EY679774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.159e-68 Identity = 132/176 (75.00%), Postives = 142/176 (80.68%), Query Frame = 2 Query: 239 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP + +FDPLG + LKVKE KN + S FF AI Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVTDP-IYPGGSFDPLGLA-DDPEAFAELKVKELKNGRLAMFSMFGFFVQAI 173
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 5.570e-63 Identity = 135/222 (60.81%), Postives = 151/222 (68.02%), Query Frame = 2 Query: 101 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 + K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIW +V+LMG +EG + + GPLGEV DP +FD LG ++ LKVKE KN + S FF AI Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTC--DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYR-IARGPLGEVTDPLYP--GSFDSLGLA-EDTEAFAELKVKELKNGRLAMFSMFGFFVQAI 235
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.621e-62 Identity = 127/204 (62.25%), Postives = 151/204 (74.02%), Query Frame = 2 Query: 167 RKTGSKSV---SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 +KT +K+ SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A+QV+LMG +EG + + GGP GE DP ++FDPLG + LKVKE KN + S FF AI Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYR-VNGGPAGEGLDPLYPG-ESFDPLGLA-DDPDTFAELKVKEIKNGRLASFSMFGFFVQAI 220
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.340e-61 Identity = 125/193 (64.77%), Postives = 143/193 (74.09%), Query Frame = 2 Query: 191 SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 S+G WYGPDR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAGAQIFSEGGLDYLG+P+LIHAQ+I+A A+QVVLMG +EG + + GGP GE DP ++FDPLG + LKVKE KN + S FF AI Sbjct: 34 SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR-VNGGPAGEGLDPLYPG-ESFDPLGLA-DDPDTFAELKVKEIKNGRLAMFSCFGFFVQAI 223
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 3.056e-61 Identity = 135/238 (56.72%), Postives = 161/238 (67.65%), Query Frame = 2 Query: 65 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQ-NLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 MA++ MA +S + V K L+ G S + + ++ G+ WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG +EG + N L G +GE ND + FDPLG + LKVKE KN + S FF AI Sbjct: 1 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDG-VGEGNDLY-PGGQYFDPLGLA-DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAI 235
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 6.808e-61 Identity = 130/235 (55.32%), Postives = 158/235 (67.23%), Query Frame = 2 Query: 68 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQ-NLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 +++T+ ++ F+G+ N P + ++ G ++ S WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAG+QIFS+GGLDYLGNP+L+HAQSILA+ QVVLMG +EG + N L G +GE ND + FDPLG + LKVKE KN + S FF AI Sbjct: 9 SSTTVVKATPFLGQTKNANPLRDVVAMGS--------ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPG-VGEGNDLY-PGGQYFDPLGLA-DDPTTFAELKVKEIKNGRLAMFSMFGFFVQAI 232
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 8.913e-53 Identity = 115/195 (58.97%), Postives = 138/195 (70.77%), Query Frame = 2 Query: 206 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDT------FDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YLGN SLIHAQSI+A A+QVVLMG E + GG G F+ +DT FDPLG + LKVKE KN + S + FF AI Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR-ANGGSEG-----FLDDLDTLYPGGPFDPLGLA-DDPDTFAELKVKEIKNGRLAMFSCLGFFVQAI 220
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 1.020e-48 Identity = 112/201 (55.72%), Postives = 135/201 (67.16%), Query Frame = 2 Query: 170 KTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 K SKS SS + +YGPD + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAGA IF +GGL+YLGNPSLIHAQ+I+A A+QVVLMG +EG + + GGP GE DP + FDPLG + LKVKE KN + + + FF AI Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYR-VNGGPAGEGLDPLYPG-EAFDPLGLA-DDPDTFAELKVKEIKNGRLAMFACLGFFVQAI 241
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.084e-32 Identity = 78/120 (65.00%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 407 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 ELL +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG +EG + + GGPLGE DP D FDPLG + LKVKE KN + S FF AI Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYR-VGGGPLGEGLDPLYPG-DAFDPLGLA-DDPEAKAELKVKEIKNGRLAMFSMFGFFVQAI 117
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.069e-25 Identity = 85/205 (41.46%), Postives = 105/205 (51.22%), Query Frame = 2 Query: 179 SKSVSSGSP----WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGR--KNGRLLPNLKVKENKNAKFGYISNVWFFNSA 763 SK+VS S WYGPDR +L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I +LA+ A +VVL+G E + G + P FDPLG + + G L LKVKE KN + + + FF A Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLGGAEYYRITNGLDFEDKLHP----GGPFDPLGLAKDPEQGAL---LKVKEIKNGRLAMFAMLGFFIQA 243 The following BLAST results are available for this feature:
BLAST of EY679774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679774 ID=EY679774; Name=EY679774; organism=Citrus sinensis; type=EST; length=978bpback to top |