EY679602

Overview
NameEY679602
Unique NameEY679602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY679602_ssr211 microsatellite EY679602_ssr211:211..220. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBP4_BOVIN (Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 1.222e-17
Identity = 66/197 (33.50%), Postives = 97/197 (49.24%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++    G  +  PDL L GHQ    + L+  P    ++LS   D ++ LW +
Sbjct:   17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: CAF1_DROME (Probable histone-binding protein Caf1 OS=Drosophila melanogaster GN=Caf1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.222e-17
Identity = 65/198 (32.83%), Postives = 99/198 (50.00%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N L+IA+ ++  P   A    S ++ E +  F         ++    I H GEVNR R +PQN+ ++AT T S DVL++D    P++    G  + +PDL L GHQ    + L+  P    Y+LS   D ++ LW +
Sbjct:   21 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDE-QNHLLIASVQL--PSEDAQFDGSHYDNE-KGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSG--ECQPDLRLRGHQKEG-YGLSWNPNLNGYLLSASDDHTICLWDI 211          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: HAT2_CANGA (Histone acetyltransferase type B subunit 2 OS=Candida glabrata GN=HAT2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.596e-17
Identity = 60/191 (31.41%), Postives = 90/191 (47.12%), Query Frame = 2
Query:  128 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEV---VKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPY-VLSGGKDQSVVLWSV 688
            +VD+ Y  WKS VP+LYD+++   L WP+L+  W PQ      + RQ+L L   T G   N L I   ++   V         I + +E+     VK  K   H GE+ R R +PQ+  I+AT      + I+D  ++    A+L          L  H +N  + LA    E Y +LSG  D ++ LW +
Sbjct:   29 TVDEEYELWKSNVPMLYDFVSETRLTWPTLTVEWLPQKNLVAARTRQQLILGTHTSGEEQNYLKIGAVDLPVEVTENSKKDREIDEEDEDMVLSNVKIVKKFPHDGEITRARYMPQDDNIIATINGEGKIFIYD-RSKNGVEALLST--------LEYHTENG-YGLAFNANEKYSLLSGSDDSNIALWDI 209          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBP7_XENTR (Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.722e-17
Identity = 64/195 (32.82%), Postives = 92/195 (47.18%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    +L   T  S   N LV+A  ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++    G  D  PDL L GHQ              ++LS   D +V LW +
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQI--PNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSG--DCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDI 206          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: HAT2_NEUCR (Histone acetyltransferase type B subunit 2 OS=Neurospora crassa GN=hat-2 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.722e-17
Identity = 67/204 (32.84%), Postives = 101/204 (49.51%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSVPNTLVIANCEVVK-----PRVAAAE--HISQFNEEARS--PFVKKFK---TIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCP-TEPYVLSGGKDQSVVLWSVQEH 697
            +++ Y  WK   P LYD + +  L WP+L+ +W P ++    K+    RL L   T    PN L IA  E+ K     PR    E   I  +  +A S  P   +FK    I HPGEVN+ R  PQN  I+AT      VLI+D      +H++  +    P L L GH++   F L   P  E  +++G +D++V+LW ++ +
Sbjct:   26 INEEYKIWKKNSPFLYDMMLSTALEWPTLTTQWFPDVKNPKDKSHTVHRLLLGTHTAEGKPNYLQIAEVEIPKMVELNPRDYDEERGEIGGYGSKASSGEPLCIRFKITQKIDHPGEVNKARYQPQNPDIIATLAVDGRVLIFD----RTKHSITPSGTPSPQLELIGHKEEG-FGLNWNPHEEGCLVTGSEDKTVLLWDLKTY 224          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBP4_XENTR (Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.554e-17
Identity = 66/197 (33.50%), Postives = 96/197 (48.73%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++    G  +  PDL L GHQ    + L+  P     +LS   D ++ LW +
Sbjct:   17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLWDI 207          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBP4_PONAB (Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 4.642e-17
Identity = 65/197 (32.99%), Postives = 97/197 (49.24%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDQSVVLWSV 688
            +++ +  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++    G  +  PDL L GHQ    + L+  P    ++LS   D ++ LW +
Sbjct:   17 INEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 207          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBP4B_XENLA (Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-B PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 6.063e-17
Identity = 66/197 (33.50%), Postives = 96/197 (48.73%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++    G  +  PDL L GHQ    + L+  P     +LS   D ++ LW +
Sbjct:   17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLWDI 207          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBP7_XENLA (Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.063e-17
Identity = 64/195 (32.82%), Postives = 92/195 (47.18%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    +L   T  S   N LV+A  +V  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++    G  +  PDL L GHQ              ++LS   D +V LW +
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQV--PNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSG--ECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDI 206          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBP4_DANRE (Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 7.919e-17
Identity = 65/197 (32.99%), Postives = 96/197 (48.73%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T + DVL++D    P++    G  +  PDL L GHQ    + L+  P     +LS   D ++ LW +
Sbjct:   17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSG--ECTPDLRLRGHQKEG-YGLSWNPNLRSCLLSASDDHTICLWDI 207          
The following BLAST results are available for this feature:
BLAST of EY679602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
RBBP4_BOVIN1.222e-1733.50Histone-binding protein RBBP4 OS=Bos taurus GN=RBB... [more]
CAF1_DROME1.222e-1732.83Probable histone-binding protein Caf1 OS=Drosophil... [more]
HAT2_CANGA1.596e-1731.41Histone acetyltransferase type B subunit 2 OS=Cand... [more]
RBBP7_XENTR2.722e-1732.82Histone-binding protein RBBP7 OS=Xenopus tropicali... [more]
HAT2_NEUCR2.722e-1732.84Histone acetyltransferase type B subunit 2 OS=Neur... [more]
RBBP4_XENTR3.554e-1733.50Histone-binding protein RBBP4 OS=Xenopus tropicali... [more]
RBBP4_PONAB4.642e-1732.99Histone-binding protein RBBP4 OS=Pongo abelii GN=R... [more]
RBP4B_XENLA6.063e-1733.50Histone-binding protein RBBP4-B OS=Xenopus laevis ... [more]
RBBP7_XENLA6.063e-1732.82Histone-binding protein RBBP7 OS=Xenopus laevis GN... [more]
RBBP4_DANRE7.919e-1732.99Histone-binding protein RBBP4 OS=Danio rerio GN=rb... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679602 ID=EY679602; Name=EY679602; organism=Citrus sinensis; type=EST; length=979bp
CAAATAGAGACAAAAGCAGCAGCATAAGCAGAGGCGGGAAAGCCGAAAGC
ACAGGGAAAAAATTTAGAAAAGAAAAGGAAATAAGCAGAAGGGAAAAATG
AAGGAGGGACGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACACA
ATGGAAGTCCTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAACC
TCGTTTGGCCCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAGCT
ACATACAAGAATCGCCAACGTCTTTACCTTTCTGAACAGACGGATGGCAG
TGTTCCAAATACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCGAG
TTGCAGCTGCAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCACCC
TTTGTAAAGAAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGAAT
AAGAGAACTCCCACAGAACAGTAAAATAGTAGCCACACACACTGATAGTC
CTGATGTCCTCATTTGGGATGTTGAGGCACAACCTAATCGCCATGCTGTC
TTAGGAGCTGCTGATTCTCGTCCAGATCTGATATTGACCGGCCATCAAGA
TAATGCTGAATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCTCT
CTGGAGGCAAGGATCAGTCAGTGGTTTTATGGAGCGTCCAAGAACATGTC
TCGGCCTTGGCAGCAGAACCAGGTTCTGCAAAATCACCAGCTTCTGGTGG
TGCCAACTCTAAAAATGGCTTCCAAAAGTGGGGGGGAAGGGGGATAAACC
CTCAAAAAAAGCCCTTTCTTTTTGGGGCACCAAGGGAAAATACCTAGGGG
CAAGGAAAAACCCTGTTTGAAAAACCTTTCCTTTTTCGTTCCCTTCAAGG
GTTTTTTCTCCTTTTTTTTAACCCCGTGGCCTTTTGGGGGGCATATTGTA
GACCAAGGGGGGAAATTTTTTCCTTTTTT
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