EY679609

Overview
NameEY679609
Unique NameEY679609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_NOSP7 (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=petC PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.521e-30
Identity = 69/134 (51.49%), Postives = 83/134 (61.94%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALT-LGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VPDMG+RQ MNLL  G V+      L P   +F PP  G AGGGTTAKD +GND+    +L     GDR L +GLKGDPTY+VV  D   AIK   + +  T LGCVVPWN  + +F  PC G QY++ G VVR
Sbjct:   10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVTKFLENRNAGDRNLVQGLKGDPTYIVV--DSKEAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVR 141          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_MASLA (Cytochrome b6-f complex iron-sulfur subunit OS=Mastigocladus laminosus GN=petC PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.521e-30
Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALT-LGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VPDMG+RQ MNLL  G V+      L P   +F PP  G+ GGGTTAKD +GN++  + +L +H  GDR L +GLKGDPTY+VVE  +  AI+   + +  T LGCVVPWN+ + +F  PC G QY++ G V+R
Sbjct:   10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKFLESHNAGDRVLVQGLKGDPTYIVVESKE--AIRDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDETGKVIR 141          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_THEEB (Cytochrome b6-f complex iron-sulfur subunit OS=Thermosynechococcus elongatus (strain BP-1) GN=petC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.243e-29
Identity = 64/133 (48.12%), Postives = 83/133 (62.41%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VPDMG+RQ MNLL  G ++      L P   +F PP  G  GGG  AKDA+GNDI  +++L  H PGDR+L +G+KGDPTY++V +D  +A  +        LGCVVPWN  + +F  PC G QY+  G VVR
Sbjct:   10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIA-NYGLNAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVR 141          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNEL (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus GN=petC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.243e-29
Identity = 64/133 (48.12%), Postives = 83/133 (62.41%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VPDMG+RQ MNLL  G ++      L P   +F PP  G  GGG  AKDA+GNDI  +++L  H PGDR+L +G+KGDPTY++V +D  +A  +        LGCVVPWN  + +F  PC G QY+  G VVR
Sbjct:   10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIA-NYGLNAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVR 141          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_CYAP4 (Cytochrome b6-f complex iron-sulfur subunit OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=petC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.243e-29
Identity = 66/133 (49.62%), Postives = 81/133 (60.90%), Query Frame = 2
Query:  158 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            VPDMG+RQ MNLL  G+ +     ML P   +F PP  G  GGG  AKDA+GNDI  +D+L  H   DR L +GLKGDPTY+VV+ D T+   +        LGCVVPWN  + +F  PC G QY+  G VVR
Sbjct:   10 VPDMGRRQFMNLLTFGSATGVALGMLYPVVRYFIPPASGGVGGGVVAKDALGNDISVSDFLAKHPANDRALAQGLKGDPTYIVVQDDHTIG-DYGLNAVCTHLGCVVPWNISENKFICPCHGSQYDNTGKVVR 141          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROMT (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL2A) GN=petC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.770e-29
Identity = 66/140 (47.14%), Postives = 84/140 (60.00%), Query Frame = 2
Query:  137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            T +    VP MG+RQ MNLL  G V+      L P A +F P   G  GGGT AKD +GN++ A+ WL+TH  GDR+L +GLKGDPTYL+VE +  +   +        LGCVVPWNS   ++  PC G QY+  G VVR
Sbjct:    2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAIT-SYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVR 140          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROM1 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL1A) GN=petC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.770e-29
Identity = 66/140 (47.14%), Postives = 84/140 (60.00%), Query Frame = 2
Query:  137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            T +    VP MG+RQ MNLL  G V+      L P A +F P   G  GGGT AKD +GN++ A+ WL+TH  GDR+L +GLKGDPTYL+VE +  +   +        LGCVVPWNS   ++  PC G QY+  G VVR
Sbjct:    2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAIT-SYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVR 140          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROM4 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9211) GN=petC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.375e-28
Identity = 66/137 (48.18%), Postives = 84/137 (61.31%), Query Frame = 2
Query:  146 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            P+D VP MG+RQ MNLL  G  +      L P A +F P   G  GGGT+AKD +GN I A+ WL+ H  GDR+L +GLKGDPTYL+VE  + +   +        LGCVVPWNS   ++  PC G QY+ +G VVR
Sbjct:    6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITASGWLSNHPAGDRSLVQGLKGDPTYLIVEGSEAIG-NFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVR 140          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROMA (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus GN=petC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.063e-28
Identity = 66/137 (48.18%), Postives = 82/137 (59.85%), Query Frame = 2
Query:  146 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            P+D VP MG+RQ MNLL  G  +      L P A FF P   G   GGTTAKD +GN + A  WL+ H  GDR+L +GLKGDPTYL+V+ D  +   +        LGCVVPWNS   ++  PC G QY+ +G VVR
Sbjct:    6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANFFMPLRAGGGTGGTTAKDELGNAVTATGWLSNHPAGDRSLVQGLKGDPTYLIVDGDAAIG-NFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVR 140          
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROMS (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain AS9601) GN=petC PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.823e-28
Identity = 66/142 (46.48%), Postives = 86/142 (60.56%), Query Frame = 2
Query:  137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALT--LGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556
            T + ++ VP MG+RQ MNLL  G  +      L P A +F P   G  GGGT+AKD +GN I    WL TH  GDR+L +GLKGDPTYL+V +   +    +  L+A+   LGCVVPW+S   +F  PC G QY+ +G VVR
Sbjct:    2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIG---EFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVR 140          
The following BLAST results are available for this feature:
BLAST of EY679609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
UCRI_NOSP79.521e-3051.49Cytochrome b6-f complex iron-sulfur subunit OS=Nos... [more]
UCRI_MASLA9.521e-3049.25Cytochrome b6-f complex iron-sulfur subunit OS=Mas... [more]
UCRI_THEEB1.243e-2948.12Cytochrome b6-f complex iron-sulfur subunit OS=The... [more]
UCRI_SYNEL1.243e-2948.12Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRI_CYAP41.243e-2949.62Cytochrome b6-f complex iron-sulfur subunit OS=Cya... [more]
UCRI_PROMT2.770e-2947.14Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROM12.770e-2947.14Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROM41.375e-2848.18Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROMA3.063e-2848.18Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROMS6.823e-2846.48Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-B01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679609 ID=EY679609; Name=EY679609; organism=Citrus sinensis; type=EST; length=909bp
CCACGCGTCCGCTCCTTCTCAGCTATGCTCACGCAAGGGTGGTATGTTCT
GTCCATCAAGAGCTTTTCTTGTGAAACCAGCAAGGACCCAGATGGTGACA
AAGAATCCAATGGGAATGAAGATCAAGTGCCAGGCTACAAGTATTCCAGC
TGATAGAGTGCCTGATATGGGCAAGAGGCAGCTCATGAATTTGCTTCTCT
TGGGTGCTGTTTCTCTTCCCACTGGATTTATGTTGGTTCCTTATGCGACC
TTCTTTGCCCCACCTGGTTTAGGAAGTGCTGGTGGTGGTACTACTGCCAA
GGATGCCATTGGCAATGACATCATTGCCGCTGATTGGCTTAACACGCACG
GCCCTGGGGACCGAACCCTCACCGAAGGATTGAAGGGAGATCCCACCTAC
CTTGTTGTGGAACAAGACAAAACACTTGCCATCAAATGGAAATCAATGCT
GTCTGCACTCACCTTGGGATGTGTGGTGCCATGGAATTCCCCCAAAAAAA
GATTCAACTAACCCTGCACCGGATGCCAATACAATAAACATGGAACAGTT
GTGAGAAGGAACTGCACAATGTGACATGCGGATAGGACCATGACACACTC
TGAAATGAGTAAGGCAACTCACCATACACTAGACGGCAAACAATTACAGG
AATGCGAGAACCCCCAAGGCGGCGCAGAAACCCGGACACAGGGGCCTGGG
AAGAACGACAGACAAAAGACCGACCGCCGACAAGGAAAAATCAAAGCCGG
GCGGGAAAAAGAAAAAGGACGAGAGCAGCAAACACGGACAAGCATAACCC
AGATAATGAAGGCATCGATGAGCCACCGAAGCTCCACAGAAGAAAACCAC
CACCAACAGGACNCGAAAGAAACGACAAATAATACGAACTCATAAAGAGA
CGGGCAAGA
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