EY679609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNS3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9311) GN=petC PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.048e-31 Identity = 68/140 (48.57%), Postives = 86/140 (61.43%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T +PA VP MG+RQ MNLL G+V+ L P A +F PP GGGT+AKD +GN + A+ WL++H GDR+L +GLKGDPTYL+VE + + LGCVVPWNS +F PC G QY+ G VVR Sbjct: 2 TQMPASDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPRAAGGGGGTSAKDELGNSVTASGWLSSHAEGDRSLVQGLKGDPTYLIVEGVDAIG-SYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRIB_SYNY3 (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Synechocystis sp. (strain PCC 6803) GN=petC2 PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 5.048e-31 Identity = 65/133 (48.87%), Postives = 84/133 (63.16%), Query Frame = 2 Query: 158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 VPD+G+RQ MNLL G ++ L P + PP G +GGG TAKDA+GND+ ++L +H GDR L +GLKGDPTY+VV+ D T+A + LGCVVPWN+ + +F PC G QYN G VVR Sbjct: 10 VPDLGRRQFMNLLTFGTITGVAAGALYPAVKYLIPPSSGGSGGGVTAKDALGNDVKVTEFLASHNAGDRVLAQGLKGDPTYIVVQGDDTIA-NYGINAVCTHLGCVVPWNASENKFMCPCHGSQYNAEGKVVR 141
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNSC (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9605) GN=petC PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.918e-30 Identity = 67/140 (47.86%), Postives = 87/140 (62.14%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T + + VP MG+RQ MNLL G+V+ L P A +F PP +GGGT+AKD +GN I A+ WL++H GDR+L +GLKGDPTYL+VE + + + LGCVVPWNS +F PC G QY+ G VVR Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPKAAGSGGGTSAKDELGNPITASGWLSSHPEGDRSLVQGLKGDPTYLIVEGEDAIG-SYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDSTGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROMM (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9313) GN=petC PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.505e-30 Identity = 67/140 (47.86%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN + A+ WL H GDR+L +GLKGDPTYL+VE D + + LGCVVPWNS +F PC G QYN G VVR Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIG-SYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROM3 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9303) GN=petC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.505e-30 Identity = 67/140 (47.86%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN + A+ WL H GDR+L +GLKGDPTYL+VE D + + LGCVVPWNS +F PC G QYN G VVR Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIG-SYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNR3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain RCC307) GN=petC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.272e-30 Identity = 68/140 (48.57%), Postives = 85/140 (60.71%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T I A VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GND+ A+ WL H GDR+L +GLKGDPTYL+V+ ++ + LGCVVPWN+ +F PC G QY+ G VVR Sbjct: 2 TQISAKDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKASGAGGGTTAKDELGNDVTASGWLADHKEGDRSLVQGLKGDPTYLIVDGPDSIG-DYGINAICTHLGCVVPWNAGANKFMCPCHGSQYDATGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP6 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.272e-30 Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = 2 Query: 149 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++ + +L H GDRTL +GLKGDPTYLVVE + + + LGCVVPWN+ + +F PC G QY+ G VVR Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIG-DYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVR 141
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNE7 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus (strain PCC 7942) GN=petC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.272e-30 Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = 2 Query: 149 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++ + +L H GDRTL +GLKGDPTYLVVE + + + LGCVVPWN+ + +F PC G QY+ G VVR Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIG-DYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVR 141
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPX (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH8102) GN=petC PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.274e-30 Identity = 68/140 (48.57%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T + + VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GN I A WL++H GDR+L +GLKGDPTYL+VE + + LGCVVPWNS +F PC G QY+ G VVR Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGAGGGTTAKDELGNAITATGWLSSHPEGDRSLVQGLKGDPTYLIVEGPDAIG-SYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_NOSSP (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc sp. (strain PCC 7906) GN=petC PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.290e-30 Identity = 69/134 (51.49%), Postives = 85/134 (63.43%), Query Frame = 2 Query: 158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALT-LGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +L GDR L +GLKGDPTY+VVE + AIK + + T LGCVVPWN + +F PC G QY++ G VVR Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPASGGAGGGTTAKDELGNDVSLSKFLENRNAGDRALVQGLKGDPTYIVVENKQ--AIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVR 141 The following BLAST results are available for this feature:
BLAST of EY679609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679609 ID=EY679609; Name=EY679609; organism=Citrus sinensis; type=EST; length=909bpback to top |