EY679594

Overview
NameEY679594
Unique NameEY679594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.004e-20
Identity = 72/206 (34.95%), Postives = 101/206 (49.03%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRISCVLGWWC*ARN*CLQSIGTWSLWYIYLDDQWCTHLAAGGKERG*KSTRDAAWRNFELPMALMGCRSL 647
            RAE  GFKA+ +T+DTP LG R  D +N+  L   + LK+ + L   K ++   S   ++       S  W D+  LQ+IT+LPI++KG+LT ED              SNHG RQLD V A+I AL EVV A +G+I   +          L+++   +   I+L       LA  G E G K   D         M L GC+S+
Sbjct:  144 RAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRAL---KEEKPTQSVPVSFPKA----SFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGAR-CIFLGRPILWGLACKG-EDGVKEVLDILTAELHRCMTLSGCQSV 340          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.321e-19
Identity = 73/206 (35.44%), Postives = 99/206 (48.06%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRISCVLGWWC*ARN*CLQSIGTWSLWYIYLDDQWCTHLAAGGKERG*KSTRDAAWRNFELPMALMGCRSL 647
            R E  GFKA+ +TVD P LG R  + ++   L   + LK+ +     K      SGL   ++     S  W D+  LQ++T+LPI++KG+LT ED              SNHG RQLD VPA+I AL EVV A  G+I   +       N  L+++   +   I+L       LA  G E G K   D         MAL GCRS+
Sbjct:  144 RIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESK------SGLPTPLS-MPSSSSCWNDLPLLQSMTRLPIILKGILTKEDAELAVKHNIRGIIVSNHGGRQLDEVPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKALALGAR-CIFLGRPIIWGLACKG-EDGVKEVLDILKEELHTCMALSGCRSV 340          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPW (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain W619) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.028e-16
Identity = 49/157 (31.21%), Postives = 71/157 (45.22%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQG 437
            RA+ AG K +  TVD P  G R  D              +    T P +       G   DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V ++  AL  +  A +G
Sbjct:  143 RAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGANGPMRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGSNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKG 299          

HSP 2 Score: 38.1206 bits (87), Expect = 1.028e-16
Identity = 20/62 (32.26%), Postives = 33/62 (53.23%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQL--EGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + I       +W L   G+ GV+ +LE+   E+
Sbjct:  297 VKGDLKILADSGIRSGLDVVRMIALGADTVLI---GRAFLWALAVHGQAGVKNLLELFEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.258e-16
Identity = 49/160 (30.63%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SW+D+ W++   K P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I+
Sbjct:  143 RAQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRMLQAVTHPQWAWDVGLNGKPHDLGNVSAYRGKPTTLEDYIGWLAANFDPSISWQDLAWIREFWKGPMIIKGILDPEDAKEAVRFGADGIVVSNHGGRQLDGVLSTAHALPAIADAVKGDIT 302          

HSP 2 Score: 34.6538 bits (78), Expect = 2.258e-16
Identity = 18/60 (30.00%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA G+ +   + V      G+ GV  +L ++  E+
Sbjct:  297 VKGDITILADSGIRSGLDVVRMIALGADGVML-GRAFVYALAAAGEAGVVNLLNLIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.816e-16
Identity = 45/163 (27.61%), Postives = 74/163 (45.40%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG--------------LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRISCVL 455
            RA+ AG K +  TVD P  G R  D+ +  + P     +  Q +       D+G + + +D G                 ++    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V +T+ AL  +  A +G +  ++
Sbjct:  143 RAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLGNISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGVLSTVQALPAIADAVKGDLKILV 305          

HSP 2 Score: 34.2686 bits (77), Expect = 3.816e-16
Identity = 18/60 (30.00%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   + +D G+R G DV + LALGA    +   S +     +G+ GV  +L++   E+
Sbjct:  297 VKGDLKILVDSGIRTGLDVVRMLALGADCTML-GRSFIYALAAQGRAGVENLLDLYEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.816e-16
Identity = 45/163 (27.61%), Postives = 74/163 (45.40%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG--------------LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRISCVL 455
            RA+ AG K +  TVD P  G R  D+ +  + P     +  Q +       D+G + + +D G                 ++    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V +T+ AL  +  A +G +  ++
Sbjct:  143 RAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLGNISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGVLSTVQALPAIADAVKGDLKILV 305          

HSP 2 Score: 34.2686 bits (77), Expect = 3.816e-16
Identity = 18/60 (30.00%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   + +D G+R G DV + LALGA    +   S +     +G+ GV  +L++   E+
Sbjct:  297 VKGDLKILVDSGIRTGLDVVRMLALGADCTML-GRSFIYALAAQGRAGVENLLDLYEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA7 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain PA7) GN=lldD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.958e-16
Identity = 46/160 (28.75%), Postives = 70/160 (43.75%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G ++
Sbjct:  143 RAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISTYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWNGPMVIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELA 302          

HSP 2 Score: 37.7354 bits (86), Expect = 4.958e-16
Identity = 19/60 (31.67%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + +   + V      G+ GVR +LE++  E+
Sbjct:  297 VKGELAILADSGIRTGLDVVRMIALGADSVLL-GRAFVYALAAAGEAGVRNLLELIEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.959e-16
Identity = 47/160 (29.38%), Postives = 72/160 (45.00%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSGLAAYVAGQ--------------IDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIS 446
            RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G  +   G+               D S+SWKD+ W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  + +A +G I+
Sbjct:  143 RAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAVRRMLQAVTHPQWAWDVGLCGKPHDLGNVSAYRGKPTSLEDYIGWLGTNFDPSISWKDLDWIREFWQGPMIIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSTAHALPAIAEAVKGDIT 302          

HSP 2 Score: 35.8094 bits (81), Expect = 4.959e-16
Identity = 18/60 (30.00%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA G+ +       +    G+ GV  +LE++  E+
Sbjct:  297 VKGDITLLADSGIRSGLDVVRMIALGADGVLLGRAFAYAL-AAAGQAGVANLLELIDKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_PSEE4 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas entomophila (strain L48) GN=lldD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.444e-16
Identity = 49/159 (30.82%), Postives = 74/159 (46.54%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRI 443
            RA+ AG K +  TVD P  G R  D  +  + P     + +Q +                DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V ++  AL  +  A +G I
Sbjct:  143 RAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAPLRRVWQAMTHPQWALDVGLLGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDI 301          

HSP 2 Score: 32.3426 bits (72), Expect = 6.444e-16
Identity = 17/60 (28.33%), Postives = 31/60 (51.67%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + I   + +      G+ GV+ +L +   E+
Sbjct:  297 VKGDIKILADSGIRSGLDVVRMIALGADTVLI-GRAFLYALATHGEAGVKNLLALFEKEM 355          
BLAST of EY679594 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPK (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain KT2440) GN=lldD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.444e-16
Identity = 49/157 (31.21%), Postives = 71/157 (45.22%), Query Frame = 3
Query:   30 RAERAGFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQG 437
            RA+ AG K +  TVD P  G R  D              +    T P +       G   DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V ++  AL  +  A +G
Sbjct:  143 RAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKG 299          

HSP 2 Score: 35.4242 bits (80), Expect = 6.444e-16
Identity = 18/60 (30.00%), Postives = 33/60 (55.00%), Query Frame = 1
Query:  430 LRGVFPVFLDGGVRRGTDVFKALALGASGIFIWTTSGVLIWQLEGKKGVRRVLEMLRGEI 609
            ++G   +  D G+R G DV + +ALGA  + I   + +    + G+ GV+ +LE+   E+
Sbjct:  297 VKGDLKILADSGIRSGLDVVRMIALGADTVLI-GRAFLYALAVHGQAGVKNLLELFEKEM 355          
The following BLAST results are available for this feature:
BLAST of EY679594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
HAOX2_RAT3.004e-2034.95Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
HAOX2_MOUSE3.321e-1935.44Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
LLDD_PSEPW1.028e-1631.21L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ERWCT2.258e-1630.63L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_VIBCM3.816e-1627.61L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_VIBCH3.816e-1627.61L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_PSEA74.958e-1628.75L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_SERP54.959e-1629.38L-lactate dehydrogenase [cytochrome] OS=Serratia p... [more]
LLDD_PSEE46.444e-1630.82L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEPK6.444e-1631.21L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-H09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679594 ID=EY679594; Name=EY679594; organism=Citrus sinensis; type=EST; length=896bp
CAGGAATGTGGTTGCTCAGCTTCTGTATAAGGGCTGAAAGAGCCGGATTC
AAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGC
TGACATCAAGAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATT
TTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTT
GCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGT
GAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTGTAC
TCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGGATT
ATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCACTAT
CATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTTCCTGTG
TTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCATTGGC
ACTTGGAGCCTCTGGTATATTTATTTGGACGACCAGTGGTGTACTCATTT
GGCAGCTGGAGGGAAAGAAAGGGGTTAGAAGAGTACTCGAGATGCTGCGT
GGAGAAATTTTGAACTACCAATGGCACTAATGGGTTGCCGCTCACTCAAA
AAGAATTTACTCGGGATCACATCGTCCCTGAAAGGGGAAGCTTCCTCTCC
CTCCCCCCGGTTCCCAGGGTAAAAGTTCCCTGGCAGGGCAAATAAAAAAA
AAAAAACAAAAAATTTTGGGTTAACTTTTTTTTTAATTTCTTTTTTTTGG
GAAAAATTTGGTTTAGGGGTTTAATTGGGGTCCTGAAATTATTTTTTAAA
CCTTCCGGGTAAAAGAAGAAAATAAGGGGGCACCCTTCTGGCCCCC
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