EY679609

Overview
NameEY679609
Unique NameEY679609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_MICAN (Cytochrome b6-f complex iron-sulfur subunit OS=Microcystis aeruginosa (strain NIES-843) GN=petC PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.412e-35
Identity = 71/133 (53.38%), Postives = 89/133 (66.92%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VPD+G+RQ MNLL  G ++      L P   +F PP  G  GGG TAKDA+GND+I + +L +H  GDRTL +GLKGDPTYLVV++DKTLA  +        LGCVVPWN+ +++F  PC G QYN  G VVR
Sbjct:    9 VPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQFLTSHNAGDRTLAQGLKGDPTYLVVQEDKTLA-NYGINAVCTHLGCVVPWNASEEKFMCPCHGSQYNAEGKVVR 140          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRIA_CHLRE (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Chlamydomonas reinhardtii GN=petC PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.526e-35
Identity = 74/160 (46.25%), Postives = 96/160 (60.00%), Query Frame = 2
Query:   77 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            PA+   + ++ +   ++  A S     VPDM KR +MNL+L G   LP   + + Y  FF PP  G  GGG  AKDA+GNDI A +WL TH  GDR+L++GLKGDPTYL+V  D T+  K+        LGCVVPW + + +F  PC G QYN  G VVR
Sbjct:   12 PAKASAIRRSRVMPVVRAAAAS---SEVPDMNKRNIMNLILAGGAGLPITTLALGYGAFFVPPSSGGGGGGQAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYLIVTADSTIE-KYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVR 167          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRIA_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle OS=Cyanophora paradoxa GN=petC-1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.190e-34
Identity = 83/177 (46.89%), Postives = 107/177 (60.45%), Query Frame = 2
Query:   29 SRKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            S++ G F P  A   KPA+    +       + C A S   D VPDMGKR+LMNLLLLGA++ P      P+ +F  PP  G  AG G  AKDA+GND+  + WL TH PGDR+L +GLKGD TYL+V++D TL   +        LGCVVPWN+ + +F  PC G QY++ G VVR
Sbjct:   36 SKQVGSFKPVFA-AAKPAKETTFS-------VSCSAAS---DDVPDMGKRKLMNLLLLGAIAGPVAGAGGPFVSFLVPPKAGGGAGAGQAAKDALGNDVKVSSWLETHKPGDRSLAQGLKGDATYLIVKEDGTLE-NYGLNAVCTHLGCVVPWNASENKFMCPCHGSQYDRTGKVVR 200          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRIB_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle OS=Cyanophora paradoxa GN=petC-2 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33
Identity = 78/146 (53.42%), Postives = 93/146 (63.70%), Query Frame = 2
Query:  122 IKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            I C A S   D VPDMGKR+LMNLLLLGA++ PT     P+ +F  PP  G  AG G  AKDA GNDI    WL T  PGDR+L +GLKGD TYL+V++D TL  K+        LGCVVPWN  + +F  PC G QY++ G VVR
Sbjct:   61 ISCSAAS---DEVPDMGKRKLMNLLLLGAIAGPTIGAGGPFVSFLVPPKSGGGAGAGQAAKDAAGNDIKVEKWLETXKPGDRSLAQGLKGDATYLIVKEDGTLE-KYGLNAVCTHLGCVVPWNQSEGKFMCPCHGSQYDRTGKVVR 202          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP2 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petC PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.017e-31
Identity = 68/133 (51.13%), Postives = 88/133 (66.17%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VPD+G+RQ +NLL +G  +      L P   +F PP  G AGGG  AKDA+GNDII +D+L TH  GDR+L +GLKGDPTY+VVE D T++  +        LGCVVPWN+ + +F  PC G QY++ G VVR
Sbjct:   10 VPDLGRRQFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGAGGGVIAKDALGNDIIVSDYLQTHTAGDRSLAQGLKGDPTYVVVEGDNTIS-SYGINAICTHLGCVVPWNTAENKFMCPCHGSQYDETGKVVR 141          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_TRIEI (Cytochrome b6-f complex iron-sulfur subunit OS=Trichodesmium erythraeum (strain IMS101) GN=petC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.329e-31
Identity = 68/133 (51.13%), Postives = 87/133 (65.41%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VP MG+RQ MNLL  G V+      L P   +F PP  G +GGG TAKDA+GNDII +++L  H  G+RTL +GLKGDPTY+V+E ++TLA ++        LGCVVPWN  + +F  PC G QY+  G VVR
Sbjct:   10 VPSMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPSSGGSGGGVTAKDALGNDIIVSEFLANHNSGERTLAQGLKGDPTYVVIEGEQTLA-EYGLNAVCTHLGCVVPWNGSENKFICPCHGSQYDNTGKVVR 141          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPW (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH7803) GN=petC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.329e-31
Identity = 69/140 (49.29%), Postives = 87/140 (62.14%), Query Frame = 2
Query:  137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            T +PA  VP MG+RQ MNLL  G+V+      L P   +F PP    +GGGT+AKD +GN + A+ WL+TH  GDR+L +GLKGDPTYL+VE D  +   +        LGCVVPWNS   +F  PC G QY+  G VVR
Sbjct:    2 TQMPAGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGSGGGTSAKDELGNAVTASGWLSTHPAGDRSLVQGLKGDPTYLIVEGDDAIG-SYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVR 140          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNS9 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9902) GN=petC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.266e-31
Identity = 70/140 (50.00%), Postives = 86/140 (61.43%), Query Frame = 2
Query:  137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            T IP+  VP MG+RQ MNLL  G+V+      L P A +F PP    +GGGTTAKD +GN + A  WL+TH  GDR+L +GLKGDPTYL+VE    +   +        LGCVVPWNS   +F  PC G QY+  G VVR
Sbjct:    2 TQIPSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVARYFIPPKAAGSGGGTTAKDELGNVVTATGWLSTHPEGDRSLVQGLKGDPTYLIVEGADAIG-SYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVR 140          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRIA_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.960e-31
Identity = 67/133 (50.38%), Postives = 84/133 (63.16%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VPDMG+RQ MNLL  G V+      L P   +F PP  G AGGGTTAKD +GND+  + +L +H  GDRTL +GLKGDPTY+VVE  + +   +        LGCVVPWN+ + +F  PC G QY+  G VVR
Sbjct:   10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAIT-DYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVR 141          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRIA_ANASP (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=petC1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.960e-31
Identity = 67/133 (50.38%), Postives = 84/133 (63.16%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VPDMG+RQ MNLL  G V+      L P   +F PP  G AGGGTTAKD +GND+  + +L +H  GDRTL +GLKGDPTY+VVE  + +   +        LGCVVPWN+ + +F  PC G QY+  G VVR
Sbjct:   10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAIT-DYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVR 141          
The following BLAST results are available for this feature:
BLAST of EY679609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
UCRI_MICAN4.412e-3553.38Cytochrome b6-f complex iron-sulfur subunit OS=Mic... [more]
UCRIA_CHLRE7.526e-3546.25Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_CYAPA2.190e-3446.89Cytochrome b6-f complex iron-sulfur subunit 1, cya... [more]
UCRIB_CYAPA4.130e-3353.42Cytochrome b6-f complex iron-sulfur subunit 2, cya... [more]
UCRI_SYNP21.017e-3151.13Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRI_TRIEI1.329e-3151.13Cytochrome b6-f complex iron-sulfur subunit OS=Tri... [more]
UCRI_SYNPW1.329e-3149.29Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRI_SYNS92.266e-3150.00Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRIA_ANAVT2.960e-3150.38Cytochrome b6-f complex iron-sulfur subunit 1 OS=A... [more]
UCRIA_ANASP2.960e-3150.38Cytochrome b6-f complex iron-sulfur subunit 1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-B01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679609 ID=EY679609; Name=EY679609; organism=Citrus sinensis; type=EST; length=909bp
CCACGCGTCCGCTCCTTCTCAGCTATGCTCACGCAAGGGTGGTATGTTCT
GTCCATCAAGAGCTTTTCTTGTGAAACCAGCAAGGACCCAGATGGTGACA
AAGAATCCAATGGGAATGAAGATCAAGTGCCAGGCTACAAGTATTCCAGC
TGATAGAGTGCCTGATATGGGCAAGAGGCAGCTCATGAATTTGCTTCTCT
TGGGTGCTGTTTCTCTTCCCACTGGATTTATGTTGGTTCCTTATGCGACC
TTCTTTGCCCCACCTGGTTTAGGAAGTGCTGGTGGTGGTACTACTGCCAA
GGATGCCATTGGCAATGACATCATTGCCGCTGATTGGCTTAACACGCACG
GCCCTGGGGACCGAACCCTCACCGAAGGATTGAAGGGAGATCCCACCTAC
CTTGTTGTGGAACAAGACAAAACACTTGCCATCAAATGGAAATCAATGCT
GTCTGCACTCACCTTGGGATGTGTGGTGCCATGGAATTCCCCCAAAAAAA
GATTCAACTAACCCTGCACCGGATGCCAATACAATAAACATGGAACAGTT
GTGAGAAGGAACTGCACAATGTGACATGCGGATAGGACCATGACACACTC
TGAAATGAGTAAGGCAACTCACCATACACTAGACGGCAAACAATTACAGG
AATGCGAGAACCCCCAAGGCGGCGCAGAAACCCGGACACAGGGGCCTGGG
AAGAACGACAGACAAAAGACCGACCGCCGACAAGGAAAAATCAAAGCCGG
GCGGGAAAAAGAAAAAGGACGAGAGCAGCAAACACGGACAAGCATAACCC
AGATAATGAAGGCATCGATGAGCCACCGAAGCTCCACAGAAGAAAACCAC
CACCAACAGGACNCGAAAGAAACGACAAATAATACGAACTCATAAAGAGA
CGGGCAAGA
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