EY679635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.561e-21 Identity = 56/132 (42.42%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQR--------LQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525 W ++ + F F W+L K+ P+ KT P L + LP +D+FVTTAD EP + T+N VLS+LA DYPV + ACY+SDD+ + + + +LVE +KFA LWVPFC+K+ ++ R+P YF Sbjct: 120 WTMSVAGDVWFGFSWLLNQLPKFNPV--KTIPDLTALRQYCDLADGSYRLPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYF 249
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.561e-21 Identity = 56/132 (42.42%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQR--------LQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525 W ++ + F F W+L K+ P+ KT P L + LP +D+FVTTAD EP + T+N VLS+LA DYPV + ACY+SDD+ + + + +LVE +KFA LWVPFC+K+ ++ R+P YF Sbjct: 120 WTMSVAGDVWFGFSWLLNQLPKFNPV--KTIPDLTALRQYCDLADGSYRLPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYF 249
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.698e-20 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE------LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525 W + E F F W+L K P+ L+ R LP +D+FVTTAD EP + T N++LS+LA DYPV + CY+SDD+ L + ++ EA+KFA LWVPFC+K+ ++ R P YF Sbjct: 136 WVTSIAGEFWFGFSWLLDQLPKLNPINRVPDLAVLRRRFDHADGTSSLPGLDIFVTTADPIKEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRGPESYF 265
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 8.239e-20 Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 154 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQE--LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 525 W+++ + F W+L K P+ L+ R + LP +D+F+ T D EP + T+N++LS+LA DYP + A Y+SDD S ++ L+E ++FA LWVPFC+K+ V+ RAP YF Sbjct: 108 WWISIAGDFWFGVTWLLNQASKLNPVKRVPDLSLLRRRFDDGGLPGIDVFINTVDPVDEPMLYTMNSILSILATDYPADRHAAYLSDDGASLAHYEGLIETARFAALWVPFCRKHRVEPRAPESYF 233
BLAST of EY679635 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 3.240e-16 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 385 KLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKE*EKLSQNIRTCSQ 633 +LACYVSDD CSP+ +Y+L EA+ FA+ WVPFC+++ V +RAPFRYF DW MK E +KL + I + Sbjct: 173 RLACYVSDDGCSPVTYYALREAAGFARTWVPFCRRHGVAVRAPFRYFASAPEFGPADRKFLDDWTFMKSEYDKLVRRIEDADE 255 The following BLAST results are available for this feature:
BLAST of EY679635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679635 ID=EY679635; Name=EY679635; organism=Citrus sinensis; type=EST; length=1034bpback to top |