EY744756

Overview
NameEY744756
Unique NameEY744756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.999e-100
Identity = 180/228 (78.95%), Postives = 197/228 (86.40%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIER---THLN 703
            MRE ISIHIGQAGIQVGNACWELYCLEHGI+ DG M SD +VG   DAFNTFFSETG+GKHVPRA+F+DLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVF+AV                 VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLL+HTDV+VLL+NE IY+IC  SL+IER   T+LN
Sbjct:    1 MREIISIHIGQAGIQVGNACWELYCLEHGIEHDGTMPSDSSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLN 228          
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBA_TRYCR (Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 6.682e-100
Identity = 178/228 (78.07%), Postives = 195/228 (85.53%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIER---THLN 703
            MRE I IHIGQAG QVGNACWEL+CLEHGIQPDG M SDKT+G  DDAFNTFFSETGAGKHVPRAVFLDLEPTV+DE+RTG YRQLFHPEQLISGKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLV+HAV                 VDYGKKSKLG+TVYPSPQVST+VVEPYNSVLSTHSLL+HTDV+ +L+NE IY++   +L+IER   T+LN
Sbjct:    1 MREAICIHIGQAGCQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEIRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAAMLDNEAIYDLTRANLDIERPTYTNLN 228          
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBA_TRYBR (Tubulin alpha chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 6.682e-100
Identity = 179/228 (78.51%), Postives = 195/228 (85.53%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIER---THLN 703
            MRE I IHIGQAG QVGNACWEL+CLEHGIQPDG M SDKT+G  DDAFNTFFSETGAGKHVPRAVFLDLEPTV+DEVRTG YRQLFHPEQLISGKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLV+HAV                 VDYGKKSKLG+TVYPSPQVST+VVEPYNSVLSTHSLL+HTDV+ +L+NE IY++   +L+IER   T+LN
Sbjct:    1 MREAICIHIGQAGCQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAAMLDNEAIYDLTRRNLDIERPTYTNLN 228          
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBAE_PHYPO (Tubulin alpha-2B chain OS=Physarum polycephalum GN=ALTBE PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 4.331e-99
Identity = 171/226 (75.66%), Postives = 192/226 (84.96%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIERTHLNN 706
            MRE +SIHIGQAG QVGNACWELYCLEHGI+PDGQM SDK+VGGGDDAFNTFFSET +GKHVPRA+FLDLEPTVIDE+RTG YRQLFHPEQLI+GKEDAANN+ARGHYT+GKE+VDLCLDR+RKLAD C+GLQGFLVFH+V                 VDYGKKSKL F VYPSPQVST+VVEPYNSVLSTH LL+HTDV+ +L+NE IY++C  SL+IER    N
Sbjct:    1 MREILSIHIGQAGAQVGNACWELYCLEHGIKPDGQMPSDKSVGGGDDAFNTFFSETSSGKHVPRAIFLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELVDLCLDRVRKLADQCSGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKSKLDFCVYPSPQVSTAVVEPYNSVLSTHGLLEHTDVAFMLDNEAIYDLCKRSLDIERPSYAN 226          
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBAN_PHYPO (Tubulin alpha-1B chain OS=Physarum polycephalum GN=ALTBN PE=2 SV=2)

HSP 1 Score: 360.533 bits (924), Expect = 7.388e-99
Identity = 171/226 (75.66%), Postives = 191/226 (84.51%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIERTHLNN 706
            MRE ISIHIGQAG QVGNACWELYCLEHGI PDGQM SDK+VGGGDDAFNTFFSET +GKHVPRA++LDLEPTVIDE+RTG YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDLCLDR+RKLAD C+GLQGFLVFH+V                 VDYGKKSKL F VYPSPQVST+VVEPYNSVLSTH LL+HTDV+ +L+NE IY++C  SL+I+R    N
Sbjct:    1 MREIISIHIGQAGAQVGNACWELYCLEHGINPDGQMPSDKSVGGGDDAFNTFFSETSSGKHVPRAIYLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLCLDRVRKLADQCSGLQGFLVFHSVGGGTGSGFGSLLLERLSVDYGKKSKLDFCVYPSPQVSTAVVEPYNSVLSTHGLLEHTDVAFMLDNEAIYDLCKKSLDIDRPSYAN 226          
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBA1_ARATH (Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 9.649e-99
Identity = 176/226 (77.88%), Postives = 192/226 (84.96%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIERTHLNN 706
            MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG M SD TVG   DAFNTFFSET +G+HVPRAVFLDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIVD CL+R+RKLADNCTGLQGFLVF+AV                 VD+GKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLL+HTDV VLL+NE IY+IC  SL+IER   +N
Sbjct:    1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSN 226          
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBA1C_BOVIN (Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=1 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 1.260e-98
Identity = 169/228 (74.12%), Postives = 196/228 (85.96%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIER---THLN 703
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLISGKEDAANN+ARGHYTIGKEI+DL LDR+RKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ L+H+D + +++NE IY+IC  +L+IER   T+LN
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228          
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBA_TORMA (Tubulin alpha chain OS=Torpedo marmorata PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 2.150e-98
Identity = 169/228 (74.12%), Postives = 196/228 (85.96%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIER---THLN 703
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ L+H+D + +++NE IY+IC  +L+IER   T+LN
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228          
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBA3_DROME (Tubulin alpha-3 chain OS=Drosophila melanogaster GN=alphaTub84D PE=1 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 2.150e-98
Identity = 170/228 (74.56%), Postives = 195/228 (85.53%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIER---THLN 703
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKTVGGGDD+FNTFFSETGAGKHVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+FH+                  VDYGKKSKL F VYP+PQVST+VVEPYNS+L+TH+ L+H+D + +++NE IY+IC  +L+IER   T+LN
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228          
BLAST of EY744756 vs. ExPASy Swiss-Prot
Match: TBA1C_RAT (Tubulin alpha-1C chain OS=Rattus norvegicus GN=Tuba1c PE=1 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 2.150e-98
Identity = 169/228 (74.12%), Postives = 196/228 (85.96%), Query Frame = 2
Query:   29 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLKHTDVSVLLENETIYEICPPSLEIER---THLN 703
            MRECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+                  VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ L+H+D + +++NE IY+IC  +L+IER   T+LN
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228          
The following BLAST results are available for this feature:
BLAST of EY744756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 419
Match NameE-valueIdentityDescription
TBA5_MAIZE2.999e-10078.95Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV... [more]
TBA_TRYCR6.682e-10078.07Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1[more]
TBA_TRYBR6.682e-10078.51Tubulin alpha chain OS=Trypanosoma brucei rhodesie... [more]
TBAE_PHYPO4.331e-9975.66Tubulin alpha-2B chain OS=Physarum polycephalum GN... [more]
TBAN_PHYPO7.388e-9975.66Tubulin alpha-1B chain OS=Physarum polycephalum GN... [more]
TBA1_ARATH9.649e-9977.88Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=T... [more]
TBA1C_BOVIN1.260e-9874.12Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=... [more]
TBA_TORMA2.150e-9874.12Tubulin alpha chain OS=Torpedo marmorata PE=2 SV=1[more]
TBA3_DROME2.150e-9874.56Tubulin alpha-3 chain OS=Drosophila melanogaster G... [more]
TBA1C_RAT2.150e-9874.12Tubulin alpha-1C chain OS=Rattus norvegicus GN=Tub... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-B11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744756 ID=EY744756; Name=EY744756; organism=Citrus sinensis; type=EST; length=908bp
CTCAAATCTCTAACAAAATCACACAAGAATGAGAGAATGCATCTCAATTC
ACATCGGCCAGGCCGGTATCCAGGTTGGTAATGCCTGCTGGGAGCTCTAT
TGCCTCGAACATGGCATTCAGCCTGATGGGCAAATGTTAAGTGACAAAAC
AGTTGGAGGCGGAGATGATGCTTTCAACACATTCTTCAGTGAGACCGGCG
CCGGAAAGCACGTGCCACGCGCCGTGTTTTTGGACCTTGAACCAACTGTA
ATCGATGAAGTGAGGACTGGCGCCTACCGTCAGTTGTTTCACCCGGAGCA
ACTCATTAGCGGCAAAGAAGATGCTGCTAACAACTTTGCCAGAGGCCACT
ACACAATTGGGAAAGAGATTGTGGATTTGTGCCTTGATAGGATCAGGAAG
TTAGCTGATAACTGTACCGGTCTACAAGGGTTCCTCGTGTTCCACGCGGT
TGGTGGAGGAACAGGATCCGGGCTCGGGTCTTTGCTCCTTGAGAGGCTTT
CTGTTGATTACGGCAAGAAATCGAAACTGGGATTTACAGTTTACCCTTCA
CCTCAAGTTTCAACCTCAGTTGTTGAGCCTTACAACAGCGTTTTGTCCAC
TCACTCTCTGTTAAAACACACTGACGTTTCTGTGTTGCTTGAAAATGAAA
CAATCTACGAAATTTGTCCCCCTTCTCTTGAAATCGAAAGAACCCACTTA
AACAATTCTCAACAAACTTGTTTCTCAGGGGGATTCCTTCCTAAACGGCG
TCTCCTTTCTTTTTATGGGAACCTTAAACCGGGGAAGGAAAAAAAATTCC
CAAACAAAATTTAATCCCCCTACCCCCCCGAATTCCCTTTCTTGCTTTTC
AATCAAATGCGCCCCCTGGTTATCCCCCCAAAAAAAAAAGGCCCTCCCAC
AAAACACT
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