EY679620

Overview
NameEY679620
Unique NameEY679620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.138e-41
Identity = 99/234 (42.31%), Postives = 129/234 (55.13%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIAST---------LKEAGG-----------VPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCI-PKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            ++M+ +DG+QGP+YVGTGCVFRR ALYG+       PPR                                  ++  L              S+++P     K+FG S  F+AS          L++  G           VP     A+ + EAI VISC YE+KT+WG+ IGWIYGSVTED++TG++MH  GWRSVYC+ P+R AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  735 VSMRAMDGLQGPMYVGTGCVFRRTALYGFS------PPRATEHHGWLGRRKIKLFLTKKKSMGKKTDRAEDDTEMM-LPPIEDDDGGADIEASAMLP-----KRFGGSATFVASIPVAEYQGRLLQDTPGCHHGRPAGALAVPREPLDAATVAEAIGVISCFYEEKTEWGRRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIF 956          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.138e-41
Identity = 102/234 (43.59%), Postives = 123/234 (52.56%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIASTLKEA--------------GGVPTGAST-------ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            +NM+ LDG+ GP+YVGTGC+FRR ALYG+D      PPR                                                      SL+P     KKFG S  F+  ++  A               G P GA T       AS + EAI VISC YEDKT+WG  IGWIYGSVTED++TG++MH  GW+SVYC+ KR AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  688 VNMRALDGLMGPVYVGTGCLFRRIALYGFD------PPRAKEHHPGFCSCCFSRKKKKSRVPEENRSLRMGGDS-----------DDDEEMNLSLVP-----KKFGNS-TFLIDSIPVAEFQGRPLADHPAVQNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 898          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.323e-41
Identity = 101/234 (43.16%), Postives = 123/234 (52.56%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIASTLKEA--------------GGVPTGAST-------ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            +NM+ LDG+ GP+YVGTGC+FRR ALYG++      PPR                                                      SL+P     KKFG S  F+  ++  A               G P GA T       AS + EAI VISC YEDKT+WG  IGWIYGSVTED++TG++MH  GW+SVYC+ KR AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  691 VNMRALDGLMGPVYVGTGCLFRRIALYGFN------PPRSKDFSPSCWSCCFPRSKKKNIPEENRALRMSDYDD--------------EEMNLSLVP-----KKFGNS-TFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 898          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 9.631e-41
Identity = 92/213 (43.19%), Postives = 116/213 (54.46%), Query Frame = 1
Query:   19 NMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKK-FGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            NM+ LDG+QGP+YVGTGC+FRR A+YG+D      PPR                                  ++ +               S  +P  +F+ +     P  +      A  VP        + EA+ VISC YEDKT+WG  +GWIYGSVTED++TG++MH  GWRSVYCI KR AF G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  693 NMRALDGLQGPMYVGTGCMFRRFAVYGFD------PPRTAEYTGWLFTKKKVTTFKDPESDTQTLKAEDFDAELTSHLVPRRFGNSSPFMAS--IPVAEFQARPLADHPAVLHGRPSGALTVPRPPLDPPTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLRWATGSVEIF 897          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.540e-33
Identity = 63/92 (68.48%), Postives = 76/92 (82.61%), Query Frame = 1
Query:  379 VPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            VP     A+ + E++ VISC YEDKT+WG  +GWIYGSVTED++TG++MH  GWRSVYCI KR +F+GSAPINL+DRLHQVLRWA GSVEIF
Sbjct:  768 VPRDPLDATTVAESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIF 859          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.333e-33
Identity = 72/141 (51.06%), Postives = 92/141 (65.25%), Query Frame = 1
Query:  292 SSLMPQIKFEKKFGQSPVFIASTL-------------KEAGGVPTGAST-------ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            S+  P  +  +KFG+S +FI S                   G P GA         A+ + E++ VISC YED T+WG+ +GWIYGSVTED++TG++MH  GWRSVYCI +R AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  627 STAHPDHEAPQKFGKSKMFIESIAVAEYQGRPLQDHPSVLNGRPPGALLMPRPPLDAATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIF 767          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.333e-33
Identity = 72/141 (51.06%), Postives = 92/141 (65.25%), Query Frame = 1
Query:  292 SSLMPQIKFEKKFGQSPVFIASTL-------------KEAGGVPTGAST-------ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            S+  P  +  +KFG+S +FI S                   G P GA         A+ + E++ VISC YED T+WG+ +GWIYGSVTED++TG++MH  GWRSVYCI +R AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  627 STAHPDHEAPQKFGKSKMFIESIAVAEYQGRPLQDHPSVLNGRPPGALLMPRPPLDAATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIF 767          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.660e-33
Identity = 71/126 (56.35%), Postives = 92/126 (73.02%), Query Frame = 1
Query:  376 GVPTGASTAS-------LLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFT*QALSDMVWIWGVD*KPLERFSYIN 732
            G P G+ T S        +NEA++VISC YEDKT+WG  +GWIYGSVTED++TGF+MH  GWRS YC+ +  AF+GSAPINL+DRLHQVLRWA GSVEIF   + ++ ++  G   K L+R +Y+N
Sbjct:  634 GRPPGSLTGSRKPLDFATVNEAVNVISCWYEDKTEWGFNVGWIYGSVTEDVVTGFRMHEKGWRSFYCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFF--SRNNAIFA-GPKLKLLQRIAYLN 756          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.668e-32
Identity = 89/243 (36.63%), Postives = 121/243 (49.79%), Query Frame = 1
Query:   22 MKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTA-----SLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFT*QALSDMVWIWG-VD*KPLERFSYIN 732
            ++ LDG+QGPIYVGTGC+FRR  LYG++      PPR                                     A              K   +P  K  K +G+S  F  +  + +   P  A  A     + + EA+ V +  YE KT WG +IGW+YG+VTED++TG++MH  GWRS YC     AF G+APINL++RL QVLRW+ GS+EIF     S    ++G     PL+R +YIN
Sbjct:  485 LRALDGLQGPIYVGTGCLFRRITLYGFE------PPRINVGGPCFPRLGGMFAKNRYQKPGFEMTKPG------AKPVAPPPAATVAKGKHGFLPMPK--KAYGKSDAFADTIPRASHPSPYAAEAAVAADEAAIAEAVMVTAAAYEKKTGWGSDIGWVYGTVTEDVVTGYRMHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIF----FSRNNPLFGSTFLHPLQRVAYIN 709          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.226e-29
Identity = 78/241 (32.37%), Postives = 116/241 (48.13%), Query Frame = 1
Query:   22 MKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIASTL----KEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFT*QALSDMVWIWGVD*KPLERFSYIN 732
            M  L+G+QGP Y+GTG +FRR ALYG +      PPR                                                     +S +  +    KFG S  F+ + L    +E    P      S+  +   + +C YED T WG+++GW+Y   TED++TGF+MH  GWRSVY   +  AF+G+APINL++RL+Q+LRW+ GS+E+F   + + +    G    PL+R +Y+N
Sbjct:  470 MLSLNGLQGPSYLGTGTMFRRVALYGVE------PPRWGAA-------------------------------------------------ASQIKAMDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALLA---GRRLHPLQRVAYLN 652          
The following BLAST results are available for this feature:
BLAST of EY679620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLD4_ORYSJ1.138e-4142.31Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CSLD3_ARATH1.138e-4143.59Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLD2_ARATH4.323e-4143.16Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD3_ORYSJ9.631e-4143.19Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD4_ARATH2.540e-3368.48Cellulose synthase-like protein D4 OS=Arabidopsis ... [more]
CSLD5_ORYSJ4.333e-3351.06Cellulose synthase-like protein D5 OS=Oryza sativa... [more]
CSLD5_ORYSI4.333e-3351.06Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLD6_ARATH5.660e-3356.35Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLF6_ORYSJ3.668e-3236.63Probable mixed-linked glucan synthase 6 OS=Oryza s... [more]
CSLF2_ORYSJ2.226e-2932.37Mixed-linked glucan synthase 2 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-B12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679620 ID=EY679620; Name=EY679620; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGGTAGATAAACATGAAAGGATTGGACGGGATCCAGGGTCC
CATTTATGTTGGAACTGGGTGCGTCTTCAGGAGGCAGGCACTCTATGGAT
ACGATGCTCCCGTCAAGAAGAAACCTCCAAGGAAGACCTGTAACTGTTTG
CCAAAATGGTGTTGCTGTTGTTGCAGATCTAGAAAGAAGAGTAAGAAAGG
GAAGTCAAATAAGAAGAACAAGGACACTTCCAAGCAGATATATGCACTAG
AAAATATCGAGGAGGGAATTGAAGGTATAGATAATGAGAAATCATCCCTG
ATGCCCCAAATAAAATTTGAGAAAAAGTTTGGACAATCACCAGTTTTCAT
TGCGTCTACTTTGAAGGAAGCCGGTGGAGTTCCAACAGGAGCTTCAACCG
CATCACTCTTGAACGAAGCAATCCACGTTATCAGCTGCGGCTATGAGGAT
AAAACTGATTGGGGTAAAGAGATTGGATGGATTTATGGATCTGTTACAGA
GGATATATTAACAGGCTTTAAAATGCATTGCCATGGTTGGCGATCTGTGT
ATTGCATACCAAAAAGGCCAGCTTTCAAGGGTTCGGCTCCTATAAACCTC
TCAGATCGTCTACACCAGGTTCTTCGTTGGGCACTAGGATCTGTTGAGAT
TTTTACTTAACAGGCATTGTCCGATATGGTATGGATATGGGGTGTGGATT
GAAAACCACTGGAGCGCTTCTCGTATATAAACTCCGTTGGTTTATCCCAA
AACATCCATTCCCTTGATTCCAAAATTGTACCTTGCCTGGCTATCGGCCC
CCTTTACTGGGAAATTTCATTGTTCCCTGAAAATAACCAACCTATGCCCA
TTAATCCTTTTTCGGGGCCCTTTTTCTATACCTTAAGCTGCCACAGGGGA
TTTTTTTGAAAAGGGAAAGGGGGGGAGGGTTGTGGGCGTAA
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