EY679610

Overview
NameEY679610
Unique NameEY679610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.964e-57
Identity = 103/137 (75.18%), Postives = 123/137 (89.78%), Query Frame = 2
Query:  161 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 571
            AN++SGMAV D+CKLKF+ELKAKR +RFIVFKIEEK +QV VE+LG+P ++Y+DF   LP  ECRYAV+D+DFVT ENCQKS+IFFI+WSPDT+RVRSKM+YAS+KDRFKRELDGIQVELQATDPSEM +D+ K RA
Sbjct:    2 ANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIKARA 138          
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.964e-57
Identity = 105/137 (76.64%), Postives = 122/137 (89.05%), Query Frame = 2
Query:  161 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 571
            ANAASGMAV D+CKLKFLELK+KR YRFI+F+I+ +Q  V+VEKLG P +TY+DF ASLPA ECRYAV+D+DF+T ENCQKS+IFFIAWSPD++RVR KM+YASSKDRFKRELDGIQVELQATDPSEM  D+ K RA
Sbjct:    2 ANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQ--VVVEKLGNPDETYDDFTASLPANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 136          
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 5.964e-57
Identity = 102/137 (74.45%), Postives = 125/137 (91.24%), Query Frame = 2
Query:  161 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 571
            AN+ASGMAV D+CKLKF ELK+KR++RFI FKI+E+ +QV+V++LG+P  TY+DF AS+PA ECRYAV+D+DFVT ENCQKS+IFFI+WSPDT++VRSKM+YASSKDRFKRELDGIQVELQATDPSEM +D+ K RA
Sbjct:    2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKARA 138          
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 7.291e-55
Identity = 104/137 (75.91%), Postives = 118/137 (86.13%), Query Frame = 2
Query:  161 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 571
            ANAASGMAV D+CKLKFLELKAKR YRFI+F+I+ +Q  V+VEKLG P + Y+DF   LP  ECRYAVYD+DF TAEN QKS+IFFIAWSPD++RVR KM+YASSKDRFKRELDGIQVELQATDPSEM LD+ K RA
Sbjct:    2 ANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQ--VVVEKLGSPQENYDDFTNYLPPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKSRA 136          
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF9_ORYSJ (Actin-depolymerizing factor 9 OS=Oryza sativa subsp. japonica GN=ADF9 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.796e-53
Identity = 97/138 (70.29%), Postives = 120/138 (86.96%), Query Frame = 2
Query:  161 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 574
            AN+ASG+AV+D+CK KF ELK +R +RFIVFKI++K  ++ VE+LG+  + YEDFAA+LPA+ECRYAVYD DFVT ENCQKS+IFF +WSPDTAR RSKM+YASSKDRF+RELDGIQ E+QATDPSEM LD+ + RA+
Sbjct:    2 ANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLPADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRARAH 139          
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF2_MAIZE (Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.001e-53
Identity = 94/138 (68.12%), Postives = 118/138 (85.51%), Query Frame = 2
Query:  161 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 574
            AN++SG+AV D+CK+KF +LKA+R++RFIVF+I++K  ++ V++LGEP Q Y DF  SLPA+ECRYA+YD DF T ENCQKS+IFF +WSPDTAR RSKM+YASSKDRF+RELDGIQ E+QATDPSEM LD+ K R N
Sbjct:    2 ANSSSGLAVSDECKVKFRDLKARRSFRFIVFRIDDKDMEIKVDRLGEPNQGYGDFTDSLPADECRYAIYDLDFTTVENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVKSRTN 139          
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF1_MAIZE (Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.986e-52
Identity = 93/138 (67.39%), Postives = 117/138 (84.78%), Query Frame = 2
Query:  161 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 574
            AN++SG+AV+D+CK+KF ELK++RT+RFIVF+I++   ++ V++LGEP Q Y DF  SLPA ECRYA+YD DF T ENCQKS+IFF +WSPDTAR RSKM+YASSKDRF+RELDGIQ E+QATDPSEM LD+ + R N
Sbjct:    2 ANSSSGLAVNDECKVKFRELKSRRTFRFIVFRIDDTDMEIKVDRLGEPNQGYGDFTDSLPANECRYAIYDLDFTTIENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVRSRTN 139          
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 7.062e-50
Identity = 95/127 (74.80%), Postives = 112/127 (88.19%), Query Frame = 2
Query:  191 DDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 571
            D+CKLKFLELK KR +RFI+F+I+ +Q  V+VEKLG P +TY+DF ASLPA+ECRYAV+D+DF T ENCQKS+IFFIAWSPD++RVR KM+YASSKDRFKRELDGIQVELQATDPSEM  D+ K RA
Sbjct:    2 DNCKLKFLELK-KRIFRFIIFRIDGQQ--VVVEKLGNPQETYDDFTASLPADECRYAVFDFDFTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 125          
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.684e-49
Identity = 85/137 (62.04%), Postives = 120/137 (87.59%), Query Frame = 2
Query:  164 NAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 574
            NA+SGM V D  K  FLELK K+ +R+++FKI+EK+K+V+VEK G P +++++FAA+LP  +CRYAVYD+DFVT+ENCQKS+IFFIAWSPD++R+R+KM+YA+SK+RF+RELDG+  E+QATDP+EM L+V ++RA+
Sbjct:    7 NASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERAH 143          
BLAST of EY679610 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 8.633e-48
Identity = 84/141 (59.57%), Postives = 117/141 (82.98%), Query Frame = 2
Query:  152 MSKANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 574
            +S+ NA SGM V D+ K  FLEL+ K+T+R++VFKI+E +K+V+VEK G PT++Y+DF ASLP  +CRYAVYD+DFVT+ENCQKS+IFF AWSP T+ +R+K++Y++SKD+  REL GI  E+QATDP+E+ L+V ++RAN
Sbjct:    6 LSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146          
The following BLAST results are available for this feature:
BLAST of EY679610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ADF_LILLO5.964e-5775.18Actin-depolymerizing factor OS=Lilium longiflorum ... [more]
ADF7_ARATH5.964e-5776.64Actin-depolymerizing factor 7 OS=Arabidopsis thali... [more]
ADF6_ORYSJ5.964e-5774.45Actin-depolymerizing factor 6 OS=Oryza sativa subs... [more]
ADF12_ARATH7.291e-5575.91Actin-depolymerizing factor 12 OS=Arabidopsis thal... [more]
ADF9_ORYSJ1.796e-5370.29Actin-depolymerizing factor 9 OS=Oryza sativa subs... [more]
ADF2_MAIZE4.001e-5368.12Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 ... [more]
ADF1_MAIZE1.986e-5267.39Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 ... [more]
ADF_BRANA7.062e-5074.80Actin-depolymerizing factor (Fragment) OS=Brassica... [more]
ADF_VITVI2.684e-4962.04Actin-depolymerizing factor OS=Vitis vinifera PE=2... [more]
ADF6_ARATH8.633e-4859.57Actin-depolymerizing factor 6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-B02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679610 ID=EY679610; Name=EY679610; organism=Citrus sinensis; type=EST; length=977bp
CCACGCGTCCGAAAAACTTTCCTTCACCTTGCAAAATTTCTCTGTACTTT
GCTTCTTAGATCTTGATCCTAGAAACCATGATTGTGATCTTAGTAGCCCT
GATAATGAGCTGAATGCCTTTGACTTATTTATGAATGAAGATGGAATCAC
AATGAGCAAGGCTAATGCTGCTTCTGGGATGGCTGTACATGATGACTGTA
AGCTAAAGTTCTTGGAGTTGAAAGCCAAGAGAACCTACCGCTTCATAGTA
TTTAAGATTGAGGAGAAGCAGAAGCAGGTCATTGTGGAAAAACTTGGTGA
GCCAACTCAAACCTATGAAGATTTTGCTGCCAGCCTTCCTGCTGAGGAGT
GCCGATATGCTGTGTATGATTATGATTTTGTTACCGCAGAGAACTGCCAA
AAAAGCAGGATTTTCTTCATTGCATGGTCTCCCGACACTGCAAGAGTAAG
AAGCAAGATGATTTATGCAAGCTCCAAGGACAGGTTCAAGAGAGAGCTAG
ATGGCATTCAAGTGGAGCTGCAGGCAACTGATCCATCTGAGATGGGTCTT
GACGTATTTAAAGACCGTGCCAACTAAATAAAGGCTCCTGATCTCACCAA
TTGAGATTGTTTTTTATCTTTTTGTGCTTTACCTAAAGGTGAAATGTTAA
TAATTTGTGGCGGGCAGCTTGAATCCTAACTGAATTAGGAAAATTGGTTT
GTTGTTCAAGTTTCCACCGATGCCAGTATTTCCGTCCTAAACCTTTTCAG
TGGTCCTTATGATGTCCTTTATTGAATTGTTTTGGGGGGGGAAGTTATGG
GGATGGATGGGTCACTTTAAACCTTTTTTCTTTCAACCCAAGGGGGTTTT
ATTTTTAGGGGGGGGAAGGAAAAACCCCCCGGTTTAGGGTTTTTTTTTAA
CTTTGGAAAAAGTGGGAGGTTTTCCTTTTTTGAAATTTTTAAAAAAGGGA
GAGTGTTTTTCTTTTTTTTTCTCTTGG
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