EY679602

Overview
NameEY679602
Unique NameEY679602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY679602_ssr211 microsatellite EY679602_ssr211:211..220. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBP7_MACFA (Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.493e-15
Identity = 61/193 (31.61%), Postives = 88/193 (45.60%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +    G  +  PDL L GHQ              ++LS   D +V LW +
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDI 206          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBP7_HUMAN (Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.493e-15
Identity = 61/193 (31.61%), Postives = 88/193 (45.60%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +    G  +  PDL L GHQ              ++LS   D +V LW +
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDI 206          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: HAT2_USTMA (Histone acetyltransferase type B subunit 2 OS=Ustilago maydis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.493e-15
Identity = 61/209 (29.19%), Postives = 95/209 (45.45%), Query Frame = 2
Query:  134 DDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEH-------ISQFNEE-----------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCP-TEPYVLSGGKDQSVVLWSVQEH 697
            ++ Y  WK   P LYD +  H L WPSL+C+W P  E    ++  + RL L   T G   N L  A  ++       A +       + Q++E+           AR   V+K   I H GE+NR R  PQN  ++AT + +    I+D     N  +  G    RPD+IL G Q    + L+  P  + ++L+  +D +V  W +  +
Sbjct:   72 NEEYKIWKKNSPFLYDLVVTHALEWPSLTCQWLPDKESPAGQSYTQHRLLLGTHTSGQDQNYLQFAQVQLPTTGADGASNSAESRLDLKQYDEDKGEIGSYSATTARLSIVQK---INHDGEINRARYCPQNCDLIATRSVTGKTYIFDRTKHSNTPSADGVC--RPDIILEG-QHKEGYGLSWSPLKQGHILAASEDTTVCHWDINNY 274          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBD_DICDI (Probable histone-binding protein rbbD OS=Dictyostelium discoideum GN=rbbD PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.547e-15
Identity = 59/196 (30.10%), Postives = 92/196 (46.94%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEAR-------SPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCP-TEPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+  W P       K  + +++ L   T     N L++A   +     A+ E +   + +         S  ++  + I H GEVNR R +PQN  I+AT T S +V I+D    P      G     P+L LTGH+    + ++  P  E ++LS   DQS+ +W +
Sbjct:   13 INEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEKVILGTHTSDEEQNYLMVAKVHLPVDE-ASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCS--PNLKLTGHKKEG-YGISWNPRKEGHLLSCSDDQSICMWDI 204          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: LIN53_CAEBR (Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae GN=lin-53 PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 7.412e-15
Identity = 65/201 (32.34%), Postives = 91/201 (45.27%), Query Frame = 2
Query:  134 DDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDQSVVLWSVQEHVSA 706
            +D Y  WK   P LYD +  H L WPSLS +W P++E+ +  +   RL L   T     + L+   C    P   A    S+++ E        A +  V+    I H GEVNR R +PQ   I+AT + S DV I+D    P   +V       P L L GH     + L+  P  E  +LS   DQ+V  W +  +  A
Sbjct:   15 NDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKESSDHTVHRLILGTHTSDEQNHLLISKIC---MPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYP---SVPKDNTFNPLLKLKGHTKEG-YGLSWNPNKEGLILSASDDQTVCHWDINGNAGA 208          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBBP7_PONAB (Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.680e-15
Identity = 60/193 (31.09%), Postives = 87/193 (45.08%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDQSVVLWSV 688
            +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S  VL++D    P +    G  +  PDL L GHQ              ++LS   D +V LW +
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSG--ECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDI 206          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: HAT2_KLULA (Histone acetyltransferase type B subunit 2 OS=Kluyveromyces lactis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.826e-13
Identity = 60/200 (30.00%), Postives = 95/200 (47.50%), Query Frame = 2
Query:  128 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN-----RQRLYLSEQTDGSVPNTLVIA------NCEVVKPRVA-AAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDQSVVLWSV 688
            ++++ Y  W S VP++YD+++   L WPSL+ +W P   Q    +     RQ L +   T  + PN L IA      N    KP V+  A+     + +++   V+KFK   H  EV R R +PQ+  I+AT   +  V I+D   +   H  + +         + H++N  + LA  PT    +LS   D +V LW V
Sbjct:   12 TINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFK---HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIAS--------FSYHKENG-YGLAFNPTVSGQLLSASDDGTVALWDV 199          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: RBA1_CAEEL (Probable histone-binding protein rba-1 OS=Caenorhabditis elegans GN=rba-1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.183e-12
Identity = 53/189 (28.04%), Postives = 82/189 (43.39%), Query Frame = 2
Query:  152 WKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQA--TYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRV--------AAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDQSVVLWSV 688
            WK  VP LYD +    + WPSLS +W P + +   +  +  R+     T G V N L+I+   +             +  E    + E + + +  + K I HPGEV+R R +P N  I+A+   S DV I+D    P+          RP L L GH+            E ++L+ G D  +  W +
Sbjct:   17 WKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIK-INHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPK---DTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDI 201          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: LIN53_CAEEL (Probable histone-binding protein lin-53 OS=Caenorhabditis elegans GN=lin-53 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.183e-12
Identity = 62/197 (31.47%), Postives = 90/197 (45.69%), Query Frame = 2
Query:  134 DDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADS-RPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDQSVVLWSV 688
            +D Y  WK   P LYD +  H L WPSLS +W P + +    +   RL L   T     + L+   C    P   A    S+++ E RS +         V+    I H GEVNR R +PQ S I+AT +   DV I+D      +H+ +   ++  P + L GH     + L+  P  E  +LS   DQ+V  W +
Sbjct:   15 NDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHRLILGTHTSDEQNHLLISKIC---MPTDDAQFDASRYDTE-RSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDY----LKHSAVPRDNTFNPLIRLKGHTKEG-YGLSWNPNKEGLILSASDDQTVCHWDI 202          
BLAST of EY679602 vs. ExPASy Swiss-Prot
Match: YEC6_SCHPO (Uncharacterized WD repeat-containing protein C25H1.06 OS=Schizosaccharomyces pombe GN=SPAC25H1.06 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.308e-11
Identity = 45/167 (26.95%), Postives = 79/167 (47.31%), Query Frame = 2
Query:  131 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEA---------RSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQ 598
            + + + +WK     LY+ L    L WPSLS +W   +E  T K   + RL L       +PN L +A+ ++        + +  +NE+           S   +  + I+H G+VNR+R +PQN  I+AT +   +  I+D      ++  + A +  P++ L GH+
Sbjct:   20 ISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAAEGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFD----RTKYTSMPAEEFLPNISLIGHK 182          
The following BLAST results are available for this feature:
BLAST of EY679602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
RBBP7_MACFA1.493e-1531.61Histone-binding protein RBBP7 OS=Macaca fascicular... [more]
RBBP7_HUMAN1.493e-1531.61Histone-binding protein RBBP7 OS=Homo sapiens GN=R... [more]
HAT2_USTMA1.493e-1529.19Histone acetyltransferase type B subunit 2 OS=Usti... [more]
RBBD_DICDI2.547e-1530.10Probable histone-binding protein rbbD OS=Dictyoste... [more]
LIN53_CAEBR7.412e-1532.34Probable histone-binding protein lin-53 OS=Caenorh... [more]
RBBP7_PONAB9.680e-1531.09Histone-binding protein RBBP7 OS=Pongo abelii GN=R... [more]
HAT2_KLULA1.826e-1330.00Histone acetyltransferase type B subunit 2 OS=Kluy... [more]
RBA1_CAEEL1.183e-1228.04Probable histone-binding protein rba-1 OS=Caenorha... [more]
LIN53_CAEEL1.183e-1231.47Probable histone-binding protein lin-53 OS=Caenorh... [more]
YEC6_SCHPO1.308e-1126.95Uncharacterized WD repeat-containing protein C25H1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679602 ID=EY679602; Name=EY679602; organism=Citrus sinensis; type=EST; length=979bp
CAAATAGAGACAAAAGCAGCAGCATAAGCAGAGGCGGGAAAGCCGAAAGC
ACAGGGAAAAAATTTAGAAAAGAAAAGGAAATAAGCAGAAGGGAAAAATG
AAGGAGGGACGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACACA
ATGGAAGTCCTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAACC
TCGTTTGGCCCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAGCT
ACATACAAGAATCGCCAACGTCTTTACCTTTCTGAACAGACGGATGGCAG
TGTTCCAAATACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCGAG
TTGCAGCTGCAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCACCC
TTTGTAAAGAAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGAAT
AAGAGAACTCCCACAGAACAGTAAAATAGTAGCCACACACACTGATAGTC
CTGATGTCCTCATTTGGGATGTTGAGGCACAACCTAATCGCCATGCTGTC
TTAGGAGCTGCTGATTCTCGTCCAGATCTGATATTGACCGGCCATCAAGA
TAATGCTGAATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCTCT
CTGGAGGCAAGGATCAGTCAGTGGTTTTATGGAGCGTCCAAGAACATGTC
TCGGCCTTGGCAGCAGAACCAGGTTCTGCAAAATCACCAGCTTCTGGTGG
TGCCAACTCTAAAAATGGCTTCCAAAAGTGGGGGGGAAGGGGGATAAACC
CTCAAAAAAAGCCCTTTCTTTTTGGGGCACCAAGGGAAAATACCTAGGGG
CAAGGAAAAACCCTGTTTGAAAAACCTTTCCTTTTTCGTTCCCTTCAAGG
GTTTTTTCTCCTTTTTTTTAACCCCGTGGCCTTTTGGGGGGCATATTGTA
GACCAAGGGGGGAAATTTTTTCCTTTTTT
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