EY679635

Overview
NameEY679635
Unique NameEY679635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1034
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.082e-31
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F   WIL    KW P+  +TY  RL  R        +L PVD FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FAK WVPFCK+Y+++ RAP  YF
Sbjct:  307 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQQSQLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYF 436          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.037e-30
Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE------LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F   W+L    KW P+  +TY  RL  R ++      L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L E ++FA+ WVPFCKKY ++ RAP  YF
Sbjct:  305 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLRYEKEGKPSGLSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYCIEPRAPEWYF 434          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.037e-30
Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F   WIL    KW P+  +TY  RL  R        +L  VD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L+F SL E S+FA+ WVPFCKKY+++ RAP  YF
Sbjct:  288 WLVSVICEIWFALSWILDQFPKWFPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLAETSEFARKWVPFCKKYSIEPRAPEWYF 417          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.037e-30
Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE------LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  + +CE  F   WIL    KW P+  +TY  RL  R ++      L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L + ++FA+ WVPFCKK+N++ RAP  YF
Sbjct:  306 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSGLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKKFNIEPRAPEWYF 435          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.770e-30
Identity = 65/130 (50.00%), Postives = 85/130 (65.38%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE------LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  + +CE  F   WIL    KW P+  +TY  RL  R +       L PVD+FV+T D   EPP++T NTVLS+LA+DYPV K++CYVSDD  S L F SL E ++FA+ WVPFCKK++++ RAP  YF
Sbjct:  267 WLTSVICEIWFAVSWILDQFPKWFPIERETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYF 396          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.311e-30
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE------LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  + +CE  F   WIL    KW+P+T +TY  RL  R +       L P+D FV+T D   EPPIIT NTVLS+LAVDYPV +++CYVSDD  S L F +L E ++FA+ WVPFCKK+ ++ RAP  YF
Sbjct:  242 WLASVICELWFALSWILDQLPKWSPVTRETYLDRLALRYERDGEPCRLAPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVDRVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKFTIEPRAPEFYF 371          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.311e-30
Identity = 64/130 (49.23%), Postives = 86/130 (66.15%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F   W+L    KW P+  +TY  RL  R        +L P+D+FV+T D   EPP+IT NTVLS+LAVDYPV K++CYVSDD  + L F +L E ++FA+ WVPFCKK+N++ RAP  YF
Sbjct:  301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.311e-30
Identity = 64/130 (49.23%), Postives = 86/130 (66.15%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F   W+L    KW P+  +TY  RL  R        +L P+D+FV+T D   EPP+IT NTVLS+LAVDYPV K++CYVSDD  + L F +L E ++FA+ WVPFCKK+N++ RAP  YF
Sbjct:  301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.018e-30
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  + +CE  F   WIL    KW P+  +TY  RL  R +      EL PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L   ++FA+ WVPFCKK++++ RAP  YF
Sbjct:  311 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSYTAEFARKWVPFCKKFSIEPRAPEWYF 440          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 3.018e-30
Identity = 65/130 (50.00%), Postives = 85/130 (65.38%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F   W+L    KW P+  +TY  RL  R +      EL  VD+FV+T D   EPP+IT NTVLS+LAVDYPV ++ACYVSDD  + L F +L E ++FA+ WVPFCKKY ++ RAP  YF
Sbjct:  293 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLRYEKEGKPSELAGVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDRVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYTIEPRAPEWYF 422          
The following BLAST results are available for this feature:
BLAST of EY679635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA5_ORYSI6.082e-3150.77Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA6_ARATH1.037e-3050.77Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CESA3_ARATH1.037e-3050.77Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA2_ARATH1.037e-3050.77Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA7_ARATH1.770e-3050.00Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA7_ORYSJ2.311e-3050.77Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA1_ORYSJ2.311e-3049.23Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI2.311e-3049.23Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA9_ARATH3.018e-3050.77Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA5_ARATH3.018e-3050.00Cellulose synthase A catalytic subunit 5 [UDP-form... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-D03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679635 ID=EY679635; Name=EY679635; organism=Citrus sinensis; type=EST; length=1034bp
CTCATGGCCAATACAAAGTCGTCATGTCTCCCTCTATACGAAAAAGTTTT
TCATAAAAACACATATCATAGGGCTTTAGATGTTATCATCTTGTTCCTTC
TTCTATGTCTGCTCTTCTATCGGCTCTCAACGTTGAAGAATCATGGATTT
GCTTGGTTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTTTCATCTGGAT
TCTCATCGTCAACTGCAAGTGGACTCCTTTGACCTACAAAACATATCCCC
AACGTCTCCAAGAAAGGATACAGGAGCTGCCCCCAGTGGACATGTTTGTG
ACAACTGCTGATGCTGAACTCGAGCCGCCAATCATCACTGTAAACACAGT
GCTGTCTTTGTTGGCAGTTGATTATCCAGTTCACAAGCTCGCTTGCTATG
TTTCTGATGATGCCTGCTCACCTCTCAATTTCTACTCTCTTGTTGAAGCT
TCTAAATTTGCTAAGCTTTGGGTTCCATTCTGTAAAAAGTATAATGTTCA
AATTAGAGCTCCCTTTAGATACTTCCCAGATAGTGAGCCGTCCGATTCCA
GTTCAGGGGAACTCCTGCAAGACTGGAAAAACATGAAGAAAGAATAAGAA
AAACTTAGCCAAAACATAAGAACATGCAGCCAAAAAATCTTCTTTTTTTG
AATTCAACGGAAAAAAATGACTGGTTTTTCCCCAAAACGAAACCCCTGAA
TCCTCCCACAAATATTAAAGGTTATTTCGGAAAAAAAAAGGAAGGTCTCC
CAAATTAAAATCCCCCATTTAATTTTACTATTCAAGAAAAGAAAAGGCCA
AACCATTCCCCTTCCCTAACAGAGGCGGGGGGGCCTAGAAGGGTTTTGGA
CTGGCAAGCTATGTAGGCCCACCATATCCCCAAAAATTGGTTCTTTTCCA
CCCTATTGGGTGTTTGCAACTGGGGGGGTCGCCAAGGAAAAAAGAAAAAA
AAAAATTTTGCGGTGTTTATTCTTATTCTCTCTCCCCGATTTTTTTTTCT
TTAAAATGAAATCAAAAACGCAAAAAAAAATTTA
back to top