EY679780

Overview
NameEY679780
Unique NameEY679780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: RCBT2_MOUSE (RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.572e-20
Identity = 50/173 (28.90%), Postives = 97/173 (56.07%), Query Frame = 2
Query:   23 YGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA-LRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLGHRESSEPNF 538
            Y  LG G  N  L+P  ++T +L  ++++ VACG  H++ ++S G ++++G++  GQ+G G   +  +P ++   L+   +  I+ G   +MA+   G++Y WG+N  GQ+G+G + +  +P  V      +V +++CG+ HTL +T+    ++W     G LG    S  ++
Sbjct:  128 YSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY 299          

HSP 2 Score: 92.4337 bits (228), Expect = 4.279e-18
Identity = 49/158 (31.01%), Postives = 88/158 (55.70%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNKVVQISCGWRHTLAV-TERKNEFSWEKGR 496
            G +G G   ++ IP +V T  LQ + ++ +ACG   +++V  +G +Y +G++  GQLG G   +   PC++ AL+   + +++ G+ HT+ LT +G++Y WG N +GQ+G G+  +   P  V    D  +   +C   HT A  T+  + + W + R
Sbjct:  182 GQVGSGSTANQPIPRRV-TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCR 338          
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.870e-19
Identity = 49/146 (33.56%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   89 LQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG-DFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLGHRES 523
            LQ +K++ + CG  H++++S  G L+++G + +GQLG G  F     P  +E L    ++QIS G  H+MAL+  G +Y WG N+ GQ+G+G       P  ++   + KV  ++CG  H+  +T+    F++  G++G LGH  +
Sbjct:  135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNST 280          

HSP 2 Score: 83.1889 bits (204), Expect = 2.596e-15
Identity = 51/165 (30.91%), Postives = 86/165 (52.12%), Query Frame = 2
Query:   23 YGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNKVVQISCGWRHTLA-VTERKNEFSWEKGRNGHLGH 514
            +G LG+G +       ++    L    +  ++ G  H++++S SG +YS+G ++ GQLG G  +    P  +E L    +  ++ G  H+  LT DG L+ +G  K GQ+G     +   P  V   +  +V QI+CG  HTLA V++    FS+  G++G LG+
Sbjct:  167 HGQLGVGRKFPSTTTPQIVE-HLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330          

HSP 3 Score: 81.2629 bits (199), Expect = 9.865e-15
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSD-GKLYGWGWNKFGQVGVGDNVDHCSPVTVK 397
            G LGLG    +  P  +  +D Q  K+  VACG  H+  ++  G L+++G  K+GQLGH   ++ L PC +  L    ++QI+ G  HT+A  SD GK++ +G  K GQ+G G   D   P+ VK
Sbjct:  221 GQLGLGHTESKDDPSLIEGLDNQ--KVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343          
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: RCBT2_PONAB (RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.602e-19
Identity = 54/164 (32.93%), Postives = 88/164 (53.66%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA-LRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNK-VVQISCGWRHTLAVTERKNEFSWEKGRNGHLG 511
            G LGLGD    + P ++ +++ ++   +    G  H +  ++ G ++++G + Y QLG+G     LVPC +   L    + +++ G  H++ LTSDG+++ WG+N  GQVG G  V+   P  V   L NK VV I+CG    +AV +    + W    NG LG
Sbjct:   76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238          

HSP 2 Score: 93.9745 bits (232), Expect = 1.471e-18
Identity = 54/178 (30.34%), Postives = 95/178 (53.37%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNKVVQISCGWRHTLAV-TERKNEFSWEKGRN-----GHLGHRESSEPNFS 541
            G +G G   ++ IP +V T  LQ + +V +ACG    ++V  +G +Y +G++  GQLG G+  +   PC++ AL+   + +++ G+ HT+ LT +G++Y WG N +GQ+G G+  +   P  V    D  +   +C   HT A  T+  + + W + R       HL H   ++  F+
Sbjct:  182 GQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFA 358          
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: RCBT2_HUMAN (RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.602e-19
Identity = 54/164 (32.93%), Postives = 88/164 (53.66%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEA-LRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNK-VVQISCGWRHTLAVTERKNEFSWEKGRNGHLG 511
            G LGLGD    + P ++ +++ ++   +    G  H +  ++ G ++++G + Y QLG+G     LVPC +   L    + +++ G  H++ LTSDG+++ WG+N  GQVG G  V+   P  V   L NK VV I+CG    +AV +    + W    NG LG
Sbjct:   76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238          

HSP 2 Score: 93.9745 bits (232), Expect = 1.471e-18
Identity = 54/178 (30.34%), Postives = 95/178 (53.37%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNKVVQISCGWRHTLAV-TERKNEFSWEKGRN-----GHLGHRESSEPNFS 541
            G +G G   ++ IP +V T  LQ + +V +ACG    ++V  +G +Y +G++  GQLG G+  +   PC++ AL+   + +++ G+ HT+ LT +G++Y WG N +GQ+G G+  +   P  V    D  +   +C   HT A  T+  + + W + R       HL H   ++  F+
Sbjct:  182 GQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFA 358          
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: RCBT1_HUMAN (RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.126e-18
Identity = 56/178 (31.46%), Postives = 94/178 (52.81%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNKVVQISCGWRHTLAV-TERKNEFSWEKGRN-----GHLGHRESSEPNFS 541
            G +G G   ++  P KV    L  +++V +ACG   +++V  +G +Y +G++  GQLG G+  + L P ++ AL    ++QI  G+ HT+ALT +G LY WG N +GQ+G G+  +  SP  +    +  V   +C   HT A  T+  + + W + R       HL H   ++  F+
Sbjct:  158 GQVGSGSTANQPTPRKVTNC-LHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFA 334          

HSP 2 Score: 88.1965 bits (217), Expect = 8.070e-17
Identity = 53/166 (31.93%), Postives = 87/166 (52.41%), Query Frame = 2
Query:   23 YGN-LGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQL-EALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLD-NKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLG 511
            Y N LG GD    L+P+K+  +  ++ K +    G  H +  +  G +Y++G + Y QLG+G     + P Q+   L    + +++ G  H+MAL +DG+++ WG+N  GQVG G   +  +P  V   L   +VV I+CG   ++AV +    + W    NG LG
Sbjct:   50 YSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214          
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 7.299e-18
Identity = 58/176 (32.95%), Postives = 99/176 (56.25%), Query Frame = 2
Query:   17 GRYGNLGLGDRND-RLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG-DFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GDNVDHCS--PVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLGHRESSE 529
            G  G LG+G+  +    P+K+ T  L   K++ V+CG  H++++S   +++S+G + +GQLG G +F     P ++ +L    ++Q++ G  H+ AL+  G  +GWG N  GQ+ + G NV   S  P++V    +  VV ISCG  HT  +T+    F++   R+G LG+  + E
Sbjct:  102 GSEGQLGIGEFKEISFTPKKIMT--LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE 275          

HSP 2 Score: 82.8037 bits (203), Expect = 3.391e-15
Identity = 49/163 (30.06%), Postives = 83/163 (50.92%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKD-HLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNV-DHCSPVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHL 508
            G LG        +PE +    L+   + +V+CG  H+++V   GR++++G    GQLG G+FK+    P ++  L +  I Q+S G  H++AL+ D +++ WG N  GQ+G+G       SP  V+      + Q++ G  H+ A++     F W     G L
Sbjct:   53 GQLGRRGAQRGELPEPIQA--LETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL 213          

HSP 3 Score: 81.6481 bits (200), Expect = 7.553e-15
Identity = 42/138 (30.43%), Postives = 78/138 (56.52%), Query Frame = 2
Query:  101 KMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVD-HCSPVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLG 511
            +++  A G RH++ + ++ R+ S G +  GQLG    +   +P  ++AL    +  +S G  H++A+   G+++ WG    GQ+G+G+  +   +P  +    D K++Q+SCG  H+LA+++    FSW K  +G LG
Sbjct:   24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161          
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: RPGR_MOUSE (X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus GN=Rpgr PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.626e-17
Identity = 61/173 (35.26%), Postives = 90/173 (52.02%), Query Frame = 2
Query:    2 WMDREGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRES-FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSP--VTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLG 511
            +M     +G LGLG +   + P  +    L+ EK+ + ACG  HT+  + +G +Y+ G +  GQLG GD  D     Q+     +  I Q+S G   + ALT DGKL+ WG N  GQ+G+ D  + C P  VTV  P+      ISCG+ H+  VT     +++ +  NG LG
Sbjct:   57 YMFGSNNWGQLGLGSKAAIIKPTCIKA--LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPIS----WISCGYYHSAFVTMDGELYTFGEPENGKLG 223          

HSP 2 Score: 78.9518 bits (193), Expect = 4.896e-14
Identity = 52/165 (31.52%), Postives = 91/165 (55.15%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCS-PVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLG 511
            G +GL D+++  IP +V       + +  ++CG+ H+  V+  G LY++G  + G+LG  +    +H  P ++  + E  I Q++ G  HT+ LT +  +Y +G  +FGQ+G+G  +   S P  ++   D K+  ISCG  HT  +TE    +++  GR+G LG
Sbjct:  170 GQIGLEDKSNVCIPHEVTV----GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVI-QVACGGGHTVVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG 328          

HSP 3 Score: 74.3294 bits (181), Expect = 1.206e-12
Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 2
Query:  107 VMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKF--PLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLGHRESS 526
            + ++CG  HT  V+ + +LY +G + +GQLG G     + P  ++AL+   +   + G  HT+  T  G +Y  G N  GQ+G+GD  D  +   + F  P D  + Q+S G   + A+TE    F W     G +G  + S
Sbjct:   38 ICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADT-IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKS 178          
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: RCC2_DANRE (Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.054e-16
Identity = 51/149 (34.23%), Postives = 83/149 (55.70%), Query Frame = 2
Query:   86 DLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDH-CSPVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLGHRESSE 529
            D+Q   +V   C   H++ +++ G+L+S+G +  GQLGHGD K    P  +E L E  I   + G  HT+ALT +G +Y +G NK GQ+G G+  D   SP T+++     +V+++CG   ++ V  + N +S+     G LGH    +
Sbjct:  120 DVQVSCVVSGPCA-AHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN-GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGK 266          

HSP 2 Score: 78.1814 bits (191), Expect = 8.351e-14
Identity = 52/184 (28.26%), Postives = 84/184 (45.65%), Query Frame = 2
Query:   14 EGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHG------------DFKDHLVPCQLEALRES------------FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVK---FPLDNKVVQISCGWRHTLAVTERKNEFSW 484
            E + G LG G++ D ++    AT+    + +V VACG   ++ V   G LYS+G  +YGQLGH             +F   L+P ++    E                 ++ G  HT+ L S  +++ WG+  +G++G  +  D   P  VK   FP      QI CG++ + A++E    F W
Sbjct:  201 ENKLGQLGQGNQTDAVLSP--ATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFP-GRGATQIYCGYQCSFALSEMGGLFFW 381          
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: RPGR_HUMAN (X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens GN=RPGR PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 4.005e-16
Identity = 57/174 (32.76%), Postives = 88/174 (50.57%), Query Frame = 2
Query:    2 WMDREGRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKD----HLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLG 511
            +M     +G LGLG ++   I +      L+ EK+ + ACG  HT+  +  G +Y+ G +  GQLG GD ++    H++        E  I Q+S G   + ALT DG+L+ WG N  GQ+G+ +  + C P  V   +   V  ISCG+ H+  VT     + + +  NG LG
Sbjct:   57 YMFGSNNWGQLGLGSKS--AISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS---EHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223          

HSP 2 Score: 73.9442 bits (180), Expect = 1.575e-12
Identity = 43/141 (30.50%), Postives = 71/141 (50.35%), Query Frame = 2
Query:  107 VMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVD-HCSPVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLGHRESS 526
            V ++CG  H+  V+ + +LY +G + +GQLG G       P  ++AL+   +   + G  HT+  T  G +Y  G N  GQ+G+GD  + +   V   F  ++K+ Q+S G   + A+TE    F W     G +G +  S
Sbjct:   38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVS 178          

HSP 3 Score: 73.1738 bits (178), Expect = 2.687e-12
Identity = 48/165 (29.09%), Postives = 89/165 (53.94%), Query Frame = 2
Query:   26 GNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGD--FKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCS-PVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLG 511
            G +GL + ++  +P++V       + +  ++CG+ H+  V++ G LY +G  + G+LG  +    +H  P  +  + E  I Q++ G  HT+ LT +  +Y +G  +FGQ+G+G  +   S P  ++   D  +  ISCG  HT  +T+    +++  GR+G LG
Sbjct:  170 GQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLG 328          
BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: RCCD1_HUMAN (RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.005e-16
Identity = 46/173 (26.59%), Postives = 81/173 (46.82%), Query Frame = 2
Query:  122 GWRHTISVSSSGRLYSYGWSKYGQLGHGDFKDHLVPCQLEALRESFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV----------------------GDNVDHCS----------------PVTVKFPLDNKVVQISCGWRHTLAVTERKNEFSWEKGRNGHLGHRESS 526
            G  H + + ++G+++S+G  ++GQLGHG  +  L P  LEAL+   +++++ G  H++ ++  G +Y WGWN+ GQ+ +                      G  V                    P  +  P+ +  V+ SCG RHT  VT     ++W  G+ G LGH +++
Sbjct:  166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTT 338          
The following BLAST results are available for this feature:
BLAST of EY679780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
RCBT2_MOUSE4.572e-2028.90RCC1 and BTB domain-containing protein 2 OS=Mus mu... [more]
HERC5_HUMAN3.870e-1933.56Probable E3 ubiquitin-protein ligase HERC5 OS=Homo... [more]
RCBT2_PONAB6.602e-1932.93RCC1 and BTB domain-containing protein 2 OS=Pongo ... [more]
RCBT2_HUMAN6.602e-1932.93RCC1 and BTB domain-containing protein 2 OS=Homo s... [more]
RCBT1_HUMAN1.126e-1831.46RCC1 and BTB domain-containing protein 1 OS=Homo s... [more]
HERC6_HUMAN7.299e-1832.95Probable E3 ubiquitin-protein ligase HERC6 OS=Homo... [more]
RPGR_MOUSE1.626e-1735.26X-linked retinitis pigmentosa GTPase regulator OS=... [more]
RCC2_DANRE1.054e-1634.23Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 S... [more]
RPGR_HUMAN4.005e-1632.76X-linked retinitis pigmentosa GTPase regulator OS=... [more]
RCCD1_HUMAN4.005e-1626.59RCC1 domain-containing protein 1 OS=Homo sapiens G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679780 ID=EY679780; Name=EY679780; organism=Citrus sinensis; type=EST; length=993bp
CTGGATGGATCGAGAGGGCCGTTATGGAAATTTGGGTTTAGGTGATAGAA
ATGATCGCTTAATCCCTGAGAAAGTTGCTACAGTCGATTTGCAGAGAGAA
AAGATGGTTATGGTTGCTTGTGGATGGAGACACACCATATCTGTTTCCTC
TTCTGGTAGGTTGTACAGTTATGGATGGAGCAAATATGGTCAACTAGGCC
ATGGGGATTTTAAGGATCATCTTGTTCCTTGTCAGCTGGAAGCTTTGCGT
GAAAGTTTTATTTCTCAGATCTCGGGTGGTTGGAGACACACTATGGCACT
CACATCTGATGGAAAACTTTATGGCTGGGGATGGAATAAGTTTGGACAGG
TTGGAGTTGGTGACAATGTTGATCATTGCTCTCCGGTGACAGTCAAATTT
CCTCTTGACAACAAAGTAGTCCAGATTTCATGTGGTTGGAGACATACTCT
TGCTGTCACCGAAAGGAAAAATGAATTTTCTTGGGAAAAAGGACGAAATG
GTCACCTTGGGCACAGGGAATCTTCTGAACCGAATTTCTCAAAAAATATA
AAAGACCTTTAAGTCCTGGAATAAATCGCAACGACAACATAATAGAGTAC
CCAAATCATGACACCCCCACCAAGAAAAGCAGGGAACACAACCCAGTCAA
AAAAATCGAGTAGTCCATGAATAATATGGCCCGTGGCCAAACAACATATA
AAAGCAAGGGGAGAAACAGTAAAACCGGGACCAGAAGAAAGACGAGAAGC
ATGAAAGACGAAACAAGATTAGAAAGTACAAGCCACGCAGAAGGAAAACA
AGAAAACAAAATGGACGAAAACAAGTGAAACAACAAAAGAGAGACATCAA
AAAAACACGAACGTAACACAAGACAAAACACGAGAACTGATTCACCGCAA
ACAAAACACAAACTAAAACTAGACTAAACCACAAACAACAATAACAAAAT
CCACCGCGTCAACAACACACAAACATTTCAAAACAAAGAGCAC
back to top