EY679620

Overview
NameEY679620
Unique NameEY679620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.450e-14
Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 1
Query:  322 KKFGQSPVFIASTLKEAGGVPTGAST-ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            ++FG S   + S ++     P   +T A+ L  A  V  C +E +T WGK IGW+Y S  ED  T   +H  GW S Y  PK PAF G+ P    + + Q  RWA G +E+
Sbjct:  400 REFGNSNEMVTSVVEALQRKPNPQNTLANSLEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIGIHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEV 510          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.981e-13
Identity = 41/111 (36.94%), Postives = 54/111 (48.65%), Query Frame = 1
Query:  322 KKFGQSPVFIASTLKEAGGVP-TGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            ++FG S   + S +      P    +    L  A  +  C YE +T WGK IGW+Y S TED+ T   +H  GW S Y  P  PAF G  P    + + Q  RWA G +EI
Sbjct:  400 REFGNSKEMVKSVVDALQRKPFPQKNLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEI 510          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.229e-12
Identity = 37/86 (43.02%), Postives = 49/86 (56.98%), Query Frame = 1
Query:  394 STASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            S A+L+  A  V  C YE +T WG  +GW+Y SV EDI T   +H  GW S +  P  PAF GS P    + + Q  RWA G++E+
Sbjct:  425 SLANLIEAAQEVGHCHYEYQTSWGN-LGWMYDSVAEDINTSVGIHLRGWTSSFISPDPPAFIGSTPTLGLEAIVQQRRWATGAIEV 509          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.217e-12
Identity = 37/86 (43.02%), Postives = 48/86 (55.81%), Query Frame = 1
Query:  394 STASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            S A+L+  A  V  C YE +T WG  +GW+Y SV ED  T   +H  GW S +  P  PAF GS P    + + Q  RWA GS+E+
Sbjct:  425 SLANLVEAAQEVGHCHYEYQTSWGN-LGWLYDSVAEDTNTSIGIHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWATGSIEV 509          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.093e-11
Identity = 33/75 (44.00%), Postives = 42/75 (56.00%), Query Frame = 1
Query:  427 VISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 651
            +++C YE  T WG E G  YG   ED+ TG ++ C GWRSVY  PKR  F G  P +L   L    RW  G ++I
Sbjct:  433 LVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQI 507          
The following BLAST results are available for this feature:
BLAST of EY679620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLB3_ARATH3.450e-1437.84Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLB4_ARATH4.981e-1336.94Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB5_ARATH3.229e-1243.02Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CSLB6_ARATH4.217e-1243.02Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLE2_ORYSJ2.093e-1144.00Cellulose synthase-like protein E2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-B12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679620 ID=EY679620; Name=EY679620; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGGTAGATAAACATGAAAGGATTGGACGGGATCCAGGGTCC
CATTTATGTTGGAACTGGGTGCGTCTTCAGGAGGCAGGCACTCTATGGAT
ACGATGCTCCCGTCAAGAAGAAACCTCCAAGGAAGACCTGTAACTGTTTG
CCAAAATGGTGTTGCTGTTGTTGCAGATCTAGAAAGAAGAGTAAGAAAGG
GAAGTCAAATAAGAAGAACAAGGACACTTCCAAGCAGATATATGCACTAG
AAAATATCGAGGAGGGAATTGAAGGTATAGATAATGAGAAATCATCCCTG
ATGCCCCAAATAAAATTTGAGAAAAAGTTTGGACAATCACCAGTTTTCAT
TGCGTCTACTTTGAAGGAAGCCGGTGGAGTTCCAACAGGAGCTTCAACCG
CATCACTCTTGAACGAAGCAATCCACGTTATCAGCTGCGGCTATGAGGAT
AAAACTGATTGGGGTAAAGAGATTGGATGGATTTATGGATCTGTTACAGA
GGATATATTAACAGGCTTTAAAATGCATTGCCATGGTTGGCGATCTGTGT
ATTGCATACCAAAAAGGCCAGCTTTCAAGGGTTCGGCTCCTATAAACCTC
TCAGATCGTCTACACCAGGTTCTTCGTTGGGCACTAGGATCTGTTGAGAT
TTTTACTTAACAGGCATTGTCCGATATGGTATGGATATGGGGTGTGGATT
GAAAACCACTGGAGCGCTTCTCGTATATAAACTCCGTTGGTTTATCCCAA
AACATCCATTCCCTTGATTCCAAAATTGTACCTTGCCTGGCTATCGGCCC
CCTTTACTGGGAAATTTCATTGTTCCCTGAAAATAACCAACCTATGCCCA
TTAATCCTTTTTCGGGGCCCTTTTTCTATACCTTAAGCTGCCACAGGGGA
TTTTTTTGAAAAGGGAAAGGGGGGGAGGGTTGTGGGCGTAA
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