EY679635

Overview
NameEY679635
Unique NameEY679635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1034
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.475e-24
Identity = 51/122 (41.80%), Postives = 78/122 (63.93%), Query Frame = 1
Query:  160 LAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            L  L +    F+W    + ++ P+    YP++     ++ P +D+F+ TAD   EPP++ VNT LS++A +YP  K++ YVSDD  S L  ++L+EA+KF+K W+PFCKK NVQ R+P  YF
Sbjct:   78 LLLLSDIVLAFMWATTTSLRYKPVRRTEYPEKYAAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYF 199          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.222e-24
Identity = 51/122 (41.80%), Postives = 78/122 (63.93%), Query Frame = 1
Query:  160 LAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            L  L +    F+W    + +  P+     P++   + ++ P +D+F+ TAD   EPP++ VNT LS++A +YP  K++ YVSDD  S L F++L+EA+KF+K W+PFCKK NVQ R+P  YF
Sbjct:   59 LLLLSDIVLAFMWATTTSLRLNPVHRTECPEKYAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYF 180          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.095e-23
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ-----------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F F W+L    K  P+        L+E+ +           +LP +D+F++TAD   EP ++T NT+LS+LA +YPV KL  Y+SDD  + L F S+ EA  FAK+WVPFC+K++++ R P  YF
Sbjct:  184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEKFESPSPTNPTGRSDLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYF 318          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.095e-23
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ-----------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ +CE  F F W+L    K  P+        L+E+ +           +LP +D+F++TAD   EP ++T NT+LS+LA +YPV KL  Y+SDD  + L F S+ EA  FAK+WVPFC+K++++ R P  YF
Sbjct:  184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEKFESPSPTNPTGRSDLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYF 318          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.574e-23
Identity = 57/130 (43.85%), Postives = 74/130 (56.92%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE------LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  +  CE      W++    K +P    TY  RL  R ++      L  VD+FV  ADA  EPP+ T NTVLS+LA DYP   +ACYV DD    L F SL EA+ FA+ W+PFC+++ V+ RAP  YF
Sbjct:   77 WVTSVACELWLAASWLIAQLPKLSPANRVTYLDRLASRYEKGGEASRLAGVDVFVAAADAAREPPLATANTVLSVLAADYPAGGVACYVHDDGADMLVFESLFEAAGFARRWIPFCRRHGVEPRAPELYF 206          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.668e-23
Identity = 55/131 (41.98%), Postives = 85/131 (64.89%), Query Frame = 1
Query:  136 KNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ-ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            ++  + W ++ + +  F F W+L    K +P+        L +R   +LP VD+FVTT D   EP + TVNT+LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ R+P  YF
Sbjct:   91 RDGAWLWTMSMVGDVWFGFSWVLNQLPKQSPIKRVPDIAALADRHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYF 221          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.096e-23
Identity = 55/125 (44.00%), Postives = 82/125 (65.60%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ-ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W ++ + +  F F W+L    K +P+        L +R   +LP VD+FVTT D   EP + TVNT+LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ R+P  YF
Sbjct:  127 WTMSMVGDVWFGFSWVLNQLPKLSPIKRVPDLAALADRHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYF 251          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.358e-22
Identity = 56/124 (45.16%), Postives = 76/124 (61.29%), Query Frame = 1
Query:  154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            W  +   E  F F+W+L    K  P+        L +    LP +D+FVTTAD + EPP+ T NTVLS+LA  YP  K+ CYVSDDA + +   ++VEA++FA LWVPFC+K+ V+ R P  YF
Sbjct:  102 WTASIAGELWFAFMWVLDQLPKTMPVRRAVDVTALNDDTL-LPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYF 224          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.317e-22
Identity = 57/137 (41.61%), Postives = 83/137 (60.58%), Query Frame = 1
Query:  136 KNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ-------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            ++  + W ++   +  F F W L    K  P+        L +R Q       ELP VD+FVTT D   EP + TVN++LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ RAP  YF
Sbjct:  121 RDGAWLWTMSMAGDVWFGFSWALNQLPKLNPIKRVADLAALADRQQHGTSGGGELPGVDVFVTTVDPVDEPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYF 257          
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.150e-21
Identity = 53/132 (40.15%), Postives = 79/132 (59.85%), Query Frame = 1
Query:  148 FAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQ------ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525
            F W+++ + +  F   W+L    K  P+        LQ++         LP +D+F+ T D   EP I T+N +LS+LA DYPV K ACY+SDD  S +++  L+E +KFA LWVPFC+K++++ RAP  YF
Sbjct:  120 FFWWISVIGDFWFGVSWLLNQVAKLKPIRRVPDLNLLQQQFDLPDGNSNLPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYF 251          
The following BLAST results are available for this feature:
BLAST of EY679635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLG3_ARATH2.475e-2441.80Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CSLG1_ARATH4.222e-2441.80Cellulose synthase-like protein G1 OS=Arabidopsis ... [more]
CSLD5_ORYSJ2.095e-2340.00Cellulose synthase-like protein D5 OS=Oryza sativa... [more]
CSLD5_ORYSI2.095e-2340.00Putative cellulose synthase-like protein D5 OS=Ory... [more]
CESAB_ORYSJ3.574e-2343.85Putative cellulose synthase A catalytic subunit 11... [more]
CSLF1_ORYSJ4.668e-2341.98Putative mixed-linked glucan synthase 1 OS=Oryza s... [more]
CSLF2_ORYSJ6.096e-2344.00Mixed-linked glucan synthase 2 OS=Oryza sativa sub... [more]
CSLF7_ORYSJ1.358e-2245.16Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]
CSLF4_ORYSJ2.317e-2241.61Mixed-linked glucan synthase 4 OS=Oryza sativa sub... [more]
CSLF8_ORYSJ1.150e-2140.15Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-D03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679635 ID=EY679635; Name=EY679635; organism=Citrus sinensis; type=EST; length=1034bp
CTCATGGCCAATACAAAGTCGTCATGTCTCCCTCTATACGAAAAAGTTTT
TCATAAAAACACATATCATAGGGCTTTAGATGTTATCATCTTGTTCCTTC
TTCTATGTCTGCTCTTCTATCGGCTCTCAACGTTGAAGAATCATGGATTT
GCTTGGTTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTTTCATCTGGAT
TCTCATCGTCAACTGCAAGTGGACTCCTTTGACCTACAAAACATATCCCC
AACGTCTCCAAGAAAGGATACAGGAGCTGCCCCCAGTGGACATGTTTGTG
ACAACTGCTGATGCTGAACTCGAGCCGCCAATCATCACTGTAAACACAGT
GCTGTCTTTGTTGGCAGTTGATTATCCAGTTCACAAGCTCGCTTGCTATG
TTTCTGATGATGCCTGCTCACCTCTCAATTTCTACTCTCTTGTTGAAGCT
TCTAAATTTGCTAAGCTTTGGGTTCCATTCTGTAAAAAGTATAATGTTCA
AATTAGAGCTCCCTTTAGATACTTCCCAGATAGTGAGCCGTCCGATTCCA
GTTCAGGGGAACTCCTGCAAGACTGGAAAAACATGAAGAAAGAATAAGAA
AAACTTAGCCAAAACATAAGAACATGCAGCCAAAAAATCTTCTTTTTTTG
AATTCAACGGAAAAAAATGACTGGTTTTTCCCCAAAACGAAACCCCTGAA
TCCTCCCACAAATATTAAAGGTTATTTCGGAAAAAAAAAGGAAGGTCTCC
CAAATTAAAATCCCCCATTTAATTTTACTATTCAAGAAAAGAAAAGGCCA
AACCATTCCCCTTCCCTAACAGAGGCGGGGGGGCCTAGAAGGGTTTTGGA
CTGGCAAGCTATGTAGGCCCACCATATCCCCAAAAATTGGTTCTTTTCCA
CCCTATTGGGTGTTTGCAACTGGGGGGGTCGCCAAGGAAAAAAGAAAAAA
AAAAATTTTGCGGTGTTTATTCTTATTCTCTCTCCCCGATTTTTTTTTCT
TTAAAATGAAATCAAAAACGCAAAAAAAAATTTA
back to top