EY679774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.200e-18 Identity = 66/195 (33.85%), Postives = 98/195 (50.26%), Query Frame = 2 Query: 215 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVN-DPF-----VTQVDT-------FDPLGFGRKNGRLLPNLKVKENKNAKFGYIS--NVWF 751 PDR + F G PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + G+ W+ AG Q +Y + + ++ +++VL+G EG + G VN DP +T D FDPLG+G + + L+ KE KN + ++ WF Sbjct: 63 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQ-------EYFTDTT--------TLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWF 238
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.179e-18 Identity = 69/208 (33.17%), Postives = 101/208 (48.56%), Query Frame = 2 Query: 176 GSKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVN-DPF-----VTQVDT-------FDPLGFGRKNGRLLPNLKVKENKNAKFGYIS--NVWF 751 GS+SV+ + PDR + F G PP +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Q +Y + + ++ +++VL+G EG + G VN DP +T D FDPLG+G + + L+ KE KN + ++ WF Sbjct: 50 GSRSVAVSAVAADPDRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQ-------EYFTDTT--------TLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWF 238
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.074e-17 Identity = 74/231 (32.03%), Postives = 105/231 (45.45%), Query Frame = 2 Query: 65 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGA-QIFSEGGLDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWF 751 MA+S+ S S VG LAPS +G T S V+ + W F G+P P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML G + PE L G W KA +G YLGNP + ++ I A++ + + E + + P + FDPLGF K+ LK+KE KN + ++ V F Sbjct: 1 MASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEW-----------FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL-------GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTMEKDP-----EKKKYPGGAFDPLGFS-KDPAKFEELKLKEIKNGRLAMLAFVGF 205
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.324e-15 Identity = 48/93 (51.61%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 488 LDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 LDYLGNPSL+HAQSILAIWA QV+LMG +EG + GPLGE D + +FDPL + LKVKE KN + S FF AI Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAED-LLYPGGSFDPLA-SLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 91
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.781e-14 Identity = 57/170 (33.53%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 248 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWF 751 G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L G W KA GG YLG P + ++ I A++ + + +E ++ + + ++ FDPLG+ K+ LKVKE KN + ++ V F Sbjct: 52 GQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL-------GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQRS-----MEKDSEKKKYPGGAFDPLGYS-KDPAKFEELKVKEIKNGRLALLAIVGF 206
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.099e-13 Identity = 46/86 (53.49%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 509 SLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 SL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP +FDPLG ++ LKVKE KN + S FF AI Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 234
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.099e-13 Identity = 46/86 (53.49%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 509 SLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 SL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP +FDPLG ++ LKVKE KN + S FF AI Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 234
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.099e-13 Identity = 46/86 (53.49%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 509 SLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 SL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP +FDPLG ++ LKVKE KN + S FF AI Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 83
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.099e-13 Identity = 46/86 (53.49%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 509 SLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 SL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP +FDPLG ++ LKVKE KN + S FF AI Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 232
BLAST of EY679774 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.099e-13 Identity = 46/86 (53.49%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 509 SLIHAQSILAIWALQVVLMGTLEGLQNLLGGPLGEVNDPFVTQVDTFDPLGFGRKNGRLLPNLKVKENKNAKFGYISNVWFFNSAI 766 SL+HAQSILAIWA QVVLMG +EG + + GGPLGEV DP +FDPLG ++ LKVKE KN + S FF AI Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYR-IAGGPLGEVVDPLYPG-GSFDPLGLA-EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 232 The following BLAST results are available for this feature:
BLAST of EY679774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679774 ID=EY679774; Name=EY679774; organism=Citrus sinensis; type=EST; length=978bpback to top |