EY679615
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_PELPB (10 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.796e-19 Identity = 46/93 (49.46%), Postives = 65/93 (69.89%), Query Frame = 3 Query: 297 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 572 ++KPL DRV+VK EEKT GG+++P + KPQ GEVVAVG GK + L++ VK G++V+Y KY+GTE+ G ++LI+RE D+ IL Sbjct: 2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_DESDA (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.796e-19 Identity = 44/93 (47.31%), Postives = 68/93 (73.12%), Query Frame = 3 Query: 300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 575 +KPL DRVLVK EEKT GG+++P A+ KP G+VVAVG GK + ++VK G +V+++KYAGTE++ +G +HL++RE+D++ I++ Sbjct: 3 LKPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGKVGDNGERTALAVKAGDEVLFNKYAGTEVKLDGVDHLVMREEDILAIID 95
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_CLOTH (10 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groS PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.796e-19 Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 297 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 575 +I+PLGDRV+VK+ EE T GI LP +A+ KPQ EVVAVG G V ++ + VK G +VI SKYAGTE++F+G + I+R++D++ ++E Sbjct: 2 NIRPLGDRVVVKMVETEETTKSGIVLPGSAKEKPQVAEVVAVGPGTVVDGKEVKMEVKVGDKVIISKYAGTEVKFDGQEYTILRQNDILAVVE 94
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_GEOSL (10 kDa chaperonin OS=Geobacter sulfurreducens GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.652e-19 Identity = 45/94 (47.87%), Postives = 66/94 (70.21%), Query Frame = 3 Query: 297 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 575 +++PL DR+LVK E KT GGIF+P A+ KPQ GE+VAVG GK K + + +K G +V++ KYAGT+++ G LI+REDD++G++E Sbjct: 2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIKIEGQEFLIMREDDILGVIE 95
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_GEOSF (10 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.652e-19 Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 575 ++P+ DR++VK E KT GGI++P A+ KPQ GEVVAVG GK K L + VK G +V++ KY+GTE++ G ++LI+REDD++G++E Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVKVEGQDYLIMREDDILGVIE 95
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_SYNP2 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.770e-19 Identity = 46/91 (50.55%), Postives = 68/91 (74.73%), Query Frame = 3 Query: 294 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 563 +++KPLGDRV VK+ EEKT GGI LP +A+ KPQ GEVVAVGEGK ++ + VK G +V+YSKYAGT+++ +G +++++ E D++ Sbjct: 9 STLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLSGDDYVLLSEKDIL 99 HSP 2 Score: 73.9442 bits (180), Expect = 1.486e-12 Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 3 Query: 585 IKDLKPLNDRVFIKVAEAEETTAGSLLLTEGKQEKPFIGTVFAVGTGPLNEEGIRKPLSFAPGNPGMFSKLAG 803 + LKPL DRVF+KV+E+EE TAG +LL + +EKP IG V AVG G N++G R + G+ ++SK AG Sbjct: 8 VSTLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAG 80
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_MYXXD (10 kDa chaperonin OS=Myxococcus xanthus (strain DK 1622) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.770e-19 Identity = 44/93 (47.31%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 575 I+PL DR++VK E KT GG+F+P A+ KP G+V+AVG GK K+ + +K G +++SKYAGTE++ +G HLI+RE+DV+G++E Sbjct: 3 IRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIKLDGEEHLILREEDVLGVIE 95
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_CYAA5 (10 kDa chaperonin OS=Cyanothece sp. (strain ATCC 51142) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.770e-19 Identity = 45/91 (49.45%), Postives = 67/91 (73.63%), Query Frame = 3 Query: 294 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 563 +++KPLGDR+ VK+ EEKT GGI LP AQ KPQ GEVVAVG GK ++ ++ VK G +V+YSKYAGT+++ +G +++++ E D++ Sbjct: 9 STVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVKLSGEDYVLLSEKDIL 99 HSP 2 Score: 73.9442 bits (180), Expect = 1.486e-12 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 3 Query: 585 IKDLKPLNDRVFIKVAEAEETTAGSLLLTEGKQEKPFIGTVFAVGTGPLNEEGIRKPLSFAPGNPGMFSKLAG 803 + +KPL DR+F+KV+ AEE TAG +LL + QEKP IG V AVG G N++G R L G+ ++SK AG Sbjct: 8 VSTVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAG 80
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_CHLP8 (10 kDa chaperonin OS=Chlorobaculum parvum (strain NCIB 8327) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.770e-19 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 297 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 572 ++KPL DRV+VK EEKT GG+++P + KPQ GEVVAVGEGK +L + VK G +V+Y KY+GTE++ ++LI+RE D+ IL Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGEGKVADNGQLVQMQVKVGDKVLYGKYSGTEVQVEAEDYLIMRESDIFAIL 94
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_OCEIH (10 kDa chaperonin OS=Oceanobacillus iheyensis GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.230e-19 Identity = 43/91 (47.25%), Postives = 66/91 (72.53%), Query Frame = 3 Query: 300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 572 IKPLGDRV++++ EE T GI LP +A+ KPQ G+VVAVG G+ K+ + V G ++I+SK+AGTE+++ G +LI+RE+D++ I+ Sbjct: 2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRVENGEKIALEVSEGDRIIFSKFAGTEVKYEGTEYLILRENDILAII 92 The following BLAST results are available for this feature:
BLAST of EY679615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 487
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679615 ID=EY679615; Name=EY679615; organism=Citrus sinensis; type=EST; length=958bpback to top |