EY679598

Overview
NameEY679598
Unique NameEY679598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1037
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8615 contig Csv1_Contig8615:1..1037. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.831e-43
Identity = 94/150 (62.67%), Postives = 107/150 (71.33%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKRAYLPADEKLHSICTIPLPFVLRIGF 496
            GDQLAI KETGRRLGMGTNMYPSSALLGQ KD S+ +LP+DELIEKADGFAGVFPEHKYEIVKRLQ  KHI GMTGDGVNDAPALKK                    VLT+PGLSV+++AVLT R       K ++I  + +   + +GF
Sbjct:  512 GDQLAIGKETGRRLGMGTNMYPSSALLGQSKDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQR-MKNYTIYAVSITIRIVLGF 660          
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA8_ARATH (ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.123e-43
Identity = 92/150 (61.33%), Postives = 107/150 (71.33%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKRAYLPADEKLHSICTIPLPFVLRIGF 496
            GDQLAI  ETGRRLGMGTNMYPS++LLG  KDES+  +PIDELIEKADGFAGVFPEHKYEIVK+LQ  KHICGMTGDGVNDAPALKK                    VLT+PGLSV+++AVLT RA      K ++I  + +   + +GF
Sbjct:  515 GDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQR-MKNYTIYAVSITIRIVLGF 663          
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA1_ARATH (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 5.327e-43
Identity = 92/150 (61.33%), Postives = 108/150 (72.00%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKRAYLPADEKLHSICTIPLPFVLRIGF 496
            GDQLAI KETGRRLGMGTNMYPS+ALLG DKD +IA++P++ELIEKADGFAGVFPEHKYEIVK+LQ  KHI GMTGDGVNDAPALKK                    VLT+PGLSV+++AVLT RA      K ++I  + +   +  GF
Sbjct:  512 GDQLAIGKETGRRLGMGTNMYPSAALLGTDKDSNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQR-MKNYTIYAVSITIRIVFGF 660          
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA3_ARATH (ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 9.086e-43
Identity = 90/150 (60.00%), Postives = 109/150 (72.67%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKRAYLPADEKLHSICTIPLPFVLRIGF 496
            GDQLAI KETGRRLGMG+NMYPSS+LLG+ KDE++A +P+++LIEKADGFAGVFPEHKYEIVK+LQ  KHICGMTGDGVNDAPALKK                    VLT+PGLSV+++AVLT RA      K ++I  + +   +  GF
Sbjct:  513 GDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQR-MKNYTIYAVSITIRIVFGF 661          
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA10_ARATH (ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 2.892e-42
Identity = 86/126 (68.25%), Postives = 94/126 (74.60%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKRA 424
            GDQLAI KETGRRLGMGTNMYPSS+LLG + DE   A+P+DELIE ADGFAGVFPEHKYEIVK LQ  KH+ GMTGDGVNDAPALKK                    VLTDPGLSV+++AVLT RA
Sbjct:  520 GDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADATDAARSSADIVLTDPGLSVIISAVLTSRA 644          

HSP 2 Score: 29.6462 bits (65), Expect = 2.892e-42
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  426 IFQRMKNYTVYALS 467
            IFQRM+NYTVYA+S
Sbjct:  645 IFQRMRNYTVYAVS 658          
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA2_ARATH (ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 3.453e-42
Identity = 91/150 (60.67%), Postives = 107/150 (71.33%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKRAYLPADEKLHSICTIPLPFVLRIGF 496
            GDQLAI KETGRRLGMGTNMYPSSALLG  KD ++A++P++ELIEKADGFAGVFPEHKYEIVK+LQ  KHI GMTGDGVNDAPALKK                    VLT+PGLSV+++AVLT RA      K ++I  + +   +  GF
Sbjct:  512 GDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQR-MKNYTIYAVSITIRIVFGF 660          
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA6_ARATH (ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 7.200e-40
Identity = 88/150 (58.67%), Postives = 107/150 (71.33%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKRAYLPADEKLHSICTIPLPFVLRIGF 496
            GDQLAI KETGRRLGMGTNMYPSS+LL ++KD++   +P+DELIEKADGFAGVFPEHKYEIV++LQ  KHI GMTGDGVNDAPALKK                    VLT+PGLSV+++AVLT RA      K ++I  + +   + +GF
Sbjct:  515 GDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQR-MKNYTIYAVSITIRIVLGF 662          
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA7_ARATH (ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=AHA7 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.604e-39
Identity = 88/150 (58.67%), Postives = 104/150 (69.33%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKRAYLPADEKLHSICTIPLPFVLRIGF 496
            GDQLAI KETGRRLGMGTNMYPSS+LL  +  E ++   +DELIE ADGFAGVFPEHKYEIVKRLQ+ KHICGMTGDGVNDAPALKK                    VLT+PGLSV+++AVLT RA      K ++I  + +   + +GF
Sbjct:  515 GDQLAIAKETGRRLGMGTNMYPSSSLLSDNNTEGVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIGIAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQR-MKNYTIYAVSITIRIVMGF 660          
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA1_DICDI (Probable plasma membrane ATPase OS=Dictyostelium discoideum GN=patB PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 7.889e-25
Identity = 60/125 (48.00%), Postives = 76/125 (60.80%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKR 421
            GDQLAI KET RRLGMG N++    L   D       +   E+IE ADGFA ++PEHKY++V +LQ  KH+ GMTGDGVNDAPALKK                    VLT  GLSV+++A+++ R
Sbjct:  657 GDQLAIAKETARRLGMGGNLFTIPYLENND-----LGISEGEVIEMADGFAEMWPEHKYKVVDQLQKRKHVVGMTGDGVNDAPALKKAQIGIAVAGATDAARSVSDIVLTSSGLSVIIDAIISSR 776          

HSP 2 Score: 25.0238 bits (53), Expect = 7.889e-25
Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  426 IFQRMKNYTVYALS 467
            IFQRM+NY +Y+++
Sbjct:  778 IFQRMRNYVIYSVA 791          
BLAST of EY679598 vs. ExPASy Swiss-Prot
Match: PMA1_DUNBI (Plasma membrane ATPase OS=Dunaliella bioculata GN=PMA1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.997e-23
Identity = 59/128 (46.09%), Postives = 74/128 (57.81%), Query Frame = 2
Query:   47 GDQLAIRKETGRRLGMGTNMYPSSALL---GQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQATKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTDPGLSVLLNAVLTKR 421
            GD L I KET + LGMGT M+PS  ++     D  +        E++E  +GFA VFPEHK+EIVK LQ + H+ GMTGDGVNDAPALKK                    VLT+PGLS ++ AV+  R
Sbjct:  536 GDHLLIGKETAKMLGMGTEMFPSEVMIKARNGDASQLHGYKNFVEMVETCNGFAQVFPEHKFEIVKILQDSNHVVGMTGDGVNDAPALKKADVGVAVADATDAARGAADIVLTEPGLSTIVTAVIGAR 663          
The following BLAST results are available for this feature:
BLAST of EY679598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
PMA1_WHEAT1.831e-4362.67Plasma membrane ATPase OS=Triticum aestivum GN=ha1... [more]
PMA8_ARATH3.123e-4361.33ATPase 8, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ARATH5.327e-4361.33ATPase 1, plasma membrane-type OS=Arabidopsis thal... [more]
PMA3_ARATH9.086e-4360.00ATPase 3, plasma membrane-type OS=Arabidopsis thal... [more]
PMA10_ARATH2.892e-4268.25ATPase 10, plasma membrane-type OS=Arabidopsis tha... [more]
PMA2_ARATH3.453e-4260.67ATPase 2, plasma membrane-type OS=Arabidopsis thal... [more]
PMA6_ARATH7.200e-4058.67ATPase 6, plasma membrane-type OS=Arabidopsis thal... [more]
PMA7_ARATH1.604e-3958.67ATPase 7, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_DICDI7.889e-2548.00Probable plasma membrane ATPase OS=Dictyostelium d... [more]
PMA1_DUNBI7.997e-2346.09Plasma membrane ATPase OS=Dunaliella bioculata GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-A01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679598 ID=EY679598; Name=EY679598; organism=Citrus sinensis; type=EST; length=1037bp
CAGGGTACACCGGGGTCCGGAATTCCCCGGGTCCACCCCGCGTCCGGGAG
ATCAACTGGCAATACGAAAGGAGACTGGACGTCGTTTGGGAATGGGAACC
AACATGTATCCTTCATCTGCTTTGCTAGGACAGGACAAGGATGAGTCTAT
CGCTGCTTTACCTATTGATGAACTGATAGAAAAAGCTGACGGCTTTGCTG
GTGTCTTCCCTGAACACAAGTATGAGATAGTAAAACGCTTACAAGCTACG
AAACATATATGTGGGATGACTGGTGATGGTGTCAACGATGCTCCTGCTCT
CAAGAAGGCTGACATTGGGATAGCCGTTGCGGATGCAACTGATGCTGCTC
GTAGTGCTTCTGACATAGTCCTTACAGACCCTGGCCTTAGTGTCCTCCTC
AATGCTGTCTTGACCAAACGAGCCTATCTTCCAGCGGATGAAAAATTACA
CAGTATATGCACTATCCCATTACCATTCGTATTGAGGATTGGTTTCAAGC
CGGCTGGCACAGACAGAGAACTTGCAACTTTCCTCCCGACACGGCGCGAC
CCCTACCGCAAGAGAACGGGAGACAGAAGCAAAGACAAAAAAAAAGAGCC
AGCACCACCCGGACCCGCTCAGACCAACAAGCAACCACCAAGAACACAGA
CGCAACGCGGCCATAGAACAAAAAAACAGAACGCAACGCAAACGAGGGCG
AGCACGAGGGGACACCAAAGACACGACAAGCAAGAACGAAGAGGGAGACG
CGAGGGAACCAGGACAGCACGCGAAGCACACGGCCACCGAGAAGACACGG
AGCGACCCAACAGGAGGCGAAAGCGCAGCGAGGGAAGCAGGCACGCACAA
AACGAACGCAGGGAGCACACCAGAAAGTAAGAACAAGGGACCAAAAAAAC
GAAAAACGACGCAGACACAGCCAGAACACAAACCACAAGGCACACACCAC
CAAGGAAACACAACGAAACGCACCCGAACACACGACACAAAACCCCACGA
CCCAGTGAAACACCAAGCCGCAAAGTGAACGACGAAG
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