EY679662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AV_CAEEL (Histone H2A.V OS=Caenorhabditis elegans GN=htz-1 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 3.989e-11 Identity = 45/107 (42.06%), Postives = 57/107 (53.27%), Query Frame = 2 Query: 353 RIV*VSYICSLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKGQTYYSKAFAACYPKEMKNLTLSFKEP*PGEELFPHIPNPLIHK 673 ++V S LQFPVGR+HR LK+ Y+AAILEYLTAEVLELAGNASKDLK + + + + L K G + PHI L++K Sbjct: 18 KVVSRSARAGLQFPVGRIHRFLKQRTTSSGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLHLAIRGD-EELDTLIKATIAGGGVIPHIHRYLMNK 123
BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AV2_ORYSJ (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica GN=Os10g0418000 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.989e-11 Identity = 44/97 (45.36%), Postives = 52/97 (53.61%), Query Frame = 2 Query: 383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKGQTYYSKAFAACYPKEMKNLTLSFKEP*PGEELFPHIPNPLIHK 673 +QFPVGR+HR LK YTAAILEYLTAEVLELAGNASKDLK + + + + L K G + PHI LI+K Sbjct: 40 IQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGD-EELDTLIKGTIAGGGVIPHIHKSLINK 135
BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AV1_ORYSJ (Probable histone H2A variant 1 OS=Oryza sativa subsp. japonica GN=Os03g0162200 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.989e-11 Identity = 44/97 (45.36%), Postives = 52/97 (53.61%), Query Frame = 2 Query: 383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKGQTYYSKAFAACYPKEMKNLTLSFKEP*PGEELFPHIPNPLIHK 673 LQFPVGR+HR LK Y+AAILEYLTAEVLELAGNASKDLK + + + + L K G + PHI LI+K Sbjct: 39 LQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGD-EELDTLIKGTIAGGGVIPHIHKSLINK 134
BLAST of EY679662 vs. ExPASy Swiss-Prot
Match: H2AV1_ARATH (Histone H2A variant 1 OS=Arabidopsis thaliana GN=H2AV PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.803e-11 Identity = 43/97 (44.33%), Postives = 52/97 (53.61%), Query Frame = 2 Query: 383 LQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKGQTYYSKAFAACYPKEMKNLTLSFKEP*PGEELFPHIPNPLIHK 673 +QFPVGR+HR LK YTA+ILEYLTAEVLELAGNASKDLK + + + + L K G + PHI LI+K Sbjct: 37 IQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGD-EELDTLIKGTIAGGGVIPHIHKSLINK 132 The following BLAST results are available for this feature:
BLAST of EY679662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679662 ID=EY679662; Name=EY679662; organism=Citrus sinensis; type=EST; length=1010bpback to top |