EY679780

Overview
NameEY679780
Unique NameEY679780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679780 vs. ExPASy Swiss-Prot
Match: SPKUL_DICDI (Bifunctional serine/threonine-protein kinase/NEDD4-like E3 ubiquitin-protein ligase OS=Dictyostelium discoideum GN=DDB_G0276527 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 6.617e-11
Identity = 47/182 (25.82%), Postives = 93/182 (51.10%), Query Frame = 2 
Query:   17 GRYGNLGLGDRNDRLIPEKVATVDLQREKMVMVACGWRHTISVSSSGRLYSYGWSKYGQLGHGDFKD-HLVPCQLEALRES--------FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNV--DHCSPVTV---KFPLDN-KVVQISCGWRHTLAVTERKNEFSWEKGRNGHLGHR 517
            G +G LGLG+++  +         LQ   ++ ++ G  H++ +++ G ++S+G +  GQLG G F +   +P Q++  + S         I ++S G  H++A++ +   Y WG + +G +G   +V  D   PV +      +DN K + +S G++H +A++   + +SW       LG +
Sbjct:  365 GDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFK 546
The following BLAST results are available for this feature:
BLAST of EY679780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
SPKUL_DICDI6.617e-1125.82Bifunctional serine/threonine-protein kinase/NEDD4... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679780 ID=EY679780; Name=EY679780; organism=Citrus sinensis; type=EST; length=993bp
CTGGATGGATCGAGAGGGCCGTTATGGAAATTTGGGTTTAGGTGATAGAA
ATGATCGCTTAATCCCTGAGAAAGTTGCTACAGTCGATTTGCAGAGAGAA
AAGATGGTTATGGTTGCTTGTGGATGGAGACACACCATATCTGTTTCCTC
TTCTGGTAGGTTGTACAGTTATGGATGGAGCAAATATGGTCAACTAGGCC
ATGGGGATTTTAAGGATCATCTTGTTCCTTGTCAGCTGGAAGCTTTGCGT
GAAAGTTTTATTTCTCAGATCTCGGGTGGTTGGAGACACACTATGGCACT
CACATCTGATGGAAAACTTTATGGCTGGGGATGGAATAAGTTTGGACAGG
TTGGAGTTGGTGACAATGTTGATCATTGCTCTCCGGTGACAGTCAAATTT
CCTCTTGACAACAAAGTAGTCCAGATTTCATGTGGTTGGAGACATACTCT
TGCTGTCACCGAAAGGAAAAATGAATTTTCTTGGGAAAAAGGACGAAATG
GTCACCTTGGGCACAGGGAATCTTCTGAACCGAATTTCTCAAAAAATATA
AAAGACCTTTAAGTCCTGGAATAAATCGCAACGACAACATAATAGAGTAC
CCAAATCATGACACCCCCACCAAGAAAAGCAGGGAACACAACCCAGTCAA
AAAAATCGAGTAGTCCATGAATAATATGGCCCGTGGCCAAACAACATATA
AAAGCAAGGGGAGAAACAGTAAAACCGGGACCAGAAGAAAGACGAGAAGC
ATGAAAGACGAAACAAGATTAGAAAGTACAAGCCACGCAGAAGGAAAACA
AGAAAACAAAATGGACGAAAACAAGTGAAACAACAAAAGAGAGACATCAA
AAAAACACGAACGTAACACAAGACAAAACACGAGAACTGATTCACCGCAA
ACAAAACACAAACTAAAACTAGACTAAACCACAAACAACAATAACAAAAT
CCACCGCGTCAACAACACACAAACATTTCAAAACAAAGAGCAC
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