+EG AA
Sbjct:  191 HAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQGHGVWQFDQMLLNEGAAA 251          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.686e-17
Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG-KGHGLWHFDQMLLHE 171
            H VA R NDPQ+ +F+ESEFL EQ EAINK++KYV+QLR VG KGHG+WHFDQMLL E
Sbjct:  193 HGVATRCNDPQLIDFIESEFLEEQGEAINKVSKYVAQLRRVGNKGHGVWHFDQMLLQE 250          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.685e-16
Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 165
            HSVA +NND  +A+F+ESEFL EQVEAI  I++YV+QLR VGKGHG WHF+QMLL
Sbjct:  203 HSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGHGTWHFNQMLL 257          
BLAST of EY679793 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.685e-16
Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 1
Query:    1 HSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 165
            HSVA +N+D Q+A+F+ES FL EQVEAI KI++YVSQLR +GKGHG WHFDQ LL
Sbjct:  201 HSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGHGTWHFDQELL 255          
The following BLAST results are available for this feature:
BLAST of EY679793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
FRI1_MAIZE1.353e-1875.44Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI1_PEA8.772e-1871.43Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI2_TOBAC1.954e-1771.93Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_ARATH1.954e-1771.43Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_TOBAC3.333e-1767.21Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_MAIZE5.686e-1772.41Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI4_ARATH3.685e-1670.91Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH3.685e-1670.91Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-A10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679793 ID=EY679793; Name=EY679793; organism=Citrus sinensis; type=EST; length=939bp
CACAGTGTGGCGGATAGAAACAATGATCCCCAAATGGCAGAGTTTGTCGA
GAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAGATCGCAAAAT
ATGTTTCTCAACTGAGGATGGTTGGGAAAGGCCACGGATTATGGCACTTC
GATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAAGAACCATATT
GTTACATTTCTTTGTGCTTTAGTCAACTCTTTTCTGCCAAATGTTCTGAA
GTATCTCTGCCACAGGAGGTTGAGTGTGTTGACAAAAAATAAGCTGAAAC
AGTGTTAAGTCCTACAAAGTTAATACTCAATAGCCTCCTTGCTTTATCAT
ATTAGTGTGGTCGCATTTAGATAGTCTTTTTGATGGTGCTTTTTCTTTAT
TTAGTAACAGACTGTGTGAAGGGATCTAATAGTTTAAGCAGAGCACCAAA
TCCATCTTCTGATTGTATAAATATAATTAAGTTGTTCAATAAAAGTTCTG
TTTCTGCCTAAAAAAAAAAAAAAACAAAAAAAAAAGACAAAAACACAGAA
GAAAAAAACAAACAAAAAAACAAAGGGGGGGGGCCGCCCTAAAAGAAACA
AACTAAAGTACCCGGGATTGCAAGTTCTAACTTTTTCTAAAGGGTACCCA
AATTCAATTCCCGGGCGCGTCTTTTTCCAACCTCCTGGACGGGGAAAAAC
CCGGGGGCTTCCCACACTTTAAGCCCCTTGGCGCCACTCCCCCTTTCCCA
ACCTGGGGAAAAAACGAAAAAGCCCCCCCCAGCACGCCCATCCCCAAGAT
GTTGGCGACCCACGAAGGGGCGAAGAGGGGAACCCCCCCCCGGTAACCCC
GCATTAAAGAACCGGCGGGGGGGGGGGGAGTATACGACCCCGGATGACAC
CACTACCAAAGTATCACGTGCCCGCTACCACCCCCCCTA
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