EY679627

Overview
NameEY679627
Unique NameEY679627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALPA (Probable sugar efflux transporter OS=Salmonella paratyphi A GN=sotB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.470e-18
Identity = 63/224 (28.12%), Postives = 104/224 (46.43%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLLL G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRCPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLLLGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_KLEP3 (Probable sugar efflux transporter OS=Klebsiella pneumoniae (strain 342) GN=sotB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.470e-18
Identity = 64/226 (28.32%), Postives = 101/226 (44.69%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGA---VMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A   GIP+G +  +   G RM FL   +  +  L   + L+P L  E +  +  LP LF  P      I  +++  AH+ AY+Y+ PF +  +G  G     LLL+ G AG++G++  G   N   +H   L+++ IG   A           A   ++L   WG A         + +   AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVFGIPIGRIIGQY-FGWRMTFLAIGLGALATLACLVKLLPTLPSEHSGSLKSLPVLFRRPALVSVYILTVVVVTAHYTAYSYIEPFVQTVAGLSGNFATVLLLILGGAGIIGSILFGKLGN---QHASGLISIAIGLLLACLLLLLPASDNAHHLMLLSIFWGVAIMIIGLGMQVKVLASAPDATDVAMSLFSGIFNIGIGAGALVGSQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ENT38 (Probable sugar efflux transporter OS=Enterobacter sp. (strain 638) GN=sotB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.470e-18
Identity = 66/226 (29.20%), Postives = 104/226 (46.02%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTA---LFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S++  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +  +GF       LLL+ G AG++G+V  G   N   +H  LLV+  IG   A   L    A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G QI
Sbjct:  135 RAQALSLLATGTALAMVLGLPIGRIVGQY-FGWRTTFFAIGLGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQVVAGFSANFATVLLLILGGAGIIGSVLFGKLGN---KHASLLVSSAIGLLLACLLLLMPAAQSETHLAILSIFWGVAIMIIGLGMQVKVLALAPDATDVAMSLFSGIFNIGIGAGALVGNQI 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALNS (Probable sugar efflux transporter OS=Salmonella newport (strain SL254) GN=sotB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.757e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALISLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ESCF3 (Probable sugar efflux transporter OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sotB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.664e-17
Identity = 63/224 (28.12%), Postives = 103/224 (45.98%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S++  G   A  LG+P+G +  +   G R  FL   V     LL  + L+P L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G+V  G   N      + + +AL++     L P   +    A++ I  WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLLATGTALAMVLGLPVGRIVGQY-FGWRTTFLAIGVGAFLTLLCLIKLLPLLPSEHSGSLKSLPVLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGLSANFATVLLLILGGAGIIGSVIFGKLGNNHASVLVSVAIALLMACLLLLMPASVSETHLAILSI-FWGIAIMMIGLGMQVKVLALAPDATDVAMSLFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_CITK8 (Probable sugar efflux transporter OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sotB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.839e-17
Identity = 58/223 (26.01%), Postives = 100/223 (44.84%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  L+  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +  +G        LLL+ G AG++G+V  G   N+     + +  +++     L    A   S   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRIVGQY-FGWRTTFFAIGIGALITLVCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQTVAGLSANFATVLLLILGGAGIIGSVVFGKLGNQYASPLISIAIMLLVICLMLLLPAADSESHLAVLSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEA7 (Probable sugar efflux transporter OS=Pseudomonas aeruginosa (strain PA7) GN=sotB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.324e-17
Identity = 68/233 (29.18%), Postives = 104/233 (44.64%), Query Frame = -2
Query:   35 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 733
            VAPP      + +A  ++  G   A  LGIPLG +     LG R  F+  A + +  LL  +  +P L  + +  +  LP LF  P      I  +++  A F AY+Y+ PF +  +   G     LLLL+G AG+ G++     +    R  LL   L +GTS AL   F+   +  + L  LWG +   F       +  +A    +  M LF  L+ V I  G+  G  +
Sbjct:  129 VAPP----GQQAKALGLLATGTTLAMVLGIPLGRVVGEA-LGWRTTFMAIAGLSVLTLLYLVRSLPPLPSQNSGSLRSLPMLFRRPALVCLYILTVVVISAQFTAYSYIEPFARQVAQMGGEATTLLLLLFGGAGIFGSLLFSRYSEAFPRGFLLAAILALGTSLALLLPFSAQPTWLMALSVLWGMSIMCFGLAQQSRVLRLASDATDVAMALFSGLYNVGIGAGALLGSVV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALAR (Probable sugar efflux transporter OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sotB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.079e-16
Identity = 62/226 (27.43%), Postives = 102/226 (45.13%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIG---TSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  L+  + L+P+L  E +  +  LP LF  P      +   ++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   N   +H  LLV++ I        L    A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLICLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYLLTAVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGN---QHASLLVSIAISLLVVCLLLLLPAADSEAHLALLSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALAGNQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_SALPB (Purine ribonucleoside efflux pump nepI OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=nepI PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.840e-16
Identity = 51/195 (26.15%), Postives = 93/195 (47.69%), Query Frame = -2
Query:   29 LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 613
            +G R  F   AV+G+  ++  +  +P L  E + +  ++ +L   P    G+IA+ +     FA +TY+ P + N +GFD   +  +LL +G+A  +G  F+ +   RSV+  L    L++  S      + +  + A ++  +WG AF   P   S W+        E+   + VA+ Q+    G+  GG  +D
Sbjct:  171 IGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAVIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGGYALD 365          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_SALG2 (Purine ribonucleoside efflux pump nepI OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=nepI PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.840e-16
Identity = 51/195 (26.15%), Postives = 93/195 (47.69%), Query Frame = -2
Query:   29 LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 613
            +G R  F   AV+G+  ++  +  +P L  E + +  ++ +L   P    G+IA+ +     FA +TY+ P + N +GFD   +  +LL +G+A  +G  F+ +   RSV+  L    L++  S      + +  + A ++  +WG AF   P   S W+        E+   + VA+ Q+    G+  GG  +D
Sbjct:  171 IGWRNVFNAAAVMGVLCVIWVVKSLPSLPGEPSHQKQNMFSLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFDVDGLTLVLLSFGIASFVGTSFSSYVLKRSVKLALAGAPLLLALSALTLIVWGSDKTVAAVIAIIWGLAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAVGGYALD 365          
The following BLAST results are available for this feature:
BLAST of EY679627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
SOTB_SALPA7.470e-1828.13Probable sugar efflux transporter OS=Salmonella pa... [more]
SOTB_KLEP37.470e-1828.32Probable sugar efflux transporter OS=Klebsiella pn... [more]
SOTB_ENT387.470e-1829.20Probable sugar efflux transporter OS=Enterobacter ... [more]
SOTB_SALNS9.757e-1827.68Probable sugar efflux transporter OS=Salmonella ne... [more]
SOTB_ESCF31.664e-1728.13Probable sugar efflux transporter OS=Escherichia f... [more]
SOTB_CITK82.839e-1726.01Probable sugar efflux transporter OS=Citrobacter k... [more]
SOTB_PSEA76.324e-1729.18Probable sugar efflux transporter OS=Pseudomonas a... [more]
SOTB_SALAR1.079e-1627.43Probable sugar efflux transporter OS=Salmonella ar... [more]
NEPI_SALPB1.840e-1626.15Purine ribonucleoside efflux pump nepI OS=Salmonel... [more]
NEPI_SALG21.840e-1626.15Purine ribonucleoside efflux pump nepI OS=Salmonel... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-C07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679627 ID=EY679627; Name=EY679627; organism=Citrus sinensis; type=EST; length=1007bp
CCTGCGGGTCCNGGTCCCGGAATTCCGGGTCGACAATCTGCCCGCCAAAG
AACGAGCCCACGGCAATGATCACCTGGAACAACGCGACGAACAGCGGCAT
GCCACGTTCCACATCCTTGGGCGCCACCACAAACATCCAGATACTCGCGC
AGGCCGGGAAGGCGCCGAAGGCGAAGCCCCACAGTGCGATCAGCATCACG
GCGCCGCTCATGCCGGTGGCGAAGTAGGGGAACAGGGCAGTGCTGGTGCC
GATCATCAGGGCCACCAGCAGCAGGGTGTGGCGCACGCTGCGGTTGGCGG
CGAAGCCGGCGAAGACGTTGCCCATTACGCCGGCCACGCCGTAGAGCAGC
AGCAGCGAGCCAATGGTCGGGCCGTCGAAGCCGGAGCTGTTTTTGAAGAA
CGGGGCGACGTAGGTGTAGGCGGCAAAGTGCGCGAGGCCGATCAGCAGCA
CGGCGATCAAGCCGACCCGGGCTTGTGGGTTGATGAACAGGGCCGGCAGG
TCGCTGATGCGGATGGCTTTTTCCGGTTCGAGGCGCGGCACCAGGAACAT
CTGCGCCAGCAGTACCGGGATGCCCACCACCGCGGTGACAAGGAAAGGCA
TGCGCCCGCCCAATCAGGGCCGCTCATCCAGGTGGCCAAGGGGTATGCCG
AGGAAGGGGGCCCAGGGTCAGCCCATCAGGATGATTGAGGGGGCTTCACA
ACGCCCACGCCATGGGAAGCAGGGGGGCGCGACTAAAGAAACCCAGGGTA
AGGTCAACTTGGAGGAAAAAACTTAAACTTTTACAGTGGCCACCAAATTA
AAGTCAGGGGCCCCATTCTTCCCAGCTGCGGCGGGGGAAAACGCAGGCAG
TCCCCAAATGTATATGCCTTGGTGCGAAAATTCCCCTGTTTCTGCCAGCG
GGGGGATGAACGAAGGGAGGGCCGCCCCCTAGCGTGCGCCTGATAGGAAC
AAAGAGTGCACCACACACAAGAAAAAAAAAAAGGAAGTAAAACGCACGAA
GAAAGAA
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