EY679635

Overview
NameEY679635
Unique NameEY679635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1034
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.225e-32
Identity = 69/136 (50.74%), Postives = 88/136 (64.71%), Query Frame = 1
Query:  139 NHGFA-WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            N  FA W ++ +CE  F   WIL    KW P+  +TY  RL  R        +L PVD FV+T D   EPP++T NTVLS+L+VDYPV K++CYVSDD  + L F +L E S+FAK WVPFCKK+N++ RAP  YF
Sbjct:  302 NDAFALWLISVICEIWFAMSWILDQFPKWLPIERETYLDRLSLRFDKEGQPSQLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYF 437          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 5.501e-32
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W L+ +CE  F   WIL    KW+P+  +TY  RL  R        +L PVD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FA+ WVPFCKKY+++ RAP  YF
Sbjct:  298 WLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYF 427          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 5.501e-32
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W L+ +CE  F   WIL    KW+P+  +TY  RL  R        +L PVD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FA+ WVPFCKKY+++ RAP  YF
Sbjct:  298 WLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYF 427          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 9.383e-32
Identity = 68/129 (52.71%), Postives = 85/129 (65.89%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE-----LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  + +CE  F F WIL    KW P+  +TY  RL  R  +     L PVD FV+T D   EPP+IT NTVLS+LAVDYPV K++CYVSDD  + L F SL E ++FA+ WVPFCKKY+++ RAP  YF
Sbjct:  218 WMTSVICEIWFGFSWILDQFPKWCPINRETYVDRLIARYGDGEDSGLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYF 346          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 9.383e-32
Identity = 68/129 (52.71%), Postives = 85/129 (65.89%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE-----LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  + +CE  F F WIL    KW P+  +TY  RL  R  +     L PVD FV+T D   EPP+IT NTVLS+LAVDYPV K++CYVSDD  + L F SL E ++FA+ WVPFCKKY+++ RAP  YF
Sbjct:  218 WMTSVICEIWFGFSWILDQFPKWCPINRETYVDRLIARYGDGEDSGLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYF 346          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.225e-31
Identity = 69/136 (50.74%), Postives = 88/136 (64.71%), Query Frame = 1
Query:  136 KNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            KN    W  + +CE  F F W+L    KW P+  +TY  RL  R        +L PVD+FV+T D   EPP++T NTVLS+L+VDYPV K+ACYVSDD  + L F SL E ++FAK WVPFCKK+N++ RAP  YF
Sbjct:  298 KNAYPLWLTSVICEIWFAFSWLLDQFPKWYPINRETYLDRLAIRYDRDGEPSQLVPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKWVPFCKKFNIEPRAPEFYF 433          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.730e-31
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F   WIL    KW P+  +TY  RL  R        +L P+D FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FAK WVPFCKKY+++ RAP  YF
Sbjct:  308 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQTSQLAPIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKYSIEPRAPEWYF 437          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.082e-31
Identity = 65/130 (50.00%), Postives = 86/130 (66.15%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  + +CE  F F W+L    KW P+  +T+  RL  R        +L PVD+FV+T D   EPP++T NTVLS+LAVDYPV K+ACYVSDD  + L F +L E ++F+K WVPFCKK+N++ RAP  YF
Sbjct:  291 WLTSVICEIWFAFSWLLDQFPKWYPINRETFLDRLALRYDRDGEPSQLAPVDVFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVACYVSDDGSAMLTFEALSETAEFSKKWVPFCKKFNIEPRAPEFYF 420          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.082e-31
Identity = 65/130 (50.00%), Postives = 86/130 (66.15%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  + +CE  F   W+L    KW+P+  +TY  RL  R +      +L  VD FV+T D   EPP+IT NTVLS+LA+DYPV K++CYVSDD  + L+F SLVE + FA+ WVPFCKKY+++ RAP  YF
Sbjct:  213 WLTSVICEIWFAVSWVLDQFPKWSPINRETYIDRLSARFEREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYF 342          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.082e-31
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F   WIL    KW P+  +TY  RL  R        +L PVD FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FAK WVPFCK+Y+++ RAP  YF
Sbjct:  307 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQQSQLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYF 436          
The following BLAST results are available for this feature:
BLAST of EY679635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA6_ORYSJ3.225e-3250.74Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA2_ORYSJ5.501e-3251.54Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI5.501e-3251.54Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA4_ORYSJ9.383e-3252.71Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI9.383e-3252.71Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA1_ARATH1.225e-3150.74Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESA3_ORYSJ2.730e-3150.77Probable cellulose synthase A catalytic subunit 3 ... [more]
CESAA_ARATH6.082e-3150.00Probable cellulose synthase A catalytic subunit 10... [more]
CESA8_ARATH6.082e-3150.00Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CESA5_ORYSJ6.082e-3150.77Probable cellulose synthase A catalytic subunit 5 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-D03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679635 ID=EY679635; Name=EY679635; organism=Citrus sinensis; type=EST; length=1034bp
CTCATGGCCAATACAAAGTCGTCATGTCTCCCTCTATACGAAAAAGTTTT
TCATAAAAACACATATCATAGGGCTTTAGATGTTATCATCTTGTTCCTTC
TTCTATGTCTGCTCTTCTATCGGCTCTCAACGTTGAAGAATCATGGATTT
GCTTGGTTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTTTCATCTGGAT
TCTCATCGTCAACTGCAAGTGGACTCCTTTGACCTACAAAACATATCCCC
AACGTCTCCAAGAAAGGATACAGGAGCTGCCCCCAGTGGACATGTTTGTG
ACAACTGCTGATGCTGAACTCGAGCCGCCAATCATCACTGTAAACACAGT
GCTGTCTTTGTTGGCAGTTGATTATCCAGTTCACAAGCTCGCTTGCTATG
TTTCTGATGATGCCTGCTCACCTCTCAATTTCTACTCTCTTGTTGAAGCT
TCTAAATTTGCTAAGCTTTGGGTTCCATTCTGTAAAAAGTATAATGTTCA
AATTAGAGCTCCCTTTAGATACTTCCCAGATAGTGAGCCGTCCGATTCCA
GTTCAGGGGAACTCCTGCAAGACTGGAAAAACATGAAGAAAGAATAAGAA
AAACTTAGCCAAAACATAAGAACATGCAGCCAAAAAATCTTCTTTTTTTG
AATTCAACGGAAAAAAATGACTGGTTTTTCCCCAAAACGAAACCCCTGAA
TCCTCCCACAAATATTAAAGGTTATTTCGGAAAAAAAAAGGAAGGTCTCC
CAAATTAAAATCCCCCATTTAATTTTACTATTCAAGAAAAGAAAAGGCCA
AACCATTCCCCTTCCCTAACAGAGGCGGGGGGGCCTAGAAGGGTTTTGGA
CTGGCAAGCTATGTAGGCCCACCATATCCCCAAAAATTGGTTCTTTTCCA
CCCTATTGGGTGTTTGCAACTGGGGGGGTCGCCAAGGAAAAAAGAAAAAA
AAAAATTTTGCGGTGTTTATTCTTATTCTCTCTCCCCGATTTTTTTTTCT
TTAAAATGAAATCAAAAACGCAAAAAAAAATTTA
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