EY679774

Overview
NameEY679774
Unique NameEY679774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.407e-90
Identity = 172/237 (72.57%), Postives = 191/237 (80.59%), Query Frame = 2
Query:   65 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA STMALSSS F GKAV L+PS +E++  G+++MRKT SK+  VSS SPWYGP+RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFS+GGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + G PLGEV DP      +FDPLG   ++      LKVKE KN +    S   FF  AI
Sbjct:    1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGEPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 234          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.837e-90
Identity = 173/237 (73.00%), Postives = 190/237 (80.17%), Query Frame = 2
Query:   65 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA +TMALSS SF GKAV  +PS +E++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG    +      LKVKE KN +    S   FF  AI
Sbjct:    1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVVDPLYPG-GSFDPLGLA-DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 234          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 5.345e-90
Identity = 170/237 (71.73%), Postives = 189/237 (79.75%), Query Frame = 2
Query:   65 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA +TMALSSS F GK V L+PS +E++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW KAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMG +EG + + GGPLG V DP      +FDPLG   ++      LKVKE KN +    S   FF  AI
Sbjct:    1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYR-VAGGPLGVVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKETKNGRLAMFSMFGFFIQAI 234          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 1.191e-89
Identity = 172/237 (72.57%), Postives = 191/237 (80.59%), Query Frame = 2
Query:   65 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA +TMA+SSS F GKAVN+ PS ++++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG    +      LKVKE KN +    S   FF  AI
Sbjct:    1 MAAATMAISSSSFAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVIDPLYPG-GSFDPLGLA-DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 233          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.555e-89
Identity = 170/237 (71.73%), Postives = 189/237 (79.75%), Query Frame = 2
Query:   65 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA +TMALSSS F GKAV L+ S +E++  G+++MRKT +K+   SS SPWYGPDRVKYLGPFSGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG   ++      LKVKE KN +    S   FF  AI
Sbjct:    1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVIDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 234          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 7.718e-89
Identity = 167/235 (71.06%), Postives = 184/235 (78.30%), Query Frame = 2
Query:   65 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA STMALSS +F GKAV L+P  +E+   GR++MRKT   +  SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMG +EG +    GPLGE  D  +    +FDPLG    +      LKVKE KN +    S   FF  AI
Sbjct:    1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAED-LLYPGGSFDPLGLA-TDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 233          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 1.008e-88
Identity = 163/224 (72.77%), Postives = 180/224 (80.36%), Query Frame = 2
Query:   95 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            +  G+AV L+P+  E+    + +MRKT SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP +    +FDPLG    +      LKVKE KN +    S   FF  AI
Sbjct:    2 TLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVTDP-IYPGGSFDPLGLA-DDPEAFAELKVKELKNGRLAMFSMFGFFVQAI 222          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.719e-88
Identity = 171/235 (72.77%), Postives = 185/235 (78.72%), Query Frame = 2
Query:   65 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA STMALSS +  GKAV +APS +EL   GR+SMRKT    VS  SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSIL+IWA QV+LMG +EG + + GGPLGE+ DP      +FDPLG      R    LKVKE KN +    S   FF  AI
Sbjct:    1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYR-VAGGPLGEIVDPLYPG-GSFDPLGLAEDPER-SAELKVKELKNGRLAMFSMFGFFVQAI 231          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 3.830e-88
Identity = 169/237 (71.31%), Postives = 189/237 (79.75%), Query Frame = 2
Query:   65 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA +TMALSSS F GKAVN+ PS +E++  G+++MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNGVKFGEAVWFKAG+QIF EGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP      +FDPLG    +      L+VKE KN +    S   FF  AI
Sbjct:    1 MAAATMALSSSSFAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-VAGGPLGEVIDPLYPG-GSFDPLGLA-DDPEAFAELEVKEIKNGRLAMFSMFGFFVQAI 233          
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 4.235e-87
Identity = 172/238 (72.27%), Postives = 187/238 (78.57%), Query Frame = 2
Query:   65 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766
            MA+STMALSS+ F GKAVN+  S   L    R++MRKT +K+    SSGSPWYGPDRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMG +EG + + GGPLGEV DP      TFDPLG    +     ++KVKE KN +    S   FF  AI
Sbjct:    1 MASSTMALSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYR-VAGGPLGEVVDPLYPG-GTFDPLGLA-DDPEAFADVKVKELKNGRLAMFSMFGFFVQAI 232          
The following BLAST results are available for this feature:
BLAST of EY679774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
CB23_NICPL1.407e-9072.57Chlorophyll a-b binding protein C, chloroplastic O... [more]
CB25_PETSP1.837e-9073.00Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB22_PETSP5.345e-9071.73Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB24_PETSP1.191e-8972.57Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB23_PETSP1.555e-8971.73Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB21_SINAL7.718e-8971.06Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB21_CUCSA1.008e-8872.77Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB23_APIGR1.719e-8872.77Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_PETSP3.830e-8871.31Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB29_MAIZE4.235e-8772.27Chlorophyll a-b binding protein M9, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-H03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679774 ID=EY679774; Name=EY679774; organism=Citrus sinensis; type=EST; length=978bp
CCACGCGTCCGCCCACGCGTCCGCTCGAACACTAGAGCTCACCAACAACT
CCGATCATTGTAAAATGGCAACCTCGACCATGGCTCTCTCCTCATCATTC
GTCGGCAAGGCTGTGAACCTTGCCCCTTCAGGCAATGAGCTGAGCAATGG
TGGCCGCATCTCCATGCGTAAAACCGGGAGCAAGTCTGTTTCTTCAGGTA
GCCCGTGGTACGGCCCGGACAGAGTCAAGTACTTGGGTCCATTCTCTGGC
GAGCCCCCAAGCTACTTGACTGGTGAGTTCCCTGGTGACTACGGTTGGGA
CACTGCTGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAAC
TCGAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCTCTTGGATGCGTC
TTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGCCGTGTG
GTTCAAGGCGGGGGCCCAGATCTTCAGCGAGGGCGGGCTTGACTACTTGG
GGAACCCAAGCCTGATCCACGCTCAAAGCATCTTGGCCATCTGGGCTTTG
CAGGTGGTCTTGATGGGAACCCTTGAGGGGTTACAGAATTTGCTGGGAGG
GCCCCTCGGTGAAGTGAACGACCCTTTTGTAACCCAGGTGGACACTTTTG
ATCCATTGGGGTTTGGGCGGAAGAACGGAAGGCTTTTACCTAACTTAAAG
GTTAAGGAAAACAAAAATGCAAAGTTTGGCTATATCTCCAATGTTTGGTT
TTTCAATTCAGCCATTAACCACAAGAAAGGGAACGGATAAAAAAACTGAC
CAAACCCTTTGTTAAATCCTTTACATAATTATAGCAACGGGGAAACATAC
AAATACTTATATCCCTGTGAAAATAGACTAATCGTTAAAAAAGAAAATTT
CTCACTCTTACGTGTTCTACGGTAAAAAAACATAAATCCCTAAAATTTAA
ACACCCTGAGCGAAGAAATTTTCAAATT
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