EY679620

Overview
NameEY679620
Unique NameEY679620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.496e-17
Identity = 38/82 (46.34%), Postives = 55/82 (67.07%), Query Frame = 1
Query:  406 LLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            +L  A  V  C YE  T+WG +IG+ YGS+ ED  TGF +HC GWRS++C P + AF G +P  L+D + Q +RW++G +E+
Sbjct:  405 ILALAHDVAGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEV 486          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.552e-17
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 1
Query:  400 ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            +S +  A  V +C Y+  T WG+E+GW+YGS+TEDILTG ++H  GWRSV  + + PAF GSAPI     L Q  RWA G  EI
Sbjct:  436 SSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEI 519          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.552e-17
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 1
Query:  400 ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            +S +  A  V +C Y+  T WG+E+GW+YGS+TEDILTG ++H  GWRSV  + + PAF GSAPI     L Q  RWA G  EI
Sbjct:  436 SSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEI 519          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.400e-15
Identity = 51/117 (43.59%), Postives = 63/117 (53.85%), Query Frame = 1
Query:  307 QIKFE--KKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            Q KFE  ++  +S  +I S   +  G P     +S +  A  V SC YE  T WG E+GW YGS+TEDILTG ++H  GWRS     + PAF G AP      L Q  RWA G  EI
Sbjct:  437 QFKFESSEELKESARYIISG--DMSGEPI-VDISSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEI 550          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.829e-15
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  400 ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            +S ++ A  V +C YE  T WG+E+GW+YGS+TED+LTG ++H  GWRS     + PAF G AP      L Q+ RWA G +EI
Sbjct:  425 SSCVDVAKEVAACNYEIGTCWGQEVGWVYGSLTEDVLTGQRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWASGFLEI 508          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.075e-15
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 1
Query:  415 EAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            +A  +++C YE +T WG +IG  YG   EDI+TG  +HC GW S +  PKR AF G AP  L+  + Q  RW+ G++ IF
Sbjct:  422 KATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHCRGWESAFINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIF 501          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.322e-15
Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 1
Query:  298 LMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVIS-CGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            L+ +      FG S   + S ++     P   +  +   EA   +  C YE +T WGK IGW+Y S++ED+ T   +H  GW S Y  P  PAF GS P    + + Q  RWA GS+E+
Sbjct:  392 LLAEDSLSSGFGNSKEMVTSVVEALQRKPNPQNILTNSIEAAQEVGHCDYESQTSWGKTIGWLYDSMSEDMNTSIGIHSRGWTSSYIAPDPPAFLGSMPPGGLEAMIQQRRWATGSIEV 510          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.186e-14
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1
Query:  415 EAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            +A  + +C YE +T WG EIG  YG   ED++TG  +HC GW SVY  P+R AF G AP  L+  + Q  RW+ G+  IF
Sbjct:  417 KAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIF 496          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.022e-14
Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1
Query:  433 SCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            SC YE+ T WGKE+G  YG   ED++TG  + C GW+S Y  P++ AF G AP NL   L Q  RW+ G  +I
Sbjct:  420 SCTYEENTQWGKEMGVKYGCPVEDVITGLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQI 492          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.641e-14
Identity = 42/111 (37.84%), Postives = 56/111 (50.45%), Query Frame = 1
Query:  322 KKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVIS-CGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            ++FG S   + S +      P   +  +   EA   +  C YE +T WG  IGW+Y SV ED+ T   +H  GW S Y  P  PAF GS P  + + L Q  RWA G +EI
Sbjct:  401 RRFGNSKEMMKSVVDAIQRNPNPQNILTNSIEAAREVGHCQYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDTPAFLGSMPAGVPEALLQQRRWATGWIEI 511          
The following BLAST results are available for this feature:
BLAST of EY679620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLG2_ARATH1.496e-1746.34Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CSLH2_ORYSJ2.552e-1751.19Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLH2_ORYSI2.552e-1751.19Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLH3_ORYSJ1.400e-1543.59Putative cellulose synthase-like protein H3 OS=Ory... [more]
CSLH1_ORYSJ1.829e-1547.62Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CSLE1_ORYSJ4.075e-1545.00Cellulose synthase-like protein E1 OS=Oryza sativa... [more]
CSLB2_ARATH5.322e-1535.29Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]
CSLE6_ORYSJ1.186e-1446.25Cellulose synthase-like protein E6 OS=Oryza sativa... [more]
CSLE1_ARATH2.022e-1447.95Cellulose synthase-like protein E1 OS=Arabidopsis ... [more]
CSLB1_ARATH2.641e-1437.84Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-B12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679620 ID=EY679620; Name=EY679620; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGGTAGATAAACATGAAAGGATTGGACGGGATCCAGGGTCC
CATTTATGTTGGAACTGGGTGCGTCTTCAGGAGGCAGGCACTCTATGGAT
ACGATGCTCCCGTCAAGAAGAAACCTCCAAGGAAGACCTGTAACTGTTTG
CCAAAATGGTGTTGCTGTTGTTGCAGATCTAGAAAGAAGAGTAAGAAAGG
GAAGTCAAATAAGAAGAACAAGGACACTTCCAAGCAGATATATGCACTAG
AAAATATCGAGGAGGGAATTGAAGGTATAGATAATGAGAAATCATCCCTG
ATGCCCCAAATAAAATTTGAGAAAAAGTTTGGACAATCACCAGTTTTCAT
TGCGTCTACTTTGAAGGAAGCCGGTGGAGTTCCAACAGGAGCTTCAACCG
CATCACTCTTGAACGAAGCAATCCACGTTATCAGCTGCGGCTATGAGGAT
AAAACTGATTGGGGTAAAGAGATTGGATGGATTTATGGATCTGTTACAGA
GGATATATTAACAGGCTTTAAAATGCATTGCCATGGTTGGCGATCTGTGT
ATTGCATACCAAAAAGGCCAGCTTTCAAGGGTTCGGCTCCTATAAACCTC
TCAGATCGTCTACACCAGGTTCTTCGTTGGGCACTAGGATCTGTTGAGAT
TTTTACTTAACAGGCATTGTCCGATATGGTATGGATATGGGGTGTGGATT
GAAAACCACTGGAGCGCTTCTCGTATATAAACTCCGTTGGTTTATCCCAA
AACATCCATTCCCTTGATTCCAAAATTGTACCTTGCCTGGCTATCGGCCC
CCTTTACTGGGAAATTTCATTGTTCCCTGAAAATAACCAACCTATGCCCA
TTAATCCTTTTTCGGGGCCCTTTTTCTATACCTTAAGCTGCCACAGGGGA
TTTTTTTGAAAAGGGAAAGGGGGGGAGGGTTGTGGGCGTAA
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